RNA–Protein interactions for RNA: ENST00000325307.11

HMGB3-201, Transcript of high mobility group box 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGB3, Length 3,560 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-201ENST00000325307 RBM24Q9BX46 236 aaKnown RBP8.88□□□□□ -0.99
HMGB3-201ENST00000325307 RACGAP1Q9H0H5 632 aa8.88□□□□□ -0.99
HMGB3-201ENST00000325307 WDR76Q9H967 626 aa8.88□□□□□ -0.99
HMGB3-201ENST00000325307 POLR1DQ9Y2S0 133 aa8.88□□□□□ -0.99
HMGB3-201ENST00000325307 RP1L1Q8IWN7 2480 aaPredicted RBP8.88□□□□□ -0.99
HMGB3-201ENST00000325307 LOC100506127A0A0U1RQW1 187 aa8.88□□□□□ -0.99
HMGB3-201ENST00000325307 MPZL1O95297 269 aa8.88□□□□□ -0.99
HMGB3-201ENST00000325307 YES1P07947 543 aa8.88□□□□□ -0.99
HMGB3-201ENST00000325307 SPARCP09486 303 aa8.88□□□□□ -0.99
HMGB3-201ENST00000325307 SELLP14151 372 aa8.88□□□□□ -0.99
HMGB3-201ENST00000325307 ZNF823P16415 610 aa8.88□□□□□ -0.99
HMGB3-201ENST00000325307 RPS27P42677 84 aaKnown RBP8.88□□□□□ -0.99
HMGB3-201ENST00000325307 GGTLC2Q14390 218 aa8.88□□□□□ -0.99
HMGB3-201ENST00000325307 GLB1L2Q8IW92 636 aa8.88□□□□□ -0.99
HMGB3-201ENST00000325307 ZNF100Q8IYN0 542 aa8.88□□□□□ -0.99
HMGB3-201ENST00000325307 GCNT2Q8N0V5 402 aa8.88□□□□□ -0.99
HMGB3-201ENST00000325307 TMEM123Q8N131 208 aa8.88□□□□□ -0.99
HMGB3-201ENST00000325307 OR10H5Q8NGA6 315 aa8.88□□□□□ -0.99
HMGB3-201ENST00000325307 B3GAT2Q9NPZ5 323 aa8.88□□□□□ -0.99
HMGB3-201ENST00000325307 ASF1BQ9NVP2 202 aa8.88□□□□□ -0.99
HMGB3-201ENST00000325307 PARPBPQ9NWS1 579 aa8.88□□□□□ -0.99
HMGB3-201ENST00000325307 ING1Q9UK53 422 aaPredicted RBP8.88□□□□□ -0.99
HMGB3-201ENST00000325307 KIAA1549Q9HCM3 1950 aa8.87□□□□□ -0.99
HMGB3-201ENST00000325307 IGKV3D-15A0A087WSY6 115 aa8.87□□□□□ -0.99
HMGB3-201ENST00000325307 A0A1W2PQL4 384 aaPredicted RBP8.87□□□□□ -0.99
HMGB3-201ENST00000325307 CCRL2O00421 344 aa8.87□□□□□ -0.99
HMGB3-201ENST00000325307 CRYBB2P43320 205 aa8.87□□□□□ -0.99
HMGB3-201ENST00000325307 ACTC1P68032 377 aa8.87□□□□□ -0.99
HMGB3-201ENST00000325307 ACTA1P68133 377 aa8.87□□□□□ -0.99
HMGB3-201ENST00000325307 OR2G6Q5TZ20 316 aa8.87□□□□□ -0.99
HMGB3-201ENST00000325307 GFRALQ6UXV0 394 aa8.87□□□□□ -0.99
HMGB3-201ENST00000325307 RPTNQ6XPR3 784 aa8.87□□□□□ -0.99
HMGB3-201ENST00000325307 CD163Q86VB7 1156 aa8.87□□□□□ -0.99
HMGB3-201ENST00000325307 UBE2J2Q8N2K1 259 aa8.87□□□□□ -0.99
HMGB3-201ENST00000325307 ALKBH3Q96Q83 286 aaPredicted RBP8.87□□□□□ -0.99
HMGB3-201ENST00000325307 USB1Q9BQ65 265 aaKnown RBP8.87□□□□□ -0.99
HMGB3-201ENST00000325307 C12orf49Q9H741 205 aa8.87□□□□□ -0.99
HMGB3-201ENST00000325307 MARCH7Q9H992 704 aa8.87□□□□□ -0.99
HMGB3-201ENST00000325307 ERVK13-1Q9NX77 482 aa8.87□□□□□ -0.99
HMGB3-201ENST00000325307 PPP1R14DQ9NXH3 145 aa8.87□□□□□ -0.99
HMGB3-201ENST00000325307 LAMP5Q9UJQ1 280 aa8.87□□□□□ -0.99
HMGB3-201ENST00000325307 OR6C65A6NJZ3 312 aa8.87□□□□□ -0.99
HMGB3-201ENST00000325307 AHRRA9YTQ3 701 aa8.87□□□□□ -0.99
HMGB3-201ENST00000325307 ZNF593O00488 134 aaPredicted RBP8.87□□□□□ -0.99
HMGB3-201ENST00000325307 ZNF432O94892 652 aa8.87□□□□□ -0.99
HMGB3-201ENST00000325307 TFP02787 698 aa8.87□□□□□ -0.99
HMGB3-201ENST00000325307 CDAP32320 146 aa8.87□□□□□ -0.99
HMGB3-201ENST00000325307 NTF4P34130 210 aa8.87□□□□□ -0.99
HMGB3-201ENST00000325307 PPP5CP53041 499 aa8.87□□□□□ -0.99
HMGB3-201ENST00000325307 PER3P56645 1201 aa8.87□□□□□ -0.99
HMGB3-201ENST00000325307 SPHARQ15513 63 aa8.87□□□□□ -0.99
HMGB3-201ENST00000325307 LRFN4Q6PJG9 635 aa8.87□□□□□ -0.99
HMGB3-201ENST00000325307 C3P1Q6ZMU1 363 aa8.87□□□□□ -0.99
HMGB3-201ENST00000325307 SLC16A9Q7RTY1 509 aa8.87□□□□□ -0.99
HMGB3-201ENST00000325307 DPY19L4Q7Z388 723 aa8.87□□□□□ -0.99
HMGB3-201ENST00000325307 LYSMD2Q8IV50 215 aa8.87□□□□□ -0.99
HMGB3-201ENST00000325307 KLHL36Q8N4N3 616 aa8.87□□□□□ -0.99
HMGB3-201ENST00000325307 SNX33Q8WV41 574 aa8.87□□□□□ -0.99
HMGB3-201ENST00000325307 HTRA1Q92743 480 aa8.87□□□□□ -0.99
HMGB3-201ENST00000325307 ALG8Q9BVK2 526 aa8.87□□□□□ -0.99
HMGB3-201ENST00000325307 NDUFB11Q9NX14 153 aa8.87□□□□□ -0.99
HMGB3-201ENST00000325307 FIGNL2A6NMB9 653 aa8.87□□□□□ -0.99
HMGB3-201ENST00000325307 UPK3AO75631 287 aa8.87□□□□□ -0.99
HMGB3-201ENST00000325307 UPK1BO75841 260 aa8.87□□□□□ -0.99
HMGB3-201ENST00000325307 IGHA1P01876 353 aa8.87□□□□□ -0.99
HMGB3-201ENST00000325307 OR2T7P0C7T2 308 aa8.87□□□□□ -0.99
HMGB3-201ENST00000325307 LIMS3P0CW19 117 aa8.87□□□□□ -0.99
HMGB3-201ENST00000325307 LIMS4P0CW20 117 aa8.87□□□□□ -0.99
HMGB3-201ENST00000325307 NR4A2P43354 598 aa8.87□□□□□ -0.99
HMGB3-201ENST00000325307 SIRPAP78324 504 aa8.87□□□□□ -0.99
HMGB3-201ENST00000325307 HSF2Q03933 536 aa8.87□□□□□ -0.99
HMGB3-201ENST00000325307 SGCAQ16586 387 aa8.87□□□□□ -0.99
HMGB3-201ENST00000325307 ZNF181Q2M3W8 571 aa8.87□□□□□ -0.99
HMGB3-201ENST00000325307 ACSF3Q4G176 576 aaPredicted RBP8.87□□□□□ -0.99
HMGB3-201ENST00000325307 PHYHD1Q5SRE7 291 aa8.87□□□□□ -0.99
HMGB3-201ENST00000325307 TMPRSS11AQ6ZMR5 421 aa8.87□□□□□ -0.99
HMGB3-201ENST00000325307 FGD2Q7Z6J4 655 aa8.87□□□□□ -0.99
HMGB3-201ENST00000325307 C20orf196Q8IYI0 205 aa8.87□□□□□ -0.99
HMGB3-201ENST00000325307 ZNF565Q8N9K5 539 aa8.87□□□□□ -0.99
HMGB3-201ENST00000325307 OR2T27Q8NH04 317 aa8.87□□□□□ -0.99
HMGB3-201ENST00000325307 THEM6Q8WUY1 208 aa8.87□□□□□ -0.99
HMGB3-201ENST00000325307 GATAD2BQ8WXI9 593 aa8.87□□□□□ -0.99
HMGB3-201ENST00000325307 APH1AQ96BI3 265 aa8.87□□□□□ -0.99
HMGB3-201ENST00000325307 CEP19Q96LK0 163 aa8.87□□□□□ -0.99
HMGB3-201ENST00000325307 BCO1Q9HAY6 547 aa8.87□□□□□ -0.99
HMGB3-201ENST00000325307 CLCF1Q9UBD9 225 aa8.87□□□□□ -0.99
HMGB3-201ENST00000325307 ATRXP46100 2492 aa8.86□□□□□ -0.99
HMGB3-201ENST00000325307 PKD1L2Q7Z442 2459 aa8.86□□□□□ -0.99
HMGB3-201ENST00000325307 ZNF724A8MTY0 619 aa8.86□□□□□ -0.99
HMGB3-201ENST00000325307 ZNF670-ZNF695F2Z2N8 137 aa8.86□□□□□ -0.99
HMGB3-201ENST00000325307 PTTG1O95997 202 aa8.86□□□□□ -0.99
HMGB3-201ENST00000325307 LAP3P28838 519 aa8.86□□□□□ -0.99
HMGB3-201ENST00000325307 ZNF84P51523 738 aa8.86□□□□□ -0.99
HMGB3-201ENST00000325307 ZNF324BQ6AW86 544 aaPredicted RBP8.86□□□□□ -0.99
HMGB3-201ENST00000325307 TIGD4Q8IY51 512 aa8.86□□□□□ -0.99
HMGB3-201ENST00000325307 CNEP1R1Q8N9A8 125 aa8.86□□□□□ -0.99
HMGB3-201ENST00000325307 TMEM54Q969K7 222 aa8.86□□□□□ -0.99
HMGB3-201ENST00000325307 TMEM45BQ96B21 275 aa8.86□□□□□ -0.99
HMGB3-201ENST00000325307 BARHL1Q9BZE3 327 aa8.86□□□□□ -0.99
HMGB3-201ENST00000325307 SLCO5A1Q9H2Y9 848 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms