RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 MYO7BQ6PIF6 2116 aa11.06□□□□□ -0.64
VPS33B-201ENST00000333371 IGLV1-36A0A0B4J1U3 117 aa11.05□□□□□ -0.64
VPS33B-201ENST00000333371 A0A1W2PPC1 479 aa11.05□□□□□ -0.64
VPS33B-201ENST00000333371 TUBAL3A6NHL2 446 aa11.05□□□□□ -0.64
VPS33B-201ENST00000333371 METTL12A8MUP2 240 aa11.05□□□□□ -0.64
VPS33B-201ENST00000333371 A8MXK9 166 aa11.05□□□□□ -0.64
VPS33B-201ENST00000333371 EIF1AYO14602 144 aaKnown RBP11.05□□□□□ -0.64
VPS33B-201ENST00000333371 SLC25A12O75746 678 aa11.05□□□□□ -0.64
VPS33B-201ENST00000333371 ITGB2P05107 769 aa11.05□□□□□ -0.64
VPS33B-201ENST00000333371 HTR2CP28335 458 aa11.05□□□□□ -0.64
VPS33B-201ENST00000333371 MPGP29372 298 aa11.05□□□□□ -0.64
VPS33B-201ENST00000333371 IL12BP29460 328 aa11.05□□□□□ -0.64
VPS33B-201ENST00000333371 RORAP35398 523 aa11.05□□□□□ -0.64
VPS33B-201ENST00000333371 RPL27P61353 136 aaKnown RBP11.05□□□□□ -0.64
VPS33B-201ENST00000333371 LRFN4Q6PJG9 635 aa11.05□□□□□ -0.64
VPS33B-201ENST00000333371 HDDC2Q7Z4H3 204 aa11.05□□□□□ -0.64
VPS33B-201ENST00000333371 IQCF2Q8IXL9 164 aa11.05□□□□□ -0.64
VPS33B-201ENST00000333371 ZNF721Q8TF20 911 aa11.05□□□□□ -0.64
VPS33B-201ENST00000333371 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.05□□□□□ -0.64
VPS33B-201ENST00000333371 LAT2Q9GZY6 243 aa11.05□□□□□ -0.64
VPS33B-201ENST00000333371 C12orf4Q9NQ89 552 aa11.05□□□□□ -0.64
VPS33B-201ENST00000333371 KLK13Q9UKR3 277 aa11.05□□□□□ -0.64
VPS33B-201ENST00000333371 RALGAPA1Q6GYQ0 2036 aa11.05□□□□□ -0.64
VPS33B-201ENST00000333371 TRAV36DV7A0A075B6V5 113 aa11.05□□□□□ -0.64
VPS33B-201ENST00000333371 WIPF3A6NGB9 483 aa11.05□□□□□ -0.64
VPS33B-201ENST00000333371 SDC3O75056 442 aa11.05□□□□□ -0.64
VPS33B-201ENST00000333371 TEX30Q5JUR7 227 aa11.05□□□□□ -0.64
VPS33B-201ENST00000333371 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.05□□□□□ -0.64
VPS33B-201ENST00000333371 ATPAF1Q5TC12 328 aaPredicted RBP11.05□□□□□ -0.64
VPS33B-201ENST00000333371 SLC18B1Q6NT16 456 aa11.05□□□□□ -0.64
VPS33B-201ENST00000333371 CDH26Q8IXH8 852 aa11.05□□□□□ -0.64
VPS33B-201ENST00000333371 C12orf45Q8N5I9 185 aaPredicted RBP11.05□□□□□ -0.64
VPS33B-201ENST00000333371 BVESQ8NE79 360 aa11.05□□□□□ -0.64
VPS33B-201ENST00000333371 STEAP2Q8NFT2 490 aa11.05□□□□□ -0.64
VPS33B-201ENST00000333371 ZNF519Q8TB69 540 aa11.05□□□□□ -0.64
VPS33B-201ENST00000333371 FAM46BQ96A09 425 aa11.05□□□□□ -0.64
VPS33B-201ENST00000333371 SLC41A2Q96JW4 573 aa11.05□□□□□ -0.64
VPS33B-201ENST00000333371 ZNF578Q96N58 590 aaPredicted RBP11.05□□□□□ -0.64
VPS33B-201ENST00000333371 ZNF587Q96SQ5 575 aaPredicted RBP11.05□□□□□ -0.64
VPS33B-201ENST00000333371 SLC6A7Q99884 636 aa11.05□□□□□ -0.64
VPS33B-201ENST00000333371 FOXQ1Q9C009 403 aa11.05□□□□□ -0.64
VPS33B-201ENST00000333371 B3GNT4Q9C0J1 378 aa11.05□□□□□ -0.64
VPS33B-201ENST00000333371 PLCL2Q9UPR0 1127 aa11.05□□□□□ -0.64
VPS33B-201ENST00000333371 TRIOBPQ9H2D6 2365 aa11.05□□□□□ -0.64
VPS33B-201ENST00000333371 IGKV1D-43A0A0B4J1Z2 117 aa11.05□□□□□ -0.64
VPS33B-201ENST00000333371 TMEM127O75204 238 aa11.05□□□□□ -0.64
VPS33B-201ENST00000333371 IGKV3-11P04433 115 aa11.05□□□□□ -0.64
VPS33B-201ENST00000333371 FGF2P09038 288 aa11.05□□□□□ -0.64
VPS33B-201ENST00000333371 FASLGP48023 281 aa11.05□□□□□ -0.64
VPS33B-201ENST00000333371 SERTAD2Q14140 314 aa11.05□□□□□ -0.64
VPS33B-201ENST00000333371 DEFB133Q30KQ1 61 aa11.05□□□□□ -0.64
VPS33B-201ENST00000333371 ARSKQ6UWY0 536 aa11.05□□□□□ -0.64
VPS33B-201ENST00000333371 ZNF546Q86UE3 836 aa11.05□□□□□ -0.64
VPS33B-201ENST00000333371 GVQW1Q8N7I0 195 aa11.05□□□□□ -0.64
VPS33B-201ENST00000333371 OR4D6Q8NGJ1 314 aa11.05□□□□□ -0.64
VPS33B-201ENST00000333371 OR5M9Q8NGP3 310 aa11.05□□□□□ -0.64
VPS33B-201ENST00000333371 ZNF75AQ96N20 296 aa11.05□□□□□ -0.64
VPS33B-201ENST00000333371 SLC46A1Q96NT5 459 aa11.05□□□□□ -0.64
VPS33B-201ENST00000333371 TBL1XR1Q9BZK7 514 aa11.05□□□□□ -0.64
VPS33B-201ENST00000333371 PRMT8Q9NR22 394 aaPredicted RBP11.05□□□□□ -0.64
VPS33B-201ENST00000333371 ATXN7L1Q9ULK2 861 aaPredicted RBP11.05□□□□□ -0.64
VPS33B-201ENST00000333371 TMED7-TICAM2A0A0A6YYA0 188 aa11.04□□□□□ -0.64
VPS33B-201ENST00000333371 TMEM150CB9EJG8 249 aa11.04□□□□□ -0.64
VPS33B-201ENST00000333371 RIDAP52758 137 aaKnown RBP11.04□□□□□ -0.64
VPS33B-201ENST00000333371 EBPQ15125 230 aaKnown RBP11.04□□□□□ -0.64
VPS33B-201ENST00000333371 OR52W1Q6IF63 320 aa11.04□□□□□ -0.64
VPS33B-201ENST00000333371 MAMDC2Q7Z304 686 aaPredicted RBP11.04□□□□□ -0.64
VPS33B-201ENST00000333371 CATSPERDQ86XM0 798 aa11.04□□□□□ -0.64
VPS33B-201ENST00000333371 OR13C3Q8NGS6 347 aa11.04□□□□□ -0.64
VPS33B-201ENST00000333371 CCNL2Q96S94 520 aaPredicted RBP11.04□□□□□ -0.64
VPS33B-201ENST00000333371 DUSP15Q9H1R2 295 aaPredicted RBP11.04□□□□□ -0.64
VPS33B-201ENST00000333371 C12orf10Q9HB07 376 aa11.04□□□□□ -0.64
VPS33B-201ENST00000333371 TMED7Q9Y3B3 224 aa11.04□□□□□ -0.64
VPS33B-201ENST00000333371 SESN1Q9Y6P5 492 aa11.04□□□□□ -0.64
VPS33B-201ENST00000333371 FRG2CA6NGY1 282 aa11.04□□□□□ -0.64
VPS33B-201ENST00000333371 ATP6V1G2-DDX39BF2Z307 99 aa11.04□□□□□ -0.64
VPS33B-201ENST00000333371 SOX1O00570 391 aaPredicted RBP11.04□□□□□ -0.64
VPS33B-201ENST00000333371 APOC3P02656 99 aa11.04□□□□□ -0.64
VPS33B-201ENST00000333371 ZNF735P0CB33 412 aa11.04□□□□□ -0.64
VPS33B-201ENST00000333371 EIF1AXP47813 144 aaKnown RBP11.04□□□□□ -0.64
VPS33B-201ENST00000333371 TAS2R19P59542 299 aa11.04□□□□□ -0.64
VPS33B-201ENST00000333371 PMPCAQ10713 525 aa11.04□□□□□ -0.64
VPS33B-201ENST00000333371 DHRS2Q13268 280 aa11.04□□□□□ -0.64
VPS33B-201ENST00000333371 SMAD2Q15796 467 aaKnown RBP11.04□□□□□ -0.64
VPS33B-201ENST00000333371 C1orf189Q5VU69 101 aa11.04□□□□□ -0.64
VPS33B-201ENST00000333371 OVCH2Q7RTZ1 564 aa11.04□□□□□ -0.64
VPS33B-201ENST00000333371 RNF144BQ7Z419 303 aa11.04□□□□□ -0.64
VPS33B-201ENST00000333371 PDZD9Q8IXQ8 264 aa11.04□□□□□ -0.64
VPS33B-201ENST00000333371 BEST3Q8N1M1 668 aa11.04□□□□□ -0.64
VPS33B-201ENST00000333371 BPIFB2Q8N4F0 458 aa11.04□□□□□ -0.64
VPS33B-201ENST00000333371 OR13C8Q8NGS7 320 aa11.04□□□□□ -0.64
VPS33B-201ENST00000333371 LHFPL5Q8TAF8 219 aa11.04□□□□□ -0.64
VPS33B-201ENST00000333371 PMEPA1Q969W9 287 aa11.04□□□□□ -0.64
VPS33B-201ENST00000333371 TMEM185BQ9H7F4 350 aa11.04□□□□□ -0.64
VPS33B-201ENST00000333371 IGHV3-20A0A0C4DH32 117 aa11.03□□□□□ -0.64
VPS33B-201ENST00000333371 LOC107986453A0A1B0GWG9 222 aa11.03□□□□□ -0.64
VPS33B-201ENST00000333371 A0A1W2PR77 199 aa11.03□□□□□ -0.64
VPS33B-201ENST00000333371 LILRA5A6NI73 299 aa11.03□□□□□ -0.64
VPS33B-201ENST00000333371 RFPL4AA6NLU0 287 aa11.03□□□□□ -0.64
VPS33B-201ENST00000333371 RFPL4AL1F8VTS6 287 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms