RNA–Protein interactions for RNA: ENST00000318988.10

CTDNEP1-201, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,549 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-201ENST00000318988 SPRYD4Q8WW59 207 aaPredicted RBP24.05■■□□□ 1.44
CTDNEP1-201ENST00000318988 GATAD2BQ8WXI9 593 aa24.05■■□□□ 1.44
CTDNEP1-201ENST00000318988 C4orf36Q96KX1 117 aa24.05■■□□□ 1.44
CTDNEP1-201ENST00000318988 MROQ9BYG7 248 aa24.05■■□□□ 1.44
CTDNEP1-201ENST00000318988 RNF121Q9H920 327 aa24.05■■□□□ 1.44
CTDNEP1-201ENST00000318988 CENPMQ9NSP4 180 aa24.05■■□□□ 1.44
CTDNEP1-201ENST00000318988 COQ3Q9NZJ6 369 aa24.05■■□□□ 1.44
CTDNEP1-201ENST00000318988 LCKP06239 509 aa24.05■■□□□ 1.44
CTDNEP1-201ENST00000318988 COX5AP20674 150 aa24.05■■□□□ 1.44
CTDNEP1-201ENST00000318988 PSMB9P28065 219 aa24.05■■□□□ 1.44
CTDNEP1-201ENST00000318988 HOXC12P31275 282 aa24.05■■□□□ 1.44
CTDNEP1-201ENST00000318988 RPL5P46777 297 aaKnown RBP24.05■■□□□ 1.44
CTDNEP1-201ENST00000318988 TP53I3Q53FA7 332 aa24.05■■□□□ 1.44
CTDNEP1-201ENST00000318988 UBE2UQ5VVX9 321 aa24.05■■□□□ 1.44
CTDNEP1-201ENST00000318988 XAF1Q6GPH4 301 aa24.05■■□□□ 1.44
CTDNEP1-201ENST00000318988 OR7E24Q6IFN5 339 aa24.05■■□□□ 1.44
CTDNEP1-201ENST00000318988 SPATC1Q76KD6 591 aa24.05■■□□□ 1.44
CTDNEP1-201ENST00000318988 HIST2H2ABQ8IUE6 130 aaPredicted RBP24.05■■□□□ 1.44
CTDNEP1-201ENST00000318988 SYS1Q8N2H4 156 aa24.05■■□□□ 1.44
CTDNEP1-201ENST00000318988 NANOS1Q8WY41 292 aaKnown RBP24.05■■□□□ 1.44
CTDNEP1-201ENST00000318988 FBXO17Q96EF6 278 aa24.05■■□□□ 1.44
CTDNEP1-201ENST00000318988 IGSF10Q6WRI0 2623 aa24.04■■□□□ 1.44
CTDNEP1-201ENST00000318988 COL6A6A6NMZ7 2263 aa24.04■■□□□ 1.44
CTDNEP1-201ENST00000318988 METTL15A6NJ78 407 aa24.04■■□□□ 1.44
CTDNEP1-201ENST00000318988 PSMD9O00233 223 aa24.04■■□□□ 1.44
CTDNEP1-201ENST00000318988 RAD51DO75771 328 aa24.04■■□□□ 1.44
CTDNEP1-201ENST00000318988 HSMCR30P0CW71 290 aa24.04■■□□□ 1.44
CTDNEP1-201ENST00000318988 GNLYP22749 145 aa24.04■■□□□ 1.44
CTDNEP1-201ENST00000318988 OR12D2P58182 307 aa24.04■■□□□ 1.44
CTDNEP1-201ENST00000318988 TAF13Q15543 124 aa24.04■■□□□ 1.44
CTDNEP1-201ENST00000318988 MTFR2Q6P444 385 aa24.04■■□□□ 1.44
CTDNEP1-201ENST00000318988 DPPA2Q7Z7J5 298 aa24.04■■□□□ 1.44
CTDNEP1-201ENST00000318988 CXorf67Q86X51 503 aaPredicted RBP24.04■■□□□ 1.44
CTDNEP1-201ENST00000318988 YIPF7Q8N8F6 280 aa24.04■■□□□ 1.44
CTDNEP1-201ENST00000318988 C1orf162Q8NEQ5 155 aaPredicted RBP24.04■■□□□ 1.44
CTDNEP1-201ENST00000318988 ST7LQ8TDW4 575 aa24.04■■□□□ 1.44
CTDNEP1-201ENST00000318988 BCL2L2Q92843 193 aaPredicted RBP24.04■■□□□ 1.44
CTDNEP1-201ENST00000318988 SLAMF6Q96DU3 332 aa24.04■■□□□ 1.44
CTDNEP1-201ENST00000318988 OR5M11Q96RB7 305 aa24.04■■□□□ 1.44
CTDNEP1-201ENST00000318988 AMELYQ99218 206 aa24.04■■□□□ 1.44
CTDNEP1-201ENST00000318988 ISG20L2Q9H9L3 353 aaKnown RBP24.04■■□□□ 1.44
CTDNEP1-201ENST00000318988 TIMM10BQ9Y5J6 103 aa24.04■■□□□ 1.44
CTDNEP1-201ENST00000318988 FREM1Q5H8C1 2179 aa24.03■■□□□ 1.44
CTDNEP1-201ENST00000318988 RER1O15258 196 aa24.03■■□□□ 1.44
CTDNEP1-201ENST00000318988 SULT1C4O75897 302 aa24.03■■□□□ 1.44
CTDNEP1-201ENST00000318988 TFAP2AP05549 437 aa24.03■■□□□ 1.44
CTDNEP1-201ENST00000318988 JUNBP17275 347 aaPredicted RBP24.03■■□□□ 1.44
CTDNEP1-201ENST00000318988 BLMHQ13867 455 aa24.03■■□□□ 1.44
CTDNEP1-201ENST00000318988 ZNF474Q6S9Z5 364 aaPredicted RBP24.03■■□□□ 1.44
CTDNEP1-201ENST00000318988 CFAP77Q6ZQR2 320 aa24.03■■□□□ 1.44
CTDNEP1-201ENST00000318988 EGFL6Q8IUX8 553 aa24.03■■□□□ 1.44
CTDNEP1-201ENST00000318988 CCDC36Q8IYA8 594 aa24.03■■□□□ 1.44
CTDNEP1-201ENST00000318988 ZNF679Q8IYX0 411 aa24.03■■□□□ 1.44
CTDNEP1-201ENST00000318988 ZNF843Q8N446 348 aa24.03■■□□□ 1.44
CTDNEP1-201ENST00000318988 MAP6Q96JE9 813 aa24.03■■□□□ 1.44
CTDNEP1-201ENST00000318988 OR8B4Q96RC9 309 aa24.03■■□□□ 1.44
CTDNEP1-201ENST00000318988 A8MXE2 369 aa24.02■■□□□ 1.44
CTDNEP1-201ENST00000318988 MAGEB4O15481 346 aaPredicted RBP24.02■■□□□ 1.44
CTDNEP1-201ENST00000318988 INMTO95050 263 aa24.02■■□□□ 1.44
CTDNEP1-201ENST00000318988 H2BFMP0C1H6 154 aa24.02■■□□□ 1.44
CTDNEP1-201ENST00000318988 CD79AP11912 226 aa24.02■■□□□ 1.44
CTDNEP1-201ENST00000318988 CD79BP40259 229 aa24.02■■□□□ 1.44
CTDNEP1-201ENST00000318988 GBX2P52951 348 aaPredicted RBP24.02■■□□□ 1.44
CTDNEP1-201ENST00000318988 UBE2NP61088 152 aaKnown RBP24.02■■□□□ 1.44
CTDNEP1-201ENST00000318988 ROM1Q03395 351 aa24.02■■□□□ 1.44
CTDNEP1-201ENST00000318988 TIGD6Q17RP2 521 aa24.02■■□□□ 1.44
CTDNEP1-201ENST00000318988 TBRG1Q3YBR2 411 aa24.02■■□□□ 1.44
CTDNEP1-201ENST00000318988 HIKESHIQ53FT3 197 aa24.02■■□□□ 1.44
CTDNEP1-201ENST00000318988 TMEM53Q6P2H8 277 aa24.02■■□□□ 1.44
CTDNEP1-201ENST00000318988 LRRN1Q6UXK5 716 aa24.02■■□□□ 1.44
CTDNEP1-201ENST00000318988 RNF133Q8WVZ7 376 aa24.02■■□□□ 1.44
CTDNEP1-201ENST00000318988 MUL1Q969V5 352 aa24.02■■□□□ 1.44
CTDNEP1-201ENST00000318988 BABAM2Q9NXR7 383 aa24.02■■□□□ 1.44
CTDNEP1-201ENST00000318988 SLCO1C1Q9NYB5 712 aa24.02■■□□□ 1.44
CTDNEP1-201ENST00000318988 PLEK2Q9NYT0 353 aa24.02■■□□□ 1.44
CTDNEP1-201ENST00000318988 LSM2Q9Y333 95 aaKnown RBP24.02■■□□□ 1.44
CTDNEP1-201ENST00000318988 ZNF878C9JN71 531 aa24.01■■□□□ 1.43
CTDNEP1-201ENST00000318988 LRRTM2O43300 516 aa24.01■■□□□ 1.43
CTDNEP1-201ENST00000318988 ZNF254O75437 659 aa24.01■■□□□ 1.43
CTDNEP1-201ENST00000318988 ZNF32P17041 273 aa24.01■■□□□ 1.43
CTDNEP1-201ENST00000318988 IL32P24001 234 aa24.01■■□□□ 1.43
CTDNEP1-201ENST00000318988 CHRNB4P30926 498 aa24.01■■□□□ 1.43
CTDNEP1-201ENST00000318988 RIDAP52758 137 aaKnown RBP24.01■■□□□ 1.43
CTDNEP1-201ENST00000318988 SFRP5Q5T4F7 317 aa24.01■■□□□ 1.43
CTDNEP1-201ENST00000318988 DEGS2Q6QHC5 323 aa24.01■■□□□ 1.43
CTDNEP1-201ENST00000318988 BHLHA15Q7RTS1 189 aaPredicted RBP24.01■■□□□ 1.43
CTDNEP1-201ENST00000318988 KLBQ86Z14 1044 aa24.01■■□□□ 1.43
CTDNEP1-201ENST00000318988 ASB5Q8WWX0 329 aa24.01■■□□□ 1.43
CTDNEP1-201ENST00000318988 COG8Q96MW5 612 aa24.01■■□□□ 1.43
CTDNEP1-201ENST00000318988 MGLLQ99685 303 aa24.01■■□□□ 1.43
CTDNEP1-201ENST00000318988 HDHD5Q9BXW7 423 aa24.01■■□□□ 1.43
CTDNEP1-201ENST00000318988 ELOVL3Q9HB03 270 aa24.01■■□□□ 1.43
CTDNEP1-201ENST00000318988 TRIM36Q9NQ86 728 aa24.01■■□□□ 1.43
CTDNEP1-201ENST00000318988 POLEQ07864 2286 aa24■■□□□ 1.43
CTDNEP1-201ENST00000318988 SGCEO43556 437 aa24■■□□□ 1.43
CTDNEP1-201ENST00000318988 UBL3O95164 117 aa24■■□□□ 1.43
CTDNEP1-201ENST00000318988 PATE4P0C8F1 98 aa24■■□□□ 1.43
CTDNEP1-201ENST00000318988 HOXB1P14653 301 aaPredicted RBP24■■□□□ 1.43
CTDNEP1-201ENST00000318988 ARR3P36575 388 aa24■■□□□ 1.43
CTDNEP1-201ENST00000318988 GABRA6Q16445 453 aa24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms