RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 IGKV1D-16P01601 117 aa12.4□□□□□ -0.42
SYNE3-201ENST00000334258 CEACAM5P06731 702 aa12.4□□□□□ -0.42
SYNE3-201ENST00000334258 SCAND1P57086 179 aa12.4□□□□□ -0.42
SYNE3-201ENST00000334258 PEA15Q15121 130 aa12.4□□□□□ -0.42
SYNE3-201ENST00000334258 WDR38Q5JTN6 314 aa12.4□□□□□ -0.42
SYNE3-201ENST00000334258 DHRS7BQ6IAN0 325 aaPredicted RBP12.4□□□□□ -0.42
SYNE3-201ENST00000334258 PGAP1Q75T13 922 aa12.4□□□□□ -0.42
SYNE3-201ENST00000334258 ZNF595Q8IYB9 648 aa12.4□□□□□ -0.42
SYNE3-201ENST00000334258 OR4K17Q8NGC6 315 aa12.4□□□□□ -0.42
SYNE3-201ENST00000334258 OR5AP2Q8NGF4 316 aa12.4□□□□□ -0.42
SYNE3-201ENST00000334258 RNF141Q8WVD5 230 aa12.4□□□□□ -0.42
SYNE3-201ENST00000334258 HDAC8Q9BY41 377 aa12.4□□□□□ -0.42
SYNE3-201ENST00000334258 CST11Q9H112 138 aa12.4□□□□□ -0.42
SYNE3-201ENST00000334258 SYT4Q9H2B2 425 aa12.4□□□□□ -0.42
SYNE3-201ENST00000334258 A0A1B0GTI1 187 aa12.4□□□□□ -0.43
SYNE3-201ENST00000334258 AGPAT2O15120 278 aa12.4□□□□□ -0.43
SYNE3-201ENST00000334258 SLC31A1O15431 190 aa12.4□□□□□ -0.43
SYNE3-201ENST00000334258 FGF19O95750 216 aa12.4□□□□□ -0.43
SYNE3-201ENST00000334258 IFNA4P05014 189 aa12.4□□□□□ -0.43
SYNE3-201ENST00000334258 HEXBP07686 556 aa12.4□□□□□ -0.43
SYNE3-201ENST00000334258 RAB5BP61020 215 aa12.4□□□□□ -0.43
SYNE3-201ENST00000334258 SQSTM1Q13501 440 aa12.4□□□□□ -0.43
SYNE3-201ENST00000334258 EIF2B1Q14232 305 aaKnown RBP12.4□□□□□ -0.43
SYNE3-201ENST00000334258 KLHL26Q53HC5 615 aa12.4□□□□□ -0.43
SYNE3-201ENST00000334258 BAP18Q8IXM2 172 aa12.4□□□□□ -0.43
SYNE3-201ENST00000334258 PRSS35Q8N3Z0 413 aa12.4□□□□□ -0.43
SYNE3-201ENST00000334258 RBM18Q96H35 190 aaKnown RBP12.4□□□□□ -0.43
SYNE3-201ENST00000334258 DCBLD2Q96PD2 775 aa12.4□□□□□ -0.43
SYNE3-201ENST00000334258 STARD5Q9NSY2 213 aa12.4□□□□□ -0.43
SYNE3-201ENST00000334258 ABHD16AO95870 558 aa12.39□□□□□ -0.43
SYNE3-201ENST00000334258 PVRP15151 417 aa12.39□□□□□ -0.43
SYNE3-201ENST00000334258 FCARP24071 287 aa12.39□□□□□ -0.43
SYNE3-201ENST00000334258 PTGFRP43088 359 aa12.39□□□□□ -0.43
SYNE3-201ENST00000334258 PSG6Q00889 435 aa12.39□□□□□ -0.43
SYNE3-201ENST00000334258 ELOCQ15369 112 aa12.39□□□□□ -0.43
SYNE3-201ENST00000334258 MEP1BQ16820 701 aa12.39□□□□□ -0.43
SYNE3-201ENST00000334258 POMZP3Q6PJE2 187 aa12.39□□□□□ -0.43
SYNE3-201ENST00000334258 ACBD4Q8NC06 268 aa12.39□□□□□ -0.43
SYNE3-201ENST00000334258 MOGAT1Q96PD6 335 aa12.39□□□□□ -0.43
SYNE3-201ENST00000334258 OR2A5Q96R48 311 aa12.39□□□□□ -0.43
SYNE3-201ENST00000334258 INTS14Q96SY0 518 aa12.39□□□□□ -0.43
SYNE3-201ENST00000334258 CHMP1AQ9HD42 196 aaPredicted RBP12.39□□□□□ -0.43
SYNE3-201ENST00000334258 LRIT1Q9P2V4 623 aa12.39□□□□□ -0.43
SYNE3-201ENST00000334258 KCNG2Q9UJ96 466 aa12.39□□□□□ -0.43
SYNE3-201ENST00000334258 DHDHQ9UQ10 334 aa12.39□□□□□ -0.43
SYNE3-201ENST00000334258 CSAG2Q9Y5P2 127 aa12.39□□□□□ -0.43
SYNE3-201ENST00000334258 KIAA1549LQ6ZVL6 1849 aa12.39□□□□□ -0.43
SYNE3-201ENST00000334258 CPED1A4D0V7 1026 aa12.39□□□□□ -0.43
SYNE3-201ENST00000334258 GPR89AB7ZAQ6 455 aa12.39□□□□□ -0.43
SYNE3-201ENST00000334258 NKX2-2O95096 273 aa12.39□□□□□ -0.43
SYNE3-201ENST00000334258 CD2P06729 351 aa12.39□□□□□ -0.43
SYNE3-201ENST00000334258 GPR89BP0CG08 455 aa12.39□□□□□ -0.43
SYNE3-201ENST00000334258 HTR2CP28335 458 aa12.39□□□□□ -0.43
SYNE3-201ENST00000334258 DRD3P35462 400 aa12.39□□□□□ -0.43
SYNE3-201ENST00000334258 MICBQ29980 383 aa12.39□□□□□ -0.43
SYNE3-201ENST00000334258 PAPD4Q6PIY7 484 aaKnown RBP12.39□□□□□ -0.43
SYNE3-201ENST00000334258 DGAT2L6Q6ZPD8 337 aa12.39□□□□□ -0.43
SYNE3-201ENST00000334258 ZNF761Q86XN6 746 aaPredicted RBP12.39□□□□□ -0.43
SYNE3-201ENST00000334258 OR4C3Q8NH37 302 aa12.39□□□□□ -0.43
SYNE3-201ENST00000334258 ELP5Q8TE02 316 aa12.39□□□□□ -0.43
SYNE3-201ENST00000334258 SPACA7Q96KW9 195 aa12.39□□□□□ -0.43
SYNE3-201ENST00000334258 C4orf45Q96LM5 186 aa12.39□□□□□ -0.43
SYNE3-201ENST00000334258 AMELYQ99218 206 aa12.39□□□□□ -0.43
SYNE3-201ENST00000334258 ELF4Q99607 663 aaPredicted RBP12.39□□□□□ -0.43
SYNE3-201ENST00000334258 POLE3Q9NRF9 147 aa12.39□□□□□ -0.43
SYNE3-201ENST00000334258 UQCC1Q9NVA1 299 aa12.39□□□□□ -0.43
SYNE3-201ENST00000334258 TBC1D29Q9UFV1 150 aa12.39□□□□□ -0.43
SYNE3-201ENST00000334258 VSIG4Q9Y279 399 aa12.39□□□□□ -0.43
SYNE3-201ENST00000334258 TBC1D3IA0A087WXS9 549 aa12.38□□□□□ -0.43
SYNE3-201ENST00000334258 OR2T1O43869 369 aa12.38□□□□□ -0.43
SYNE3-201ENST00000334258 PRKNO60260 465 aaPredicted RBP12.38□□□□□ -0.43
SYNE3-201ENST00000334258 OR6A2O95222 327 aa12.38□□□□□ -0.43
SYNE3-201ENST00000334258 RENP00797 406 aa12.38□□□□□ -0.43
SYNE3-201ENST00000334258 HPGDP15428 266 aa12.38□□□□□ -0.43
SYNE3-201ENST00000334258 ALOX5APP20292 161 aa12.38□□□□□ -0.43
SYNE3-201ENST00000334258 PNLIPRP2P54317 469 aa12.38□□□□□ -0.43
SYNE3-201ENST00000334258 FIGLAQ6QHK4 219 aa12.38□□□□□ -0.43
SYNE3-201ENST00000334258 LYG2Q86SG7 212 aa12.38□□□□□ -0.43
SYNE3-201ENST00000334258 CDC20BQ86Y33 519 aa12.38□□□□□ -0.43
SYNE3-201ENST00000334258 OR13C8Q8NGS7 320 aa12.38□□□□□ -0.43
SYNE3-201ENST00000334258 MCHR2Q969V1 340 aa12.38□□□□□ -0.43
SYNE3-201ENST00000334258 TMED7Q9Y3B3 224 aa12.38□□□□□ -0.43
SYNE3-201ENST00000334258 TMEM14AQ9Y6G1 99 aa12.38□□□□□ -0.43
SYNE3-201ENST00000334258 EML2O95834 649 aa12.38□□□□□ -0.43
SYNE3-201ENST00000334258 IFNA6P05013 189 aa12.38□□□□□ -0.43
SYNE3-201ENST00000334258 KIR3DL2P43630 455 aa12.38□□□□□ -0.43
SYNE3-201ENST00000334258 SSBP1Q04837 148 aaKnown RBP12.38□□□□□ -0.43
SYNE3-201ENST00000334258 SPOCK1Q08629 439 aa12.38□□□□□ -0.43
SYNE3-201ENST00000334258 SRSF5Q13243 272 aaKnown RBP12.38□□□□□ -0.43
SYNE3-201ENST00000334258 GPR18Q14330 331 aa12.38□□□□□ -0.43
SYNE3-201ENST00000334258 LINC00114Q6XXX2 140 aa12.38□□□□□ -0.43
SYNE3-201ENST00000334258 NT5CQ8TCD5 201 aa12.38□□□□□ -0.43
SYNE3-201ENST00000334258 SLC22A18Q96BI1 424 aa12.38□□□□□ -0.43
SYNE3-201ENST00000334258 C8orf33Q9H7E9 229 aaPredicted RBP12.38□□□□□ -0.43
SYNE3-201ENST00000334258 MEX3AA1L020 520 aaKnown RBP12.38□□□□□ -0.43
SYNE3-201ENST00000334258 H0YGG7 62 aa12.38□□□□□ -0.43
SYNE3-201ENST00000334258 PSMB6P28072 239 aa12.38□□□□□ -0.43
SYNE3-201ENST00000334258 SDHAP31040 664 aa12.38□□□□□ -0.43
SYNE3-201ENST00000334258 P2RY4P51582 365 aa12.38□□□□□ -0.43
SYNE3-201ENST00000334258 ARF3P61204 181 aaPredicted RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms