RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 POLDIP2Q9Y2S7 368 aa12.25□□□□□ -0.45
RFFL-201ENST00000315249 CNOT1A5YKK6 2376 aaKnown RBP12.25□□□□□ -0.45
RFFL-201ENST00000315249 SPTBN2O15020 2390 aa12.25□□□□□ -0.45
RFFL-201ENST00000315249 Q499Y3 187 aa12.25□□□□□ -0.45
RFFL-201ENST00000315249 DHRS4L2Q6PKH6 230 aa12.25□□□□□ -0.45
RFFL-201ENST00000315249 APOOLQ6UXV4 268 aa12.25□□□□□ -0.45
RFFL-201ENST00000315249 S100A7AQ86SG5 101 aa12.25□□□□□ -0.45
RFFL-201ENST00000315249 KIF25Q9UIL4 384 aa12.25□□□□□ -0.45
RFFL-201ENST00000315249 LYRM1O43325 122 aa12.25□□□□□ -0.45
RFFL-201ENST00000315249 POU2F2P09086 479 aa12.25□□□□□ -0.45
RFFL-201ENST00000315249 TMIGD3P0DMS9 266 aaPredicted RBP12.25□□□□□ -0.45
RFFL-201ENST00000315249 RPS27P42677 84 aaKnown RBP12.25□□□□□ -0.45
RFFL-201ENST00000315249 RNLSQ5VYX0 342 aa12.25□□□□□ -0.45
RFFL-201ENST00000315249 METAP1DQ6UB28 335 aaPredicted RBP12.25□□□□□ -0.45
RFFL-201ENST00000315249 OLIG1Q8TAK6 271 aa12.25□□□□□ -0.45
RFFL-201ENST00000315249 HAS2Q92819 552 aa12.25□□□□□ -0.45
RFFL-201ENST00000315249 ISL2Q96A47 359 aa12.25□□□□□ -0.45
RFFL-201ENST00000315249 ONECUT1Q9UBC0 465 aa12.25□□□□□ -0.45
RFFL-201ENST00000315249 AHCTF1Q8WYP5 2266 aa12.25□□□□□ -0.45
RFFL-201ENST00000315249 A0A1W2PPV4 95 aa12.25□□□□□ -0.45
RFFL-201ENST00000315249 LYZL6O75951 148 aa12.25□□□□□ -0.45
RFFL-201ENST00000315249 PMP2P02689 132 aa12.25□□□□□ -0.45
RFFL-201ENST00000315249 RAB40ALP0C0E4 278 aa12.25□□□□□ -0.45
RFFL-201ENST00000315249 CPT2P23786 658 aa12.25□□□□□ -0.45
RFFL-201ENST00000315249 S100PP25815 95 aa12.25□□□□□ -0.45
RFFL-201ENST00000315249 PTPN6P29350 595 aa12.25□□□□□ -0.45
RFFL-201ENST00000315249 RBP2P50120 134 aa12.25□□□□□ -0.45
RFFL-201ENST00000315249 RAB35Q15286 201 aa12.25□□□□□ -0.45
RFFL-201ENST00000315249 DMRTC1Q5HYR2 192 aa12.25□□□□□ -0.45
RFFL-201ENST00000315249 RAB40AQ8WXH6 277 aa12.25□□□□□ -0.45
RFFL-201ENST00000315249 PPIL1Q9Y3C6 166 aa12.25□□□□□ -0.45
RFFL-201ENST00000315249 I3L521 148 aa12.25□□□□□ -0.45
RFFL-201ENST00000315249 FTH1P19P0C7X4 201 aa12.25□□□□□ -0.45
RFFL-201ENST00000315249 WDR74Q6RFH5 385 aaPredicted RBP12.25□□□□□ -0.45
RFFL-201ENST00000315249 DLEU7Q6UYE1 221 aa12.25□□□□□ -0.45
RFFL-201ENST00000315249 PELI3Q8N2H9 469 aa12.25□□□□□ -0.45
RFFL-201ENST00000315249 CCDC32Q9BV29 185 aa12.25□□□□□ -0.45
RFFL-201ENST00000315249 UBTD1Q9HAC8 227 aa12.25□□□□□ -0.45
RFFL-201ENST00000315249 NRASP01111 189 aa12.24□□□□□ -0.45
RFFL-201ENST00000315249 APOA2P02652 100 aa12.24□□□□□ -0.45
RFFL-201ENST00000315249 MRPL19P49406 292 aaKnown RBP12.24□□□□□ -0.45
RFFL-201ENST00000315249 NKG7Q16617 165 aa12.24□□□□□ -0.45
RFFL-201ENST00000315249 C19orf48Q6RUI8 117 aa12.24□□□□□ -0.45
RFFL-201ENST00000315249 DOK3Q7L591 496 aa12.24□□□□□ -0.45
RFFL-201ENST00000315249 FGF11Q92914 225 aa12.24□□□□□ -0.45
RFFL-201ENST00000315249 SHARPINQ9H0F6 387 aa12.24□□□□□ -0.45
RFFL-201ENST00000315249 PPA2Q9H2U2 334 aa12.24□□□□□ -0.45
RFFL-201ENST00000315249 TNFRSF19Q9NS68 423 aa12.24□□□□□ -0.45
RFFL-201ENST00000315249 ASIC5Q9NY37 505 aa12.24□□□□□ -0.45
RFFL-201ENST00000315249 H7C1Q1 480 aa12.24□□□□□ -0.45
RFFL-201ENST00000315249 MRPS14O60783 128 aaKnown RBP12.24□□□□□ -0.45
RFFL-201ENST00000315249 IFNA10P01566 189 aa12.24□□□□□ -0.45
RFFL-201ENST00000315249 S100A7P31151 101 aa12.24□□□□□ -0.45
RFFL-201ENST00000315249 SHEQ5VZ18 495 aa12.24□□□□□ -0.45
RFFL-201ENST00000315249 ZNF679Q8IYX0 411 aa12.24□□□□□ -0.45
RFFL-201ENST00000315249 HLA-AP01891 365 aaKnown RBP12.24□□□□□ -0.45
RFFL-201ENST00000315249 KITLGP21583 273 aa12.24□□□□□ -0.45
RFFL-201ENST00000315249 SPACA5Q96QH8 159 aa12.24□□□□□ -0.45
RFFL-201ENST00000315249 GDF15Q99988 308 aa12.24□□□□□ -0.45
RFFL-201ENST00000315249 GIFP27352 417 aa12.24□□□□□ -0.45
RFFL-201ENST00000315249 EIF2S3LQ2VIR3 472 aaKnown RBP12.24□□□□□ -0.45
RFFL-201ENST00000315249 PMS2CLQ68D20 193 aa12.24□□□□□ -0.45
RFFL-201ENST00000315249 CXorf67Q86X51 503 aaPredicted RBP12.24□□□□□ -0.45
RFFL-201ENST00000315249 ZNF547Q8IVP9 402 aa12.24□□□□□ -0.45
RFFL-201ENST00000315249 OR10J5Q8NHC4 309 aa12.24□□□□□ -0.45
RFFL-201ENST00000315249 LGALS14Q8TCE9 139 aa12.24□□□□□ -0.45
RFFL-201ENST00000315249 ATF6BQ99941 703 aa12.24□□□□□ -0.45
RFFL-201ENST00000315249 ERVMER34-1Q9H9K5 563 aa12.24□□□□□ -0.45
RFFL-201ENST00000315249 MEIKINA0A087WXM9 373 aa12.24□□□□□ -0.45
RFFL-201ENST00000315249 SLC16A6O15403 523 aa12.24□□□□□ -0.45
RFFL-201ENST00000315249 ANXA7P20073 488 aaKnown RBP12.24□□□□□ -0.45
RFFL-201ENST00000315249 AKR1C1Q04828 323 aa12.24□□□□□ -0.45
RFFL-201ENST00000315249 UBE2FQ969M7 185 aa12.24□□□□□ -0.45
RFFL-201ENST00000315249 KCNJ15Q99712 375 aa12.24□□□□□ -0.45
RFFL-201ENST00000315249 NRXN2Q9P2S2 1712 aa12.23□□□□□ -0.45
RFFL-201ENST00000315249 F5H5P2 479 aa12.23□□□□□ -0.45
RFFL-201ENST00000315249 PHLDA2Q53GA4 152 aa12.23□□□□□ -0.45
RFFL-201ENST00000315249 METTL11BQ5VVY1 283 aa12.23□□□□□ -0.45
RFFL-201ENST00000315249 PIWIL3Q7Z3Z3 882 aaKnown RBP12.23□□□□□ -0.45
RFFL-201ENST00000315249 LRRC28Q86X40 367 aaPredicted RBP12.23□□□□□ -0.45
RFFL-201ENST00000315249 GPR84Q9NQS5 396 aa12.23□□□□□ -0.45
RFFL-201ENST00000315249 OR5H15A6NDH6 313 aa12.23□□□□□ -0.45
RFFL-201ENST00000315249 GABARAPH6UMI1 98 aa12.23□□□□□ -0.45
RFFL-201ENST00000315249 GABARAPO95166 117 aa12.23□□□□□ -0.45
RFFL-201ENST00000315249 TFP02787 698 aa12.23□□□□□ -0.45
RFFL-201ENST00000315249 IGFBP1P08833 259 aaPredicted RBP12.23□□□□□ -0.45
RFFL-201ENST00000315249 SPRED3Q2MJR0 410 aa12.23□□□□□ -0.45
RFFL-201ENST00000315249 EMC4Q5J8M3 183 aa12.23□□□□□ -0.45
RFFL-201ENST00000315249 MZB1Q8WU39 189 aa12.23□□□□□ -0.45
RFFL-201ENST00000315249 RND1Q92730 232 aa12.23□□□□□ -0.45
RFFL-201ENST00000315249 PRDM7Q9NQW5 492 aa12.23□□□□□ -0.45
RFFL-201ENST00000315249 GMEB1Q9Y692 573 aa12.23□□□□□ -0.45
RFFL-201ENST00000315249 PIKFYVEQ9Y2I7 2098 aa12.23□□□□□ -0.45
RFFL-201ENST00000315249 PRSS37A4D1T9 235 aa12.23□□□□□ -0.45
RFFL-201ENST00000315249 SP9P0CG40 484 aa12.23□□□□□ -0.45
RFFL-201ENST00000315249 RAB1AP62820 205 aa12.23□□□□□ -0.45
RFFL-201ENST00000315249 FZD5Q13467 585 aa12.23□□□□□ -0.45
RFFL-201ENST00000315249 AMER3Q8N944 861 aa12.23□□□□□ -0.45
RFFL-201ENST00000315249 CENPOQ9BU64 300 aa12.23□□□□□ -0.45
RFFL-201ENST00000315249 RIMS4Q9H426 269 aaPredicted RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms