RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 J3QLW9 94 aa14.5□□□□□ -0.09
PDLIM1-201ENST00000329399 GPRIN2O60269 458 aa14.5□□□□□ -0.09
PDLIM1-201ENST00000329399 HLA-DOBP13765 273 aa14.5□□□□□ -0.09
PDLIM1-201ENST00000329399 ZNF19P17023 458 aa14.5□□□□□ -0.09
PDLIM1-201ENST00000329399 CELP19835 753 aa14.5□□□□□ -0.09
PDLIM1-201ENST00000329399 ENPP1P22413 925 aa14.5□□□□□ -0.09
PDLIM1-201ENST00000329399 KIR2DL2P43627 348 aaPredicted RBP14.5□□□□□ -0.09
PDLIM1-201ENST00000329399 BIDP55957 195 aa14.5□□□□□ -0.09
PDLIM1-201ENST00000329399 NCS1P62166 190 aa14.5□□□□□ -0.09
PDLIM1-201ENST00000329399 SIRPAP78324 504 aa14.5□□□□□ -0.09
PDLIM1-201ENST00000329399 SF3B4Q15427 424 aaKnown RBP eCLIP14.5□□□□□ -0.09
PDLIM1-201ENST00000329399 SLC25A35Q3KQZ1 300 aa14.5□□□□□ -0.09
PDLIM1-201ENST00000329399 HBMQ6B0K9 141 aa14.5□□□□□ -0.09
PDLIM1-201ENST00000329399 ZNF544Q6NX49 715 aa14.5□□□□□ -0.09
PDLIM1-201ENST00000329399 VWA1Q6PCB0 445 aa14.5□□□□□ -0.09
PDLIM1-201ENST00000329399 KCTD18Q6PI47 426 aaPredicted RBP14.5□□□□□ -0.09
PDLIM1-201ENST00000329399 MEX3BQ6ZN04 569 aaKnown RBP14.5□□□□□ -0.09
PDLIM1-201ENST00000329399 OR51L1Q8NGJ5 315 aa14.5□□□□□ -0.09
PDLIM1-201ENST00000329399 OTOSQ8NHW6 89 aa14.5□□□□□ -0.09
PDLIM1-201ENST00000329399 ROBO4Q8WZ75 1007 aa14.5□□□□□ -0.09
PDLIM1-201ENST00000329399 STARD4Q96DR4 205 aa14.5□□□□□ -0.09
PDLIM1-201ENST00000329399 C4orf36Q96KX1 117 aa14.5□□□□□ -0.09
PDLIM1-201ENST00000329399 KCTD7Q96MP8 289 aa14.5□□□□□ -0.09
PDLIM1-201ENST00000329399 TBX5Q99593 518 aa14.5□□□□□ -0.09
PDLIM1-201ENST00000329399 TM9SF2Q99805 663 aa14.5□□□□□ -0.09
PDLIM1-201ENST00000329399 RNF122Q9H9V4 155 aa14.5□□□□□ -0.09
PDLIM1-201ENST00000329399 JKAMPQ9P055 326 aa14.5□□□□□ -0.09
PDLIM1-201ENST00000329399 CLEC4AQ9UMR7 237 aa14.5□□□□□ -0.09
PDLIM1-201ENST00000329399 PRR14LQ5THK1 2151 aa14.5□□□□□ -0.09
PDLIM1-201ENST00000329399 CREBBPQ92793 2442 aa14.5□□□□□ -0.09
PDLIM1-201ENST00000329399 METTL15A6NJ78 407 aa14.5□□□□□ -0.09
PDLIM1-201ENST00000329399 GPX5O75715 221 aa14.5□□□□□ -0.09
PDLIM1-201ENST00000329399 IL1AP01583 271 aa14.5□□□□□ -0.09
PDLIM1-201ENST00000329399 KRT8P05787 483 aa14.5□□□□□ -0.09
PDLIM1-201ENST00000329399 ZNF823P16415 610 aa14.5□□□□□ -0.09
PDLIM1-201ENST00000329399 ALOX5APP20292 161 aa14.5□□□□□ -0.09
PDLIM1-201ENST00000329399 NAA10P41227 235 aaPredicted RBP14.5□□□□□ -0.09
PDLIM1-201ENST00000329399 ENTPD1P49961 510 aa14.5□□□□□ -0.09
PDLIM1-201ENST00000329399 CLRN1P58418 232 aa14.5□□□□□ -0.09
PDLIM1-201ENST00000329399 RPS3AP61247 264 aaKnown RBP14.5□□□□□ -0.09
PDLIM1-201ENST00000329399 GUSBP1Q15486 140 aa14.5□□□□□ -0.09
PDLIM1-201ENST00000329399 MOGQ16653 247 aa14.5□□□□□ -0.09
PDLIM1-201ENST00000329399 HIST3H3Q16695 136 aa14.5□□□□□ -0.09
PDLIM1-201ENST00000329399 PCK2Q16822 640 aa14.5□□□□□ -0.09
PDLIM1-201ENST00000329399 ZNF684Q5T5D7 378 aa14.5□□□□□ -0.09
PDLIM1-201ENST00000329399 SLC18B1Q6NT16 456 aa14.5□□□□□ -0.09
PDLIM1-201ENST00000329399 DEGS2Q6QHC5 323 aa14.5□□□□□ -0.09
PDLIM1-201ENST00000329399 RHOUQ7L0Q8 258 aa14.5□□□□□ -0.09
PDLIM1-201ENST00000329399 CHMP1BQ7LBR1 199 aa14.5□□□□□ -0.09
PDLIM1-201ENST00000329399 BTLAQ7Z6A9 289 aa14.5□□□□□ -0.09
PDLIM1-201ENST00000329399 GPAT4Q86UL3 456 aa14.5□□□□□ -0.09
PDLIM1-201ENST00000329399 GLB1L2Q8IW92 636 aa14.5□□□□□ -0.09
PDLIM1-201ENST00000329399 MCEMP1Q8IX19 187 aa14.5□□□□□ -0.09
PDLIM1-201ENST00000329399 ZNF511Q8NB15 262 aa14.5□□□□□ -0.09
PDLIM1-201ENST00000329399 NOXO1Q8NFA2 376 aa14.5□□□□□ -0.09
PDLIM1-201ENST00000329399 THRSPQ92748 146 aa14.5□□□□□ -0.09
PDLIM1-201ENST00000329399 RPL3LQ92901 407 aaKnown RBP14.5□□□□□ -0.09
PDLIM1-201ENST00000329399 TSSK2Q96PF2 358 aa14.5□□□□□ -0.09
PDLIM1-201ENST00000329399 SPOCK3Q9BQ16 436 aa14.5□□□□□ -0.09
PDLIM1-201ENST00000329399 ISG20L2Q9H9L3 353 aaKnown RBP14.5□□□□□ -0.09
PDLIM1-201ENST00000329399 EXOSC4Q9NPD3 245 aaKnown RBP14.5□□□□□ -0.09
PDLIM1-201ENST00000329399 RCE1Q9Y256 329 aa14.5□□□□□ -0.09
PDLIM1-201ENST00000329399 DCTN6O00399 190 aa14.49□□□□□ -0.09
PDLIM1-201ENST00000329399 DVL2O14641 736 aa14.49□□□□□ -0.09
PDLIM1-201ENST00000329399 SELENOFO60613 162 aa14.49□□□□□ -0.09
PDLIM1-201ENST00000329399 ZNF254O75437 659 aa14.49□□□□□ -0.09
PDLIM1-201ENST00000329399 HLA-DQA2P01906 255 aa14.49□□□□□ -0.09
PDLIM1-201ENST00000329399 PGA4P0DJD7 388 aa14.49□□□□□ -0.09
PDLIM1-201ENST00000329399 PGA3P0DJD8 388 aa14.49□□□□□ -0.09
PDLIM1-201ENST00000329399 COX6B1P14854 86 aa14.49□□□□□ -0.09
PDLIM1-201ENST00000329399 CTLA4P16410 223 aa14.49□□□□□ -0.09
PDLIM1-201ENST00000329399 NR4A1P22736 598 aa14.49□□□□□ -0.09
PDLIM1-201ENST00000329399 ZNF133P52736 654 aaPredicted RBP14.49□□□□□ -0.09
PDLIM1-201ENST00000329399 LSM3P62310 102 aaKnown RBP14.49□□□□□ -0.09
PDLIM1-201ENST00000329399 ROR2Q01974 943 aaKnown RBP14.49□□□□□ -0.09
PDLIM1-201ENST00000329399 MELKQ14680 651 aa14.49□□□□□ -0.09
PDLIM1-201ENST00000329399 SLC17A1Q14916 467 aa14.49□□□□□ -0.09
PDLIM1-201ENST00000329399 DMKNQ6E0U4 476 aaPredicted RBP14.49□□□□□ -0.09
PDLIM1-201ENST00000329399 CREB3L2Q70SY1 520 aa14.49□□□□□ -0.09
PDLIM1-201ENST00000329399 P4HA3Q7Z4N8 544 aa14.49□□□□□ -0.09
PDLIM1-201ENST00000329399 LUZP2Q86TE4 346 aa14.49□□□□□ -0.09
PDLIM1-201ENST00000329399 DMRTC2Q8IXT2 367 aaPredicted RBP14.49□□□□□ -0.09
PDLIM1-201ENST00000329399 KDM8Q8N371 416 aa14.49□□□□□ -0.09
PDLIM1-201ENST00000329399 OR6N2Q8NGY6 317 aa14.49□□□□□ -0.09
PDLIM1-201ENST00000329399 NDNFQ8TB73 568 aa14.49□□□□□ -0.09
PDLIM1-201ENST00000329399 ZNRF4Q8WWF5 429 aa14.49□□□□□ -0.09
PDLIM1-201ENST00000329399 S100ZQ8WXG8 99 aa14.49□□□□□ -0.09
PDLIM1-201ENST00000329399 TXNL4BQ9NX01 149 aaKnown RBP14.49□□□□□ -0.09
PDLIM1-201ENST00000329399 FREM1Q5H8C1 2179 aa14.49□□□□□ -0.09
PDLIM1-201ENST00000329399 CCDC168Q8NDH2 2452 aa14.49□□□□□ -0.09
PDLIM1-201ENST00000329399 IGHV3-15A0A0B4J1V0 119 aa14.48□□□□□ -0.09
PDLIM1-201ENST00000329399 SLC35F4A4IF30 521 aa14.48□□□□□ -0.09
PDLIM1-201ENST00000329399 EEF1E1-BLOC1S5C9J1V9 151 aa14.48□□□□□ -0.09
PDLIM1-201ENST00000329399 H7C1C5 153 aa14.48□□□□□ -0.09
PDLIM1-201ENST00000329399 ZNF593O00488 134 aaPredicted RBP14.48□□□□□ -0.09
PDLIM1-201ENST00000329399 EEF1E1O43324 174 aaKnown RBP14.48□□□□□ -0.09
PDLIM1-201ENST00000329399 RGS9O75916 674 aaPredicted RBP14.48□□□□□ -0.09
PDLIM1-201ENST00000329399 IL18BPO95998 194 aa14.48□□□□□ -0.09
PDLIM1-201ENST00000329399 CGAP01215 116 aa14.48□□□□□ -0.09
PDLIM1-201ENST00000329399 PAX7P23759 505 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms