RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 TRAF3IP2O43734 574 aaPredicted RBP5.69□□□□□ -1.5
CSTF3-201ENST00000323959 OR10H3O60404 316 aa5.69□□□□□ -1.5
CSTF3-201ENST00000323959 UTS2O95399 124 aa5.69□□□□□ -1.5
CSTF3-201ENST00000323959 CD1AP06126 327 aa5.69□□□□□ -1.5
CSTF3-201ENST00000323959 ELK4P28324 431 aa5.69□□□□□ -1.5
CSTF3-201ENST00000323959 BDH1Q02338 343 aa5.69□□□□□ -1.5
CSTF3-201ENST00000323959 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.69□□□□□ -1.5
CSTF3-201ENST00000323959 RAB40BQ12829 278 aa5.69□□□□□ -1.5
CSTF3-201ENST00000323959 GANABQ14697 944 aaKnown RBP5.69□□□□□ -1.5
CSTF3-201ENST00000323959 MST1LQ2TV78 715 aa5.69□□□□□ -1.5
CSTF3-201ENST00000323959 ZIK1Q3SY52 487 aaPredicted RBP5.69□□□□□ -1.5
CSTF3-201ENST00000323959 PDZK1Q5T2W1 519 aa5.69□□□□□ -1.5
CSTF3-201ENST00000323959 GID4Q8IVV7 300 aa5.69□□□□□ -1.5
CSTF3-201ENST00000323959 CCDC103Q8IW40 242 aa5.69□□□□□ -1.5
CSTF3-201ENST00000323959 GABRG1Q8N1C3 465 aa5.69□□□□□ -1.5
CSTF3-201ENST00000323959 LINC01006Q8NI28 216 aa5.69□□□□□ -1.5
CSTF3-201ENST00000323959 ST8SIA1Q92185 356 aa5.69□□□□□ -1.5
CSTF3-201ENST00000323959 EFHD2Q96C19 240 aaPredicted RBP5.69□□□□□ -1.5
CSTF3-201ENST00000323959 MUCL1Q96DR8 90 aa5.69□□□□□ -1.5
CSTF3-201ENST00000323959 TBC1D23Q9NUY8 699 aa5.69□□□□□ -1.5
CSTF3-201ENST00000323959 ZNF69Q9UC07 566 aa5.69□□□□□ -1.5
CSTF3-201ENST00000323959 RSL24D1Q9UHA3 163 aaKnown RBP5.69□□□□□ -1.5
CSTF3-201ENST00000323959 DIMT1Q9UNQ2 313 aaKnown RBP5.69□□□□□ -1.5
CSTF3-201ENST00000323959 LSM2Q9Y333 95 aaKnown RBP5.69□□□□□ -1.5
CSTF3-201ENST00000323959 A3GALT2U3KPV4 340 aa5.69□□□□□ -1.5
CSTF3-201ENST00000323959 DNAH10Q8IVF4 4471 aa5.69□□□□□ -1.5
CSTF3-201ENST00000323959 FAM181BA6NEQ2 426 aa5.68□□□□□ -1.5
CSTF3-201ENST00000323959 UNC119BA6NIH7 251 aa5.68□□□□□ -1.5
CSTF3-201ENST00000323959 ZNF99A8MXY4 864 aaPredicted RBP5.68□□□□□ -1.5
CSTF3-201ENST00000323959 HRKO00198 91 aa5.68□□□□□ -1.5
CSTF3-201ENST00000323959 SCDO00767 359 aa5.68□□□□□ -1.5
CSTF3-201ENST00000323959 SURF4O15260 269 aa5.68□□□□□ -1.5
CSTF3-201ENST00000323959 PRODHO43272 600 aa5.68□□□□□ -1.5
CSTF3-201ENST00000323959 ZNF264O43296 627 aa5.68□□□□□ -1.5
CSTF3-201ENST00000323959 GABARAPO95166 117 aa5.68□□□□□ -1.5
CSTF3-201ENST00000323959 IGHA1P01876 353 aa5.68□□□□□ -1.5
CSTF3-201ENST00000323959 BCAP31P51572 246 aa5.68□□□□□ -1.5
CSTF3-201ENST00000323959 IL5RAQ01344 420 aa5.68□□□□□ -1.5
CSTF3-201ENST00000323959 ID2Q02363 134 aa5.68□□□□□ -1.5
CSTF3-201ENST00000323959 RAB39AQ14964 217 aa5.68□□□□□ -1.5
CSTF3-201ENST00000323959 GLYR1Q49A26 553 aaPredicted RBP5.68□□□□□ -1.5
CSTF3-201ENST00000323959 ARMCX4Q5H9R4 360 aa5.68□□□□□ -1.5
CSTF3-201ENST00000323959 AADACL4Q5VUY2 407 aa5.68□□□□□ -1.5
CSTF3-201ENST00000323959 NXNL2Q5VZ03 156 aa5.68□□□□□ -1.5
CSTF3-201ENST00000323959 GDPGP1Q6ZNW5 385 aa5.68□□□□□ -1.5
CSTF3-201ENST00000323959 KCTD8Q6ZWB6 473 aa5.68□□□□□ -1.5
CSTF3-201ENST00000323959 BHLHA15Q7RTS1 189 aaPredicted RBP5.68□□□□□ -1.5
CSTF3-201ENST00000323959 RNF144BQ7Z419 303 aa5.68□□□□□ -1.5
CSTF3-201ENST00000323959 ZAR1Q86SH2 424 aa5.68□□□□□ -1.5
CSTF3-201ENST00000323959 OR1J4Q8NGS1 313 aa5.68□□□□□ -1.5
CSTF3-201ENST00000323959 OR14L1PQ8NHC6 308 aa5.68□□□□□ -1.5
CSTF3-201ENST00000323959 GGHQ92820 318 aa5.68□□□□□ -1.5
CSTF3-201ENST00000323959 RFKQ969G6 155 aa5.68□□□□□ -1.5
CSTF3-201ENST00000323959 NXF5Q9H1B4 397 aaKnown RBP5.68□□□□□ -1.5
CSTF3-201ENST00000323959 ANKRA2Q9H9E1 313 aa5.68□□□□□ -1.5
CSTF3-201ENST00000323959 ACOT13Q9NPJ3 140 aa5.68□□□□□ -1.5
CSTF3-201ENST00000323959 FBXO34Q9NWN3 711 aa5.68□□□□□ -1.5
CSTF3-201ENST00000323959 SLC7A7Q9UM01 511 aa5.68□□□□□ -1.5
CSTF3-201ENST00000323959 SIGLEC7Q9Y286 467 aa5.68□□□□□ -1.5
CSTF3-201ENST00000323959 MED31Q9Y3C7 131 aa5.68□□□□□ -1.5
CSTF3-201ENST00000323959 PPIAL4EA0A075B759 164 aa5.68□□□□□ -1.5
CSTF3-201ENST00000323959 PPIAL4CA0A0B4J2A2 164 aa5.68□□□□□ -1.5
CSTF3-201ENST00000323959 CENPVL1A0A0U1RR11 272 aa5.68□□□□□ -1.5
CSTF3-201ENST00000323959 A0A1B0GWA3 101 aa5.68□□□□□ -1.5
CSTF3-201ENST00000323959 TMEM129A0AVI4 362 aa5.68□□□□□ -1.5
CSTF3-201ENST00000323959 FUOMA2VDF0 154 aa5.68□□□□□ -1.5
CSTF3-201ENST00000323959 B9A039 149 aa5.68□□□□□ -1.5
CSTF3-201ENST00000323959 PPIAL4DF5H284 164 aa5.68□□□□□ -1.5
CSTF3-201ENST00000323959 ZNF208O43345 1280 aa5.68□□□□□ -1.5
CSTF3-201ENST00000323959 NPIPB7O75200 414 aa5.68□□□□□ -1.5
CSTF3-201ENST00000323959 MT-ATP6P00846 226 aa5.68□□□□□ -1.5
CSTF3-201ENST00000323959 PPIAL4FP0DN26 164 aa5.68□□□□□ -1.5
CSTF3-201ENST00000323959 EPHA2P29317 976 aa5.68□□□□□ -1.5
CSTF3-201ENST00000323959 POLR2IP36954 125 aaKnown RBP5.68□□□□□ -1.5
CSTF3-201ENST00000323959 SLC1A3P43003 542 aa5.68□□□□□ -1.5
CSTF3-201ENST00000323959 CENPAP49450 140 aa5.68□□□□□ -1.5
CSTF3-201ENST00000323959 CLK1P49759 484 aaKnown RBP5.68□□□□□ -1.5
CSTF3-201ENST00000323959 P2RX1P51575 399 aa5.68□□□□□ -1.5
CSTF3-201ENST00000323959 NRG3P56975 720 aa5.68□□□□□ -1.5
CSTF3-201ENST00000323959 RELBQ01201 579 aa5.68□□□□□ -1.5
CSTF3-201ENST00000323959 EMX1Q04741 257 aaPredicted RBP5.68□□□□□ -1.5
CSTF3-201ENST00000323959 GPR68Q15743 365 aa5.68□□□□□ -1.5
CSTF3-201ENST00000323959 EFNB3Q15768 340 aa5.68□□□□□ -1.5
CSTF3-201ENST00000323959 FGD3Q5JSP0 725 aa5.68□□□□□ -1.5
CSTF3-201ENST00000323959 TIMM23BQ5SRD1 257 aa5.68□□□□□ -1.5
CSTF3-201ENST00000323959 ZNF730Q6ZMV8 503 aa5.68□□□□□ -1.5
CSTF3-201ENST00000323959 SZRD1Q7Z422 152 aa5.68□□□□□ -1.5
CSTF3-201ENST00000323959 CDK20Q8IZL9 346 aa5.68□□□□□ -1.5
CSTF3-201ENST00000323959 OR5W2Q8NH69 310 aa5.68□□□□□ -1.5
CSTF3-201ENST00000323959 VANGL1Q8TAA9 524 aaPredicted RBP5.68□□□□□ -1.5
CSTF3-201ENST00000323959 TEX47Q8TBZ9 253 aa5.68□□□□□ -1.5
CSTF3-201ENST00000323959 HAVCR2Q8TDQ0 301 aa5.68□□□□□ -1.5
CSTF3-201ENST00000323959 CNOT9Q92600 299 aaKnown RBP5.68□□□□□ -1.5
CSTF3-201ENST00000323959 SLC38A2Q96QD8 506 aa5.68□□□□□ -1.5
CSTF3-201ENST00000323959 NDEL1Q9GZM8 345 aa5.68□□□□□ -1.5
CSTF3-201ENST00000323959 LPAR2Q9HBW0 351 aa5.68□□□□□ -1.5
CSTF3-201ENST00000323959 ENPP5Q9UJA9 477 aa5.68□□□□□ -1.5
CSTF3-201ENST00000323959 ZNF229Q9UJW7 825 aa5.68□□□□□ -1.5
CSTF3-201ENST00000323959 HIF3AQ9Y2N7 669 aa5.68□□□□□ -1.5
CSTF3-201ENST00000323959 SNX5Q9Y5X3 404 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms