RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 S1PR5Q9H228 398 aa12.53□□□□□ -0.4
SPAST-201ENST00000315285 ANKRD10Q9NXR5 420 aa12.53□□□□□ -0.4
SPAST-201ENST00000315285 A0A1B0GUH1 482 aa12.53□□□□□ -0.4
SPAST-201ENST00000315285 OR6C76A6NM76 312 aa12.53□□□□□ -0.4
SPAST-201ENST00000315285 AKR7A2O43488 359 aa12.53□□□□□ -0.4
SPAST-201ENST00000315285 PCBP3P57721 371 aaKnown RBP12.53□□□□□ -0.4
SPAST-201ENST00000315285 MORN4Q8NDC4 146 aa12.53□□□□□ -0.4
SPAST-201ENST00000315285 OR4N2Q8NGD1 307 aa12.53□□□□□ -0.4
SPAST-201ENST00000315285 ST8SIA1Q92185 356 aa12.53□□□□□ -0.4
SPAST-201ENST00000315285 CCDC74AQ96AQ1 378 aa12.53□□□□□ -0.4
SPAST-201ENST00000315285 SIGLEC11Q96RL6 698 aa12.53□□□□□ -0.4
SPAST-201ENST00000315285 SERGEFQ9UGK8 458 aa12.53□□□□□ -0.4
SPAST-201ENST00000315285 OR2W5A6NFC9 320 aa12.53□□□□□ -0.4
SPAST-201ENST00000315285 ZNF814B7Z6K7 855 aa12.53□□□□□ -0.4
SPAST-201ENST00000315285 F10P00742 488 aa12.53□□□□□ -0.4
SPAST-201ENST00000315285 MSR1P21757 451 aa12.53□□□□□ -0.4
SPAST-201ENST00000315285 UBE2MP61081 183 aaKnown RBP12.53□□□□□ -0.4
SPAST-201ENST00000315285 TMPRSS11FQ6ZWK6 438 aa12.53□□□□□ -0.4
SPAST-201ENST00000315285 APH1BQ8WW43 257 aa12.53□□□□□ -0.4
SPAST-201ENST00000315285 MARC2Q969Z3 335 aa12.53□□□□□ -0.4
SPAST-201ENST00000315285 MOB1AQ9H8S9 216 aa12.53□□□□□ -0.4
SPAST-201ENST00000315285 CYSLTR2Q9NS75 346 aa12.53□□□□□ -0.4
SPAST-201ENST00000315285 SDHAF2Q9NX18 166 aa12.53□□□□□ -0.4
SPAST-201ENST00000315285 SIGLEC7Q9Y286 467 aa12.53□□□□□ -0.4
SPAST-201ENST00000315285 TIMM8BQ9Y5J9 83 aaPredicted RBP12.53□□□□□ -0.4
SPAST-201ENST00000315285 QDPRP09417 244 aa12.53□□□□□ -0.4
SPAST-201ENST00000315285 C21orf58P58505 322 aa12.53□□□□□ -0.4
SPAST-201ENST00000315285 ZNF547Q8IVP9 402 aa12.53□□□□□ -0.4
SPAST-201ENST00000315285 FRZBQ92765 325 aa12.53□□□□□ -0.4
SPAST-201ENST00000315285 CDCP1Q9H5V8 836 aa12.53□□□□□ -0.4
SPAST-201ENST00000315285 PLSCR3Q9NRY6 295 aa12.53□□□□□ -0.4
SPAST-201ENST00000315285 NECAP2Q9NVZ3 263 aa12.53□□□□□ -0.4
SPAST-201ENST00000315285 MED29Q9NX70 200 aa12.53□□□□□ -0.4
SPAST-201ENST00000315285 D6RAR5 112 aa12.52□□□□□ -0.4
SPAST-201ENST00000315285 SGCEO43556 437 aa12.52□□□□□ -0.4
SPAST-201ENST00000315285 LIMS3P0CW19 117 aa12.52□□□□□ -0.4
SPAST-201ENST00000315285 LIMS4P0CW20 117 aa12.52□□□□□ -0.4
SPAST-201ENST00000315285 DCTDP32321 178 aa12.52□□□□□ -0.4
SPAST-201ENST00000315285 CASP6P55212 293 aa12.52□□□□□ -0.4
SPAST-201ENST00000315285 OTPQ5XKR4 325 aa12.52□□□□□ -0.4
SPAST-201ENST00000315285 HSD17B11Q8NBQ5 300 aa12.52□□□□□ -0.4
SPAST-201ENST00000315285 TP53I13Q8NBR0 393 aaPredicted RBP12.52□□□□□ -0.4
SPAST-201ENST00000315285 SEMA6DQ8NFY4 1073 aa12.52□□□□□ -0.4
SPAST-201ENST00000315285 RBMXL1Q96E39 390 aaKnown RBP12.52□□□□□ -0.4
SPAST-201ENST00000315285 SLAMF7Q9NQ25 335 aa12.52□□□□□ -0.4
SPAST-201ENST00000315285 B3GALT5Q9Y2C3 310 aa12.52□□□□□ -0.4
SPAST-201ENST00000315285 CCL27Q9Y4X3 112 aa12.52□□□□□ -0.4
SPAST-201ENST00000315285 PUS1Q9Y606 427 aaKnown RBP eCLIP12.52□□□□□ -0.4
SPAST-201ENST00000315285 KIF13BQ9NQT8 1826 aa12.52□□□□□ -0.4
SPAST-201ENST00000315285 RPS10-NUDT3A0A1W2PQS6 291 aa12.52□□□□□ -0.41
SPAST-201ENST00000315285 RNF212BA8MTL3 300 aa12.52□□□□□ -0.41
SPAST-201ENST00000315285 TOR1AO14656 332 aa12.52□□□□□ -0.41
SPAST-201ENST00000315285 ALOX5APP20292 161 aa12.52□□□□□ -0.41
SPAST-201ENST00000315285 RPS10P46783 165 aaKnown RBP12.52□□□□□ -0.41
SPAST-201ENST00000315285 PNLIPRP2P54317 469 aa12.52□□□□□ -0.41
SPAST-201ENST00000315285 PHLDA2Q53GA4 152 aa12.52□□□□□ -0.41
SPAST-201ENST00000315285 BPHLQ86WA6 291 aaPredicted RBP12.52□□□□□ -0.41
SPAST-201ENST00000315285 ZG16BQ96DA0 208 aa12.52□□□□□ -0.41
SPAST-201ENST00000315285 WDFY2Q96P53 400 aa12.52□□□□□ -0.41
SPAST-201ENST00000315285 TRBV5-3A0A0A0MS03 114 aa12.52□□□□□ -0.41
SPAST-201ENST00000315285 A0A0U1RQK1 487 aa12.52□□□□□ -0.41
SPAST-201ENST00000315285 A0A1W2PNR3 127 aa12.52□□□□□ -0.41
SPAST-201ENST00000315285 A0A1W2PPV4 95 aa12.52□□□□□ -0.41
SPAST-201ENST00000315285 FRG2CA6NGY1 282 aa12.52□□□□□ -0.41
SPAST-201ENST00000315285 YKT6O15498 198 aa12.52□□□□□ -0.41
SPAST-201ENST00000315285 VAMP5O95183 116 aa12.52□□□□□ -0.41
SPAST-201ENST00000315285 CD3DP04234 171 aa12.52□□□□□ -0.41
SPAST-201ENST00000315285 CLINT1Q14677 625 aa12.52□□□□□ -0.41
SPAST-201ENST00000315285 OR52N5Q8NH56 324 aa12.52□□□□□ -0.41
SPAST-201ENST00000315285 UCN3Q969E3 161 aa12.52□□□□□ -0.41
SPAST-201ENST00000315285 NKX3-1Q99801 234 aaPredicted RBP12.52□□□□□ -0.41
SPAST-201ENST00000315285 PTDSS2Q9BVG9 487 aa12.52□□□□□ -0.41
SPAST-201ENST00000315285 A0A0B4J2E0 115 aa12.52□□□□□ -0.41
SPAST-201ENST00000315285 A0A1B0GX12 115 aa12.52□□□□□ -0.41
SPAST-201ENST00000315285 ZNF587BE7ETH6 402 aa12.52□□□□□ -0.41
SPAST-201ENST00000315285 CATR1Q13166 79 aa12.52□□□□□ -0.41
SPAST-201ENST00000315285 TCTE3Q8IZS6 198 aa12.52□□□□□ -0.41
SPAST-201ENST00000315285 PLPP5Q8NEB5 264 aa12.52□□□□□ -0.41
SPAST-201ENST00000315285 LRRC46Q96FV0 321 aa12.52□□□□□ -0.41
SPAST-201ENST00000315285 EXOSC3Q9NQT5 275 aaKnown RBP12.52□□□□□ -0.41
SPAST-201ENST00000315285 SLCO1C1Q9NYB5 712 aa12.52□□□□□ -0.41
SPAST-201ENST00000315285 A0A087WUJ7 227 aa12.51□□□□□ -0.41
SPAST-201ENST00000315285 MMP15P51511 669 aa12.51□□□□□ -0.41
SPAST-201ENST00000315285 THEM4Q5T1C6 240 aa12.51□□□□□ -0.41
SPAST-201ENST00000315285 SFRP5Q5T4F7 317 aa12.51□□□□□ -0.41
SPAST-201ENST00000315285 LGI3Q8N145 548 aa12.51□□□□□ -0.41
SPAST-201ENST00000315285 ARL5BQ96KC2 179 aa12.51□□□□□ -0.41
SPAST-201ENST00000315285 GCM1Q9NP62 436 aa12.51□□□□□ -0.41
SPAST-201ENST00000315285 KLK11Q9UBX7 282 aa12.51□□□□□ -0.41
SPAST-201ENST00000315285 LHX6Q9UPM6 363 aa12.51□□□□□ -0.41
SPAST-201ENST00000315285 R4GMQ9 66 aa12.51□□□□□ -0.41
SPAST-201ENST00000315285 THSD7AQ9UPZ6 1657 aa12.51□□□□□ -0.41
SPAST-201ENST00000315285 DOCK5Q9H7D0 1870 aa12.51□□□□□ -0.41
SPAST-201ENST00000315285 SNRPGP15A8MWD9 76 aa12.51□□□□□ -0.41
SPAST-201ENST00000315285 OR2F2O95006 317 aa12.51□□□□□ -0.41
SPAST-201ENST00000315285 UBE2KP61086 200 aa12.51□□□□□ -0.41
SPAST-201ENST00000315285 OR2F1Q13607 317 aa12.51□□□□□ -0.41
SPAST-201ENST00000315285 IL10RAQ13651 578 aa12.51□□□□□ -0.41
SPAST-201ENST00000315285 HMGN3Q15651 99 aa12.51□□□□□ -0.41
SPAST-201ENST00000315285 TRIM61Q5EBN2 209 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms