RNA–Protein interactions for RNA: ENST00000311487.9

HMGA1-201, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-201ENST00000311487 AQP6Q13520 282 aa15.89■□□□□ 0.13
HMGA1-201ENST00000311487 CTF1Q16619 201 aa15.89■□□□□ 0.13
HMGA1-201ENST00000311487 RNASE6Q93091 150 aaKnown RBP15.89■□□□□ 0.13
HMGA1-201ENST00000311487 FBXO17Q96EF6 278 aa15.89■□□□□ 0.13
HMGA1-201ENST00000311487 WFIKKN1Q96NZ8 548 aa15.89■□□□□ 0.13
HMGA1-201ENST00000311487 NOX3Q9HBY0 568 aa15.89■□□□□ 0.13
HMGA1-201ENST00000311487 POLE4Q9NR33 117 aa15.89■□□□□ 0.13
HMGA1-201ENST00000311487 ZNF224Q9NZL3 707 aa15.89■□□□□ 0.13
HMGA1-201ENST00000311487 HCFC1P51610 2035 aa15.88■□□□□ 0.13
HMGA1-201ENST00000311487 CLDN1O95832 211 aa15.88■□□□□ 0.13
HMGA1-201ENST00000311487 GAAP10253 952 aa15.88■□□□□ 0.13
HMGA1-201ENST00000311487 NR4A1P22736 598 aa15.88■□□□□ 0.13
HMGA1-201ENST00000311487 ZNF133P52736 654 aaPredicted RBP15.88■□□□□ 0.13
HMGA1-201ENST00000311487 ADAM8P78325 824 aa15.88■□□□□ 0.13
HMGA1-201ENST00000311487 ST3GAL4Q11206 333 aa15.88■□□□□ 0.13
HMGA1-201ENST00000311487 NXNL2Q5VZ03 156 aa15.88■□□□□ 0.13
HMGA1-201ENST00000311487 ANKRD16Q6P6B7 361 aa15.88■□□□□ 0.13
HMGA1-201ENST00000311487 DNM1P34Q6PK57 102 aa15.88■□□□□ 0.13
HMGA1-201ENST00000311487 MEPCEQ7L2J0 689 aaKnown RBP15.88■□□□□ 0.13
HMGA1-201ENST00000311487 SLC26A10Q8NG04 563 aa15.88■□□□□ 0.13
HMGA1-201ENST00000311487 FCGR1BQ92637 280 aa15.88■□□□□ 0.13
HMGA1-201ENST00000311487 SNX18Q96RF0 628 aa15.88■□□□□ 0.13
HMGA1-201ENST00000311487 RACGAP1Q9H0H5 632 aa15.88■□□□□ 0.13
HMGA1-201ENST00000311487 CNOT2Q9NZN8 540 aaKnown RBP15.88■□□□□ 0.13
HMGA1-201ENST00000311487 GLCEO94923 617 aa15.88■□□□□ 0.13
HMGA1-201ENST00000311487 OR8G3PP0DMU2 310 aa15.88■□□□□ 0.13
HMGA1-201ENST00000311487 NR2C1P13056 603 aa15.88■□□□□ 0.13
HMGA1-201ENST00000311487 ZNF182P17025 639 aaPredicted RBP15.88■□□□□ 0.13
HMGA1-201ENST00000311487 AGAP20933 346 aa15.88■□□□□ 0.13
HMGA1-201ENST00000311487 SLC15A1P46059 708 aa15.88■□□□□ 0.13
HMGA1-201ENST00000311487 HSF2Q03933 536 aa15.88■□□□□ 0.13
HMGA1-201ENST00000311487 IRF3Q14653 427 aa15.88■□□□□ 0.13
HMGA1-201ENST00000311487 TAB1Q15750 504 aa15.88■□□□□ 0.13
HMGA1-201ENST00000311487 CRYBG3Q68DQ2 2970 aa15.88■□□□□ 0.13
HMGA1-201ENST00000311487 SPATC1Q76KD6 591 aa15.88■□□□□ 0.13
HMGA1-201ENST00000311487 SLC16A14Q7RTX9 510 aa15.88■□□□□ 0.13
HMGA1-201ENST00000311487 STX19Q8N4C7 294 aa15.88■□□□□ 0.13
HMGA1-201ENST00000311487 WDR31Q8NA23 367 aa15.88■□□□□ 0.13
HMGA1-201ENST00000311487 OR51G2Q8NGK0 314 aa15.88■□□□□ 0.13
HMGA1-201ENST00000311487 FNDC8Q8TC99 324 aa15.88■□□□□ 0.13
HMGA1-201ENST00000311487 TRUB1Q8WWH5 349 aaKnown RBP15.88■□□□□ 0.13
HMGA1-201ENST00000311487 ASH2LQ9UBL3 628 aa15.88■□□□□ 0.13
HMGA1-201ENST00000311487 POLR1DQ9Y2S0 133 aa15.88■□□□□ 0.13
HMGA1-201ENST00000311487 ICE1Q9Y2F5 2266 aa15.87■□□□□ 0.13
HMGA1-201ENST00000311487 DOPEY2Q9Y3R5 2298 aa15.87■□□□□ 0.13
HMGA1-201ENST00000311487 EFCAB10A6NFE3 127 aa15.87■□□□□ 0.13
HMGA1-201ENST00000311487 ADRA2AP08913 450 aa15.87■□□□□ 0.13
HMGA1-201ENST00000311487 SPARCP09486 303 aa15.87■□□□□ 0.13
HMGA1-201ENST00000311487 PSMB1P20618 241 aaKnown RBP15.87■□□□□ 0.13
HMGA1-201ENST00000311487 MSR1P21757 451 aa15.87■□□□□ 0.13
HMGA1-201ENST00000311487 TGFBR2P37173 567 aa15.87■□□□□ 0.13
HMGA1-201ENST00000311487 MRPS34P82930 218 aaKnown RBP15.87■□□□□ 0.13
HMGA1-201ENST00000311487 ENDOGQ14249 297 aaKnown RBP15.87■□□□□ 0.13
HMGA1-201ENST00000311487 SPCS2Q15005 226 aa15.87■□□□□ 0.13
HMGA1-201ENST00000311487 TBX5Q99593 518 aa15.87■□□□□ 0.13
HMGA1-201ENST00000311487 BCL7BQ9BQE9 202 aa15.87■□□□□ 0.13
HMGA1-201ENST00000311487 MED18Q9BUE0 208 aa15.87■□□□□ 0.13
HMGA1-201ENST00000311487 CDADC1Q9BWV3 514 aa15.87■□□□□ 0.13
HMGA1-201ENST00000311487 SIAEQ9HAT2 523 aa15.87■□□□□ 0.13
HMGA1-201ENST00000311487 USP9YO00507 2555 aaPredicted RBP15.86■□□□□ 0.13
HMGA1-201ENST00000311487 PRSS44E7EML9 344 aa15.86■□□□□ 0.13
HMGA1-201ENST00000311487 ZNF593O00488 134 aaPredicted RBP15.86■□□□□ 0.13
HMGA1-201ENST00000311487 RER1O15258 196 aa15.86■□□□□ 0.13
HMGA1-201ENST00000311487 CELA3BP08861 270 aa15.86■□□□□ 0.13
HMGA1-201ENST00000311487 PIPP12273 146 aaPredicted RBP15.86■□□□□ 0.13
HMGA1-201ENST00000311487 COL8A1P27658 744 aa15.86■□□□□ 0.13
HMGA1-201ENST00000311487 UBE2NP61088 152 aaKnown RBP15.86■□□□□ 0.13
HMGA1-201ENST00000311487 DPY19L4Q7Z388 723 aa15.86■□□□□ 0.13
HMGA1-201ENST00000311487 WFDC8Q8IUA0 241 aa15.86■□□□□ 0.13
HMGA1-201ENST00000311487 OR4F15Q8NGB8 312 aa15.86■□□□□ 0.13
HMGA1-201ENST00000311487 OR6N2Q8NGY6 317 aa15.86■□□□□ 0.13
HMGA1-201ENST00000311487 MS4A3Q96HJ5 214 aa15.86■□□□□ 0.13
HMGA1-201ENST00000311487 RNF121Q9H920 327 aa15.86■□□□□ 0.13
HMGA1-201ENST00000311487 OR5H1A6NKK0 313 aa15.86■□□□□ 0.13
HMGA1-201ENST00000311487 PRODHO43272 600 aa15.86■□□□□ 0.13
HMGA1-201ENST00000311487 ZNF823P16415 610 aa15.86■□□□□ 0.13
HMGA1-201ENST00000311487 HOXC12P31275 282 aa15.86■□□□□ 0.13
HMGA1-201ENST00000311487 FBXL19-AS1Q494R0 122 aa15.86■□□□□ 0.13
HMGA1-201ENST00000311487 OR7E24Q6IFN5 339 aa15.86■□□□□ 0.13
HMGA1-201ENST00000311487 MDP1Q86V88 176 aa15.86■□□□□ 0.13
HMGA1-201ENST00000311487 MYPOPQ86VE0 399 aaPredicted RBP15.86■□□□□ 0.13
HMGA1-201ENST00000311487 P2RY8Q86VZ1 359 aa15.86■□□□□ 0.13
HMGA1-201ENST00000311487 RFLNBQ8N5W9 214 aa15.86■□□□□ 0.13
HMGA1-201ENST00000311487 OR10H5Q8NGA6 315 aa15.86■□□□□ 0.13
HMGA1-201ENST00000311487 AKR7LQ8NHP1 331 aa15.86■□□□□ 0.13
HMGA1-201ENST00000311487 Q96MT0 163 aa15.86■□□□□ 0.13
HMGA1-201ENST00000311487 SLC17A5Q9NRA2 495 aa15.86■□□□□ 0.13
HMGA1-201ENST00000311487 LHFPL6Q9Y693 200 aa15.86■□□□□ 0.13
HMGA1-201ENST00000311487 DCHS2Q6V1P9 2916 aa15.85■□□□□ 0.13
HMGA1-201ENST00000311487 TUBAL3A6NHL2 446 aa15.85■□□□□ 0.13
HMGA1-201ENST00000311487 PSMD9O00233 223 aa15.85■□□□□ 0.13
HMGA1-201ENST00000311487 FARS2O95363 451 aaKnown RBP15.85■□□□□ 0.13
HMGA1-201ENST00000311487 WNT11O96014 354 aa15.85■□□□□ 0.13
HMGA1-201ENST00000311487 PTHP01270 115 aa15.85■□□□□ 0.13
HMGA1-201ENST00000311487 THBDP07204 575 aa15.85■□□□□ 0.13
HMGA1-201ENST00000311487 CCL2P13500 99 aa15.85■□□□□ 0.13
HMGA1-201ENST00000311487 ZNF32P17041 273 aa15.85■□□□□ 0.13
HMGA1-201ENST00000311487 ATP6V1E1P36543 226 aa15.85■□□□□ 0.13
HMGA1-201ENST00000311487 ZNF83P51522 516 aa15.85■□□□□ 0.13
HMGA1-201ENST00000311487 OCLNQ16625 522 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms