RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 SVIPQ8NHG7 77 aa6.75□□□□□ -1.33
IFT88-201ENST00000319980 PAQR8Q8TEZ7 354 aa6.75□□□□□ -1.33
IFT88-201ENST00000319980 SMIM4Q8WVI0 70 aa6.75□□□□□ -1.33
IFT88-201ENST00000319980 CREB3L1Q96BA8 519 aa6.75□□□□□ -1.33
IFT88-201ENST00000319980 MRI1Q9BV20 369 aa6.75□□□□□ -1.33
IFT88-201ENST00000319980 ANGPTL4Q9BY76 406 aa6.75□□□□□ -1.33
IFT88-201ENST00000319980 PROK2Q9HC23 129 aa6.75□□□□□ -1.33
IFT88-201ENST00000319980 KLHL9Q9P2J3 617 aa6.75□□□□□ -1.33
IFT88-201ENST00000319980 HDGFL3Q9Y3E1 203 aa6.75□□□□□ -1.33
IFT88-201ENST00000319980 R4GMQ9 66 aa6.75□□□□□ -1.33
IFT88-201ENST00000319980 ATP6V1G1O75348 118 aa6.74□□□□□ -1.33
IFT88-201ENST00000319980 HRGP04196 525 aa6.74□□□□□ -1.33
IFT88-201ENST00000319980 ITGA5P08648 1049 aa6.74□□□□□ -1.33
IFT88-201ENST00000319980 RAB40ALP0C0E4 278 aa6.74□□□□□ -1.33
IFT88-201ENST00000319980 ZNF883P0CG24 379 aa6.74□□□□□ -1.33
IFT88-201ENST00000319980 PGA4P0DJD7 388 aa6.74□□□□□ -1.33
IFT88-201ENST00000319980 PGA3P0DJD8 388 aa6.74□□□□□ -1.33
IFT88-201ENST00000319980 ARSBP15848 533 aa6.74□□□□□ -1.33
IFT88-201ENST00000319980 CDK2P24941 298 aa6.74□□□□□ -1.33
IFT88-201ENST00000319980 HLA-DMAP28067 261 aa6.74□□□□□ -1.33
IFT88-201ENST00000319980 LAP3P28838 519 aa6.74□□□□□ -1.33
IFT88-201ENST00000319980 GDNFP39905 211 aa6.74□□□□□ -1.33
IFT88-201ENST00000319980 MLF1P58340 268 aa6.74□□□□□ -1.33
IFT88-201ENST00000319980 PLA2G7Q13093 441 aa6.74□□□□□ -1.33
IFT88-201ENST00000319980 HACD4Q5VWC8 232 aa6.74□□□□□ -1.33
IFT88-201ENST00000319980 ASPHD2Q6ICH7 369 aa6.74□□□□□ -1.33
IFT88-201ENST00000319980 C6orf15Q6UXA7 325 aaPredicted RBP6.74□□□□□ -1.33
IFT88-201ENST00000319980 GTPBP8Q8N3Z3 284 aaPredicted RBP6.74□□□□□ -1.33
IFT88-201ENST00000319980 OR52I2Q8NH67 350 aa6.74□□□□□ -1.33
IFT88-201ENST00000319980 RAB40AQ8WXH6 277 aa6.74□□□□□ -1.33
IFT88-201ENST00000319980 MIB2Q96AX9 1013 aa6.74□□□□□ -1.33
IFT88-201ENST00000319980 HAVCR1Q96D42 359 aa6.74□□□□□ -1.33
IFT88-201ENST00000319980 OXGR1Q96P68 337 aa6.74□□□□□ -1.33
IFT88-201ENST00000319980 STRADBQ9C0K7 418 aa6.74□□□□□ -1.33
IFT88-201ENST00000319980 KLHL13Q9P2N7 655 aa6.74□□□□□ -1.33
IFT88-201ENST00000319980 KLK11Q9UBX7 282 aa6.74□□□□□ -1.33
IFT88-201ENST00000319980 STEAP1Q9UHE8 339 aa6.74□□□□□ -1.33
IFT88-201ENST00000319980 OR52A1Q9UKL2 312 aa6.74□□□□□ -1.33
IFT88-201ENST00000319980 POLR1DQ9Y2S0 133 aa6.74□□□□□ -1.33
IFT88-201ENST00000319980 ZNF726A6NNF4 738 aa6.74□□□□□ -1.33
IFT88-201ENST00000319980 CTDSPLO15194 276 aa6.74□□□□□ -1.33
IFT88-201ENST00000319980 ZIC3O60481 467 aa6.74□□□□□ -1.33
IFT88-201ENST00000319980 TMEM127O75204 238 aa6.74□□□□□ -1.33
IFT88-201ENST00000319980 MT-ND4P03905 459 aa6.74□□□□□ -1.33
IFT88-201ENST00000319980 TRAPPC2P0DI81 140 aa6.74□□□□□ -1.33
IFT88-201ENST00000319980 TRAPPC2BP0DI82 140 aa6.74□□□□□ -1.33
IFT88-201ENST00000319980 LIFP15018 202 aa6.74□□□□□ -1.33
IFT88-201ENST00000319980 FKBP2P26885 142 aaKnown RBP6.74□□□□□ -1.33
IFT88-201ENST00000319980 PTH2RP49190 550 aa6.74□□□□□ -1.33
IFT88-201ENST00000319980 CCR6P51684 374 aa6.74□□□□□ -1.33
IFT88-201ENST00000319980 DSCR4P56555 118 aaPredicted RBP6.74□□□□□ -1.33
IFT88-201ENST00000319980 BCL2L15Q5TBC7 163 aa6.74□□□□□ -1.33
IFT88-201ENST00000319980 TIGD3Q6B0B8 471 aa6.74□□□□□ -1.33
IFT88-201ENST00000319980 PPP1R32Q7Z5V6 425 aa6.74□□□□□ -1.33
IFT88-201ENST00000319980 ZNF227Q86WZ6 799 aa6.74□□□□□ -1.33
IFT88-201ENST00000319980 NOXO1Q8NFA2 376 aa6.74□□□□□ -1.33
IFT88-201ENST00000319980 CAPSLQ8WWF8 208 aa6.74□□□□□ -1.33
IFT88-201ENST00000319980 THRSPQ92748 146 aa6.74□□□□□ -1.33
IFT88-201ENST00000319980 SLAMF6Q96DU3 332 aa6.74□□□□□ -1.33
IFT88-201ENST00000319980 CACNG6Q9BXT2 260 aa6.74□□□□□ -1.33
IFT88-201ENST00000319980 DPAGT1Q9H3H5 408 aa6.74□□□□□ -1.33
IFT88-201ENST00000319980 EMC7Q9NPA0 242 aa6.74□□□□□ -1.33
IFT88-201ENST00000319980 CKLFQ9UBR5 152 aa6.74□□□□□ -1.33
IFT88-201ENST00000319980 CYB5R1Q9UHQ9 305 aa6.74□□□□□ -1.33
IFT88-201ENST00000319980 DKKL1Q9UK85 242 aa6.74□□□□□ -1.33
IFT88-201ENST00000319980 HHLA2Q9UM44 414 aa6.74□□□□□ -1.33
IFT88-201ENST00000319980 FOXJ3Q9UPW0 622 aa6.74□□□□□ -1.33
IFT88-201ENST00000319980 A0A087WZY1 265 aa6.73□□□□□ -1.33
IFT88-201ENST00000319980 IGHV3-15A0A0B4J1V0 119 aa6.73□□□□□ -1.33
IFT88-201ENST00000319980 OR2M5A3KFT3 312 aa6.73□□□□□ -1.33
IFT88-201ENST00000319980 AQP7P3A6NL99 342 aa6.73□□□□□ -1.33
IFT88-201ENST00000319980 GSTZ1O43708 216 aaPredicted RBP6.73□□□□□ -1.33
IFT88-201ENST00000319980 SRSF10O75494 262 aaKnown RBP6.73□□□□□ -1.33
IFT88-201ENST00000319980 TCRBP04435 133 aa6.73□□□□□ -1.33
IFT88-201ENST00000319980 QDPRP09417 244 aa6.73□□□□□ -1.33
IFT88-201ENST00000319980 DNASE1L1P49184 302 aa6.73□□□□□ -1.33
IFT88-201ENST00000319980 CLDN17P56750 224 aa6.73□□□□□ -1.33
IFT88-201ENST00000319980 SLC35A1P78382 337 aa6.73□□□□□ -1.33
IFT88-201ENST00000319980 MRPS15P82914 257 aaKnown RBP6.73□□□□□ -1.33
IFT88-201ENST00000319980 Q0VFX4 171 aa6.73□□□□□ -1.33
IFT88-201ENST00000319980 DEGS2Q6QHC5 323 aa6.73□□□□□ -1.33
IFT88-201ENST00000319980 ADPRHL1Q8NDY3 354 aa6.73□□□□□ -1.33
IFT88-201ENST00000319980 OR13C3Q8NGS6 347 aa6.73□□□□□ -1.33
IFT88-201ENST00000319980 OR6X1Q8NH79 312 aa6.73□□□□□ -1.33
IFT88-201ENST00000319980 CT55Q8WUE5 264 aa6.73□□□□□ -1.33
IFT88-201ENST00000319980 RNF133Q8WVZ7 376 aa6.73□□□□□ -1.33
IFT88-201ENST00000319980 SLC39A7Q92504 469 aa6.73□□□□□ -1.33
IFT88-201ENST00000319980 ZNF486Q96H40 463 aaPredicted RBP6.73□□□□□ -1.33
IFT88-201ENST00000319980 C1orf198Q9H425 327 aa6.73□□□□□ -1.33
IFT88-201ENST00000319980 G6PC2Q9NQR9 355 aa6.73□□□□□ -1.33
IFT88-201ENST00000319980 TAS2R4Q9NYW5 299 aa6.73□□□□□ -1.33
IFT88-201ENST00000319980 CDV3Q9UKY7 258 aaKnown RBP6.73□□□□□ -1.33
IFT88-201ENST00000319980 RCE1Q9Y256 329 aa6.73□□□□□ -1.33
IFT88-201ENST00000319980 FARSAQ9Y285 508 aaKnown RBP6.73□□□□□ -1.33
IFT88-201ENST00000319980 ETV7Q9Y603 341 aa6.73□□□□□ -1.33
IFT88-201ENST00000319980 R4GN57 208 aa6.73□□□□□ -1.33
IFT88-201ENST00000319980 LOC101059948A0A1B0GTJ6 334 aa6.73□□□□□ -1.33
IFT88-201ENST00000319980 LOC107986453A0A1B0GWG9 222 aa6.73□□□□□ -1.33
IFT88-201ENST00000319980 DCDC2BA2VCK2 349 aa6.73□□□□□ -1.33
IFT88-201ENST00000319980 P2RY10O00398 339 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms