RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 AVPR2P30518 371 aa4.31□□□□□ -1.72
PTPN13-201ENST00000316707 CDKN2AP42771 156 aaKnown RBP4.31□□□□□ -1.72
PTPN13-201ENST00000316707 SLC6A8P48029 635 aa4.31□□□□□ -1.72
PTPN13-201ENST00000316707 EFNB2P52799 333 aa4.31□□□□□ -1.72
PTPN13-201ENST00000316707 RAB38P57729 211 aa4.31□□□□□ -1.72
PTPN13-201ENST00000316707 WDR38Q5JTN6 314 aa4.31□□□□□ -1.72
PTPN13-201ENST00000316707 CD163Q86VB7 1156 aa4.31□□□□□ -1.72
PTPN13-201ENST00000316707 ARHGEF39Q8N4T4 335 aa4.31□□□□□ -1.72
PTPN13-201ENST00000316707 KCNG3Q8TAE7 436 aa4.31□□□□□ -1.72
PTPN13-201ENST00000316707 PFDN5Q99471 154 aa4.31□□□□□ -1.72
PTPN13-201ENST00000316707 SLC6A7Q99884 636 aa4.31□□□□□ -1.72
PTPN13-201ENST00000316707 MACROD1Q9BQ69 325 aa4.31□□□□□ -1.72
PTPN13-201ENST00000316707 NUDT9Q9BW91 350 aa4.31□□□□□ -1.72
PTPN13-201ENST00000316707 CCL26Q9Y258 94 aa4.31□□□□□ -1.72
PTPN13-201ENST00000316707 RPH3AQ9Y2J0 694 aaPredicted RBP4.31□□□□□ -1.72
PTPN13-201ENST00000316707 TMEM235A6NFC5 223 aa4.31□□□□□ -1.72
PTPN13-201ENST00000316707 LDLRAD4O15165 306 aa4.31□□□□□ -1.72
PTPN13-201ENST00000316707 SFT2D2O95562 160 aa4.31□□□□□ -1.72
PTPN13-201ENST00000316707 IFNA10P01566 189 aa4.31□□□□□ -1.72
PTPN13-201ENST00000316707 GLAP06280 429 aa4.31□□□□□ -1.72
PTPN13-201ENST00000316707 FBXO45P0C2W1 286 aa4.31□□□□□ -1.72
PTPN13-201ENST00000316707 LYL1P12980 280 aa4.31□□□□□ -1.72
PTPN13-201ENST00000316707 C5AR1P21730 350 aa4.31□□□□□ -1.72
PTPN13-201ENST00000316707 PLA2G7Q13093 441 aa4.31□□□□□ -1.72
PTPN13-201ENST00000316707 MLF2Q15773 248 aaPredicted RBP4.31□□□□□ -1.72
PTPN13-201ENST00000316707 CNKSR3Q6P9H4 555 aa4.31□□□□□ -1.72
PTPN13-201ENST00000316707 BTNL8Q6UX41 500 aa4.31□□□□□ -1.72
PTPN13-201ENST00000316707 SLC22A24Q8N4F4 322 aa4.31□□□□□ -1.72
PTPN13-201ENST00000316707 FRMD1Q8N878 549 aa4.31□□□□□ -1.72
PTPN13-201ENST00000316707 EMG1Q92979 244 aaKnown RBP4.31□□□□□ -1.72
PTPN13-201ENST00000316707 TM4SF19Q96DZ7 209 aa4.31□□□□□ -1.72
PTPN13-201ENST00000316707 SELENOIQ9C0D9 397 aa4.31□□□□□ -1.72
PTPN13-201ENST00000316707 PDE7BQ9NP56 450 aa4.31□□□□□ -1.72
PTPN13-201ENST00000316707 NPIPA5A0A0B4J1W7 369 aa4.31□□□□□ -1.72
PTPN13-201ENST00000316707 DBX1A6NMT0 343 aa4.31□□□□□ -1.72
PTPN13-201ENST00000316707 NPIPA7E9PJI5 369 aa4.31□□□□□ -1.72
PTPN13-201ENST00000316707 CTSVO60911 334 aa4.31□□□□□ -1.72
PTPN13-201ENST00000316707 ZNF888P0CJ79 500 aaPredicted RBP4.31□□□□□ -1.72
PTPN13-201ENST00000316707 NPIPA8P0DM63 369 aa4.31□□□□□ -1.72
PTPN13-201ENST00000316707 MUC1P15941 1255 aaPredicted RBP4.31□□□□□ -1.72
PTPN13-201ENST00000316707 SDHBP21912 280 aa4.31□□□□□ -1.72
PTPN13-201ENST00000316707 P2RY2P41231 377 aa4.31□□□□□ -1.72
PTPN13-201ENST00000316707 SNRPNP63162 240 aaKnown RBP4.31□□□□□ -1.72
PTPN13-201ENST00000316707 PDGFRLQ15198 375 aa4.31□□□□□ -1.72
PTPN13-201ENST00000316707 Q3ZCU0 254 aa4.31□□□□□ -1.72
PTPN13-201ENST00000316707 AQP3Q92482 292 aa4.31□□□□□ -1.72
PTPN13-201ENST00000316707 RASD2Q96D21 266 aa4.31□□□□□ -1.72
PTPN13-201ENST00000316707 URM1Q9BTM9 101 aaKnown RBP4.31□□□□□ -1.72
PTPN13-201ENST00000316707 C6orf106Q9H6K1 298 aaPredicted RBP4.31□□□□□ -1.72
PTPN13-201ENST00000316707 CYTL1Q9NRR1 136 aa4.31□□□□□ -1.72
PTPN13-201ENST00000316707 GFOD1Q9NXC2 390 aa4.31□□□□□ -1.72
PTPN13-201ENST00000316707 GPR132Q9UNW8 380 aa4.31□□□□□ -1.72
PTPN13-201ENST00000316707 FKTNO75072 461 aa4.31□□□□□ -1.72
PTPN13-201ENST00000316707 MED6O75586 246 aa4.31□□□□□ -1.72
PTPN13-201ENST00000316707 OR3A2P47893 321 aa4.31□□□□□ -1.72
PTPN13-201ENST00000316707 ETFBKMTQ8IXQ9 262 aa4.31□□□□□ -1.72
PTPN13-201ENST00000316707 ZCCHC10Q8TBK6 192 aa4.31□□□□□ -1.72
PTPN13-201ENST00000316707 PHOSPHO1Q8TCT1 267 aa4.31□□□□□ -1.72
PTPN13-201ENST00000316707 PTCHD1Q96NR3 888 aa4.31□□□□□ -1.72
PTPN13-201ENST00000316707 LMF1Q96S06 567 aa4.31□□□□□ -1.72
PTPN13-201ENST00000316707 SLC17A4Q9Y2C5 497 aa4.31□□□□□ -1.72
PTPN13-201ENST00000316707 GBF1Q92538 1859 aa4.31□□□□□ -1.72
PTPN13-201ENST00000316707 IDSB3KWA1 339 aa4.31□□□□□ -1.72
PTPN13-201ENST00000316707 SEC14L6B5MCN3 397 aa4.31□□□□□ -1.72
PTPN13-201ENST00000316707 RNH1P13489 461 aaKnown RBP4.31□□□□□ -1.72
PTPN13-201ENST00000316707 AKR1C4P17516 323 aa4.31□□□□□ -1.72
PTPN13-201ENST00000316707 FPR2P25090 351 aa4.31□□□□□ -1.72
PTPN13-201ENST00000316707 MMP16P51512 607 aa4.31□□□□□ -1.72
PTPN13-201ENST00000316707 BTG2P78543 158 aa4.31□□□□□ -1.72
PTPN13-201ENST00000316707 PSG6Q00889 435 aa4.31□□□□□ -1.72
PTPN13-201ENST00000316707 GLO1Q04760 184 aa4.31□□□□□ -1.72
PTPN13-201ENST00000316707 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.31□□□□□ -1.72
PTPN13-201ENST00000316707 UNQ6126/PRO20091Q6UXV3 157 aa4.31□□□□□ -1.72
PTPN13-201ENST00000316707 ZBP1Q9H171 429 aa4.31□□□□□ -1.72
PTPN13-201ENST00000316707 GAR1Q9NY12 217 aaKnown RBP4.31□□□□□ -1.72
PTPN13-201ENST00000316707 FBXO4Q9UKT5 387 aa4.31□□□□□ -1.72
PTPN13-201ENST00000316707 TTC3P53804 2025 aa4.31□□□□□ -1.72
PTPN13-201ENST00000316707 PATJQ8NI35 1801 aa4.31□□□□□ -1.72
PTPN13-201ENST00000316707 ELOA3CA0A087WX78 387 aaPredicted RBP4.31□□□□□ -1.72
PTPN13-201ENST00000316707 CPED1A4D0V7 1026 aa4.31□□□□□ -1.72
PTPN13-201ENST00000316707 FAM221BA6H8Z2 402 aa4.31□□□□□ -1.72
PTPN13-201ENST00000316707 CCSO14618 274 aa4.31□□□□□ -1.72
PTPN13-201ENST00000316707 TXNL1O43396 289 aa4.31□□□□□ -1.72
PTPN13-201ENST00000316707 MBTPS2O43462 519 aa4.31□□□□□ -1.72
PTPN13-201ENST00000316707 AKR7A3O95154 331 aa4.31□□□□□ -1.72
PTPN13-201ENST00000316707 IGHV2-70P01814 119 aa4.31□□□□□ -1.72
PTPN13-201ENST00000316707 PCCBP05166 539 aa4.31□□□□□ -1.72
PTPN13-201ENST00000316707 GRPRP30550 384 aa4.31□□□□□ -1.72
PTPN13-201ENST00000316707 KIR3DL2P43630 455 aa4.31□□□□□ -1.72
PTPN13-201ENST00000316707 Q6ZRG5 221 aa4.31□□□□□ -1.72
PTPN13-201ENST00000316707 RNF44Q7L0R7 432 aa4.31□□□□□ -1.72
PTPN13-201ENST00000316707 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.31□□□□□ -1.72
PTPN13-201ENST00000316707 UBAC2Q8NBM4 344 aa4.31□□□□□ -1.72
PTPN13-201ENST00000316707 ZNF248Q8NDW4 579 aa4.31□□□□□ -1.72
PTPN13-201ENST00000316707 OR56B1Q8NGI3 324 aa4.31□□□□□ -1.72
PTPN13-201ENST00000316707 OR4K15Q8NH41 348 aa4.31□□□□□ -1.72
PTPN13-201ENST00000316707 CPNE4Q96A23 557 aaPredicted RBP4.31□□□□□ -1.72
PTPN13-201ENST00000316707 TRIM43Q96BQ3 446 aaPredicted RBP4.31□□□□□ -1.72
PTPN13-201ENST00000316707 TAF9BQ9HBM6 251 aa4.31□□□□□ -1.72
PTPN13-201ENST00000316707 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms