RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 ELF4Q99607 663 aaPredicted RBP16.12■□□□□ 0.17
PRKCB-202ENST00000321728 TMEM100Q9NV29 134 aa16.12■□□□□ 0.17
PRKCB-202ENST00000321728 TRANK1O15050 2925 aa16.11■□□□□ 0.17
PRKCB-202ENST00000321728 TRAV20A0A0B4J274 112 aa16.11■□□□□ 0.17
PRKCB-202ENST00000321728 A0A1W2PPC1 479 aa16.11■□□□□ 0.17
PRKCB-202ENST00000321728 EIF1AYO14602 144 aaKnown RBP16.11■□□□□ 0.17
PRKCB-202ENST00000321728 RDH16O75452 317 aa16.11■□□□□ 0.17
PRKCB-202ENST00000321728 PNPP00491 289 aa16.11■□□□□ 0.17
PRKCB-202ENST00000321728 CD2P06729 351 aa16.11■□□□□ 0.17
PRKCB-202ENST00000321728 ERCC1P07992 297 aaPredicted RBP16.11■□□□□ 0.17
PRKCB-202ENST00000321728 IGFALSP35858 605 aa16.11■□□□□ 0.17
PRKCB-202ENST00000321728 EIF1AXP47813 144 aaKnown RBP16.11■□□□□ 0.17
PRKCB-202ENST00000321728 RAB5BP61020 215 aa16.11■□□□□ 0.17
PRKCB-202ENST00000321728 PEA15Q15121 130 aa16.11■□□□□ 0.17
PRKCB-202ENST00000321728 SMAD2Q15796 467 aaKnown RBP16.11■□□□□ 0.17
PRKCB-202ENST00000321728 ALG11Q2TAA5 492 aa16.11■□□□□ 0.17
PRKCB-202ENST00000321728 GFOD2Q3B7J2 385 aa16.11■□□□□ 0.17
PRKCB-202ENST00000321728 NPSR1Q6W5P4 371 aa16.11■□□□□ 0.17
PRKCB-202ENST00000321728 ADGRE4PQ86SQ3 457 aa16.11■□□□□ 0.17
PRKCB-202ENST00000321728 SLC30A7Q8NEW0 376 aa16.11■□□□□ 0.17
PRKCB-202ENST00000321728 OTOSQ8NHW6 89 aa16.11■□□□□ 0.17
PRKCB-202ENST00000321728 FLVCR1-AS1Q8TAF5 88 aa16.11■□□□□ 0.17
PRKCB-202ENST00000321728 FAM3CQ92520 227 aa16.11■□□□□ 0.17
PRKCB-202ENST00000321728 ZNF587Q96SQ5 575 aaPredicted RBP16.11■□□□□ 0.17
PRKCB-202ENST00000321728 APOOQ9BUR5 198 aa16.11■□□□□ 0.17
PRKCB-202ENST00000321728 Q9N2J8 555 aa16.11■□□□□ 0.17
PRKCB-202ENST00000321728 MMP25Q9NPA2 562 aa16.11■□□□□ 0.17
PRKCB-202ENST00000321728 MUC22E2RYF6 1773 aaPredicted RBP16.11■□□□□ 0.17
PRKCB-202ENST00000321728 A0A1W2PQU0 124 aa16.11■□□□□ 0.17
PRKCB-202ENST00000321728 NUDT19A8MXV4 375 aa16.11■□□□□ 0.17
PRKCB-202ENST00000321728 F8VVB4 439 aa16.11■□□□□ 0.17
PRKCB-202ENST00000321728 F8VWA3 439 aa16.11■□□□□ 0.17
PRKCB-202ENST00000321728 NPIPB9F8W1W9 429 aa16.11■□□□□ 0.17
PRKCB-202ENST00000321728 MYOGP15173 224 aa16.11■□□□□ 0.17
PRKCB-202ENST00000321728 S1PR1P21453 382 aa16.11■□□□□ 0.17
PRKCB-202ENST00000321728 EIF2B1Q14232 305 aaKnown RBP16.11■□□□□ 0.17
PRKCB-202ENST00000321728 SLC17A1Q14916 467 aa16.11■□□□□ 0.17
PRKCB-202ENST00000321728 KIR2DS3Q14952 304 aa16.11■□□□□ 0.17
PRKCB-202ENST00000321728 OR52W1Q6IF63 320 aa16.11■□□□□ 0.17
PRKCB-202ENST00000321728 ADAD2Q8NCV1 583 aaKnown RBP16.11■□□□□ 0.17
PRKCB-202ENST00000321728 G6PC3Q9BUM1 346 aa16.11■□□□□ 0.17
PRKCB-202ENST00000321728 DHCR7Q9UBM7 475 aaKnown RBP16.11■□□□□ 0.17
PRKCB-202ENST00000321728 PRUNE2Q8WUY3 3088 aa16.1■□□□□ 0.17
PRKCB-202ENST00000321728 TEX13DA0A0J9YY54 714 aaPredicted RBP16.1■□□□□ 0.17
PRKCB-202ENST00000321728 PHYHO14832 338 aa16.1■□□□□ 0.17
PRKCB-202ENST00000321728 STK17BO94768 372 aa16.1■□□□□ 0.17
PRKCB-202ENST00000321728 CRHP06850 196 aa16.1■□□□□ 0.17
PRKCB-202ENST00000321728 SERPINF1P36955 418 aa16.1■□□□□ 0.17
PRKCB-202ENST00000321728 PPICP45877 212 aa16.1■□□□□ 0.17
PRKCB-202ENST00000321728 SPOCK1Q08629 439 aa16.1■□□□□ 0.17
PRKCB-202ENST00000321728 PJVKQ0ZLH3 352 aa16.1■□□□□ 0.17
PRKCB-202ENST00000321728 RBM39Q14498 530 aaKnown RBP16.1■□□□□ 0.17
PRKCB-202ENST00000321728 KLHL26Q53HC5 615 aa16.1■□□□□ 0.17
PRKCB-202ENST00000321728 EEF1A1P5Q5VTE0 462 aa16.1■□□□□ 0.17
PRKCB-202ENST00000321728 FAM109BQ6ICB4 259 aaPredicted RBP16.1■□□□□ 0.17
PRKCB-202ENST00000321728 SKA3Q8IX90 412 aa16.1■□□□□ 0.17
PRKCB-202ENST00000321728 GVQW1Q8N7I0 195 aa16.1■□□□□ 0.17
PRKCB-202ENST00000321728 OR51A2Q8NGJ7 313 aa16.1■□□□□ 0.17
PRKCB-202ENST00000321728 CCL4L1Q8NHW4 92 aa16.1■□□□□ 0.17
PRKCB-202ENST00000321728 HOXB13Q92826 284 aaPredicted RBP16.1■□□□□ 0.17
PRKCB-202ENST00000321728 SLC25A44Q96H78 314 aaPredicted RBP16.1■□□□□ 0.17
PRKCB-202ENST00000321728 VSTM2LQ96N03 204 aa16.1■□□□□ 0.17
PRKCB-202ENST00000321728 OR2M4Q96R27 311 aa16.1■□□□□ 0.17
PRKCB-202ENST00000321728 DOK2O60496 412 aa16.1■□□□□ 0.17
PRKCB-202ENST00000321728 HEXAP06865 529 aa16.1■□□□□ 0.17
PRKCB-202ENST00000321728 TRAPPC6BQ86SZ2 158 aa16.1■□□□□ 0.17
PRKCB-202ENST00000321728 FJX1Q86VR8 437 aa16.1■□□□□ 0.17
PRKCB-202ENST00000321728 PARGQ86W56 976 aa16.1■□□□□ 0.17
PRKCB-202ENST00000321728 OR14C36Q8NHC7 312 aa16.1■□□□□ 0.17
PRKCB-202ENST00000321728 OR8B4Q96RC9 309 aa16.1■□□□□ 0.17
PRKCB-202ENST00000321728 SLC17A9Q9BYT1 436 aa16.1■□□□□ 0.17
PRKCB-202ENST00000321728 PRKNO60260 465 aaPredicted RBP16.09■□□□□ 0.17
PRKCB-202ENST00000321728 IL2RAP01589 272 aa16.09■□□□□ 0.17
PRKCB-202ENST00000321728 RPS21P63220 83 aaKnown RBP16.09■□□□□ 0.17
PRKCB-202ENST00000321728 SLC22A6Q4U2R8 563 aa16.09■□□□□ 0.17
PRKCB-202ENST00000321728 RBMS3Q6XE24 437 aaKnown RBP16.09■□□□□ 0.17
PRKCB-202ENST00000321728 TMEM184AQ6ZMB5 413 aa16.09■□□□□ 0.17
PRKCB-202ENST00000321728 CHST4Q8NCG5 386 aa16.09■□□□□ 0.17
PRKCB-202ENST00000321728 ASB5Q8WWX0 329 aa16.09■□□□□ 0.17
PRKCB-202ENST00000321728 NRIP2Q9BQI9 281 aa16.09■□□□□ 0.17
PRKCB-202ENST00000321728 RHOFQ9HBH0 211 aa16.09■□□□□ 0.17
PRKCB-202ENST00000321728 OR2S2Q9NQN1 319 aa16.09■□□□□ 0.17
PRKCB-202ENST00000321728 THAP10Q9P2Z0 257 aaPredicted RBP16.09■□□□□ 0.17
PRKCB-202ENST00000321728 PRSS38A1L453 326 aa16.09■□□□□ 0.17
PRKCB-202ENST00000321728 TNFSF14O43557 240 aa16.09■□□□□ 0.17
PRKCB-202ENST00000321728 SPARCP09486 303 aa16.09■□□□□ 0.17
PRKCB-202ENST00000321728 PNMTP11086 282 aa16.09■□□□□ 0.17
PRKCB-202ENST00000321728 SQSTM1Q13501 440 aa16.09■□□□□ 0.17
PRKCB-202ENST00000321728 SMCO1Q147U7 214 aa16.09■□□□□ 0.17
PRKCB-202ENST00000321728 WBP2NLQ6ICG8 309 aa16.09■□□□□ 0.17
PRKCB-202ENST00000321728 IL34Q6ZMJ4 242 aa16.09■□□□□ 0.17
PRKCB-202ENST00000321728 TMPPEQ6ZT21 453 aa16.09■□□□□ 0.17
PRKCB-202ENST00000321728 ZNF761Q86XN6 746 aaPredicted RBP16.09■□□□□ 0.17
PRKCB-202ENST00000321728 MRGPRFQ96AM1 343 aa16.09■□□□□ 0.17
PRKCB-202ENST00000321728 RRNAD1Q96FB5 475 aaKnown RBP16.09■□□□□ 0.17
PRKCB-202ENST00000321728 RCC2Q9P258 522 aaKnown RBP16.09■□□□□ 0.17
PRKCB-202ENST00000321728 TXNDC12O95881 172 aa16.08■□□□□ 0.16
PRKCB-202ENST00000321728 S100A6P06703 90 aa16.08■□□□□ 0.16
PRKCB-202ENST00000321728 ASAH2BP0C7U1 165 aa16.08■□□□□ 0.16
PRKCB-202ENST00000321728 MUC1P15941 1255 aaPredicted RBP16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms