RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 CMBLQ96DG6 245 aa11.47□□□□□ -0.57
RETREG3-201ENST00000309428 ZNF576Q9H609 170 aa11.47□□□□□ -0.57
RETREG3-201ENST00000309428 OPN4Q9UHM6 478 aa11.47□□□□□ -0.57
RETREG3-201ENST00000309428 TGFBR3LH3BV60 316 aa11.47□□□□□ -0.57
RETREG3-201ENST00000309428 GPRIN2O60269 458 aa11.47□□□□□ -0.57
RETREG3-201ENST00000309428 SCGNO76038 276 aa11.47□□□□□ -0.57
RETREG3-201ENST00000309428 SLC2A1P11166 492 aa11.47□□□□□ -0.57
RETREG3-201ENST00000309428 TPT1P13693 172 aaKnown RBP11.47□□□□□ -0.57
RETREG3-201ENST00000309428 RORAP35398 523 aa11.47□□□□□ -0.57
RETREG3-201ENST00000309428 PRSS12P56730 875 aa11.47□□□□□ -0.57
RETREG3-201ENST00000309428 PLCXD2Q0VAA5 305 aa11.47□□□□□ -0.57
RETREG3-201ENST00000309428 FZD2Q14332 565 aa11.47□□□□□ -0.57
RETREG3-201ENST00000309428 ZNF529Q6P280 563 aa11.47□□□□□ -0.57
RETREG3-201ENST00000309428 P4HA3Q7Z4N8 544 aa11.47□□□□□ -0.57
RETREG3-201ENST00000309428 NUBPLQ8TB37 319 aa11.47□□□□□ -0.57
RETREG3-201ENST00000309428 FAM71F1Q96KD3 344 aaPredicted RBP11.47□□□□□ -0.57
RETREG3-201ENST00000309428 USB1Q9BQ65 265 aaKnown RBP11.47□□□□□ -0.57
RETREG3-201ENST00000309428 WDR76Q9H967 626 aa11.47□□□□□ -0.57
RETREG3-201ENST00000309428 APMAPQ9HDC9 416 aa11.47□□□□□ -0.57
RETREG3-201ENST00000309428 PILRAQ9UKJ1 303 aa11.47□□□□□ -0.57
RETREG3-201ENST00000309428 COL4A4P53420 1690 aaPredicted RBP11.47□□□□□ -0.57
RETREG3-201ENST00000309428 A0A087WV62 115 aa11.47□□□□□ -0.57
RETREG3-201ENST00000309428 RPS10-NUDT3A0A1W2PQS6 291 aa11.47□□□□□ -0.57
RETREG3-201ENST00000309428 TSPAN15O95858 294 aa11.47□□□□□ -0.57
RETREG3-201ENST00000309428 CFIP05156 583 aa11.47□□□□□ -0.57
RETREG3-201ENST00000309428 CD1CP29017 333 aa11.47□□□□□ -0.57
RETREG3-201ENST00000309428 RPS10P46783 165 aaKnown RBP11.47□□□□□ -0.57
RETREG3-201ENST00000309428 ATP1B3P54709 279 aa11.47□□□□□ -0.57
RETREG3-201ENST00000309428 TAS2R19P59542 299 aa11.47□□□□□ -0.57
RETREG3-201ENST00000309428 GUCA2BQ16661 112 aa11.47□□□□□ -0.57
RETREG3-201ENST00000309428 SLC22A6Q4U2R8 563 aa11.47□□□□□ -0.57
RETREG3-201ENST00000309428 OR2W3Q7Z3T1 314 aa11.47□□□□□ -0.57
RETREG3-201ENST00000309428 TRAPPC6BQ86SZ2 158 aa11.47□□□□□ -0.57
RETREG3-201ENST00000309428 SLAMF9Q96A28 289 aa11.47□□□□□ -0.57
RETREG3-201ENST00000309428 KTI12Q96EK9 354 aaPredicted RBP11.47□□□□□ -0.57
RETREG3-201ENST00000309428 PUS1Q9Y606 427 aaKnown RBP eCLIP11.47□□□□□ -0.57
RETREG3-201ENST00000309428 DAOP14920 347 aa11.46□□□□□ -0.57
RETREG3-201ENST00000309428 SFTPDP35247 375 aa11.46□□□□□ -0.57
RETREG3-201ENST00000309428 RABIFP47224 123 aa11.46□□□□□ -0.57
RETREG3-201ENST00000309428 RIDAP52758 137 aaKnown RBP11.46□□□□□ -0.57
RETREG3-201ENST00000309428 DUSP8Q13202 625 aa11.46□□□□□ -0.57
RETREG3-201ENST00000309428 KLF9Q13886 244 aaPredicted RBP11.46□□□□□ -0.57
RETREG3-201ENST00000309428 HNF4GQ14541 408 aa11.46□□□□□ -0.57
RETREG3-201ENST00000309428 C2orf76Q3KRA6 126 aa11.46□□□□□ -0.57
RETREG3-201ENST00000309428 FAM122BQ7Z309 247 aa11.46□□□□□ -0.57
RETREG3-201ENST00000309428 BCORP1Q8N888 145 aa11.46□□□□□ -0.57
RETREG3-201ENST00000309428 OR51A4Q8NGJ6 313 aa11.46□□□□□ -0.57
RETREG3-201ENST00000309428 ANKRD9Q96BM1 317 aaPredicted RBP11.46□□□□□ -0.57
RETREG3-201ENST00000309428 KLHL15Q96M94 604 aa11.46□□□□□ -0.57
RETREG3-201ENST00000309428 SULT4A1Q9BR01 284 aa11.46□□□□□ -0.57
RETREG3-201ENST00000309428 KIF26AQ9ULI4 1882 aaPredicted RBP11.46□□□□□ -0.57
RETREG3-201ENST00000309428 OR6C65A6NJZ3 312 aa11.46□□□□□ -0.57
RETREG3-201ENST00000309428 DCTN6O00399 190 aa11.46□□□□□ -0.57
RETREG3-201ENST00000309428 GAAP10253 952 aa11.46□□□□□ -0.57
RETREG3-201ENST00000309428 FOSL2P15408 326 aa11.46□□□□□ -0.57
RETREG3-201ENST00000309428 AMY2BP19961 511 aa11.46□□□□□ -0.57
RETREG3-201ENST00000309428 EEF1A1P68104 462 aaKnown RBP11.46□□□□□ -0.57
RETREG3-201ENST00000309428 AWAT2Q6E213 333 aa11.46□□□□□ -0.57
RETREG3-201ENST00000309428 EIF5AL1Q6IS14 154 aaKnown RBP11.46□□□□□ -0.57
RETREG3-201ENST00000309428 GABRG1Q8N1C3 465 aa11.46□□□□□ -0.57
RETREG3-201ENST00000309428 SLC41A2Q96JW4 573 aa11.46□□□□□ -0.57
RETREG3-201ENST00000309428 RSRP1Q9BUV0 290 aa11.46□□□□□ -0.57
RETREG3-201ENST00000309428 IFT22Q9H7X7 185 aa11.46□□□□□ -0.57
RETREG3-201ENST00000309428 ANKRD10Q9NXR5 420 aa11.46□□□□□ -0.57
RETREG3-201ENST00000309428 CSAG2Q9Y5P2 127 aa11.46□□□□□ -0.57
RETREG3-201ENST00000309428 A0A0D9SG52 128 aa11.46□□□□□ -0.58
RETREG3-201ENST00000309428 CYR61O00622 381 aa11.46□□□□□ -0.58
RETREG3-201ENST00000309428 BRINP1O60477 761 aa11.46□□□□□ -0.58
RETREG3-201ENST00000309428 SRPX2O60687 465 aaPredicted RBP11.46□□□□□ -0.58
RETREG3-201ENST00000309428 NDUFB6O95139 128 aa11.46□□□□□ -0.58
RETREG3-201ENST00000309428 H2BFMP0C1H6 154 aa11.46□□□□□ -0.58
RETREG3-201ENST00000309428 IL9P15248 144 aa11.46□□□□□ -0.58
RETREG3-201ENST00000309428 CNR1P21554 472 aa11.46□□□□□ -0.58
RETREG3-201ENST00000309428 TUBG1P23258 451 aa11.46□□□□□ -0.58
RETREG3-201ENST00000309428 NFYBP25208 207 aa11.46□□□□□ -0.58
RETREG3-201ENST00000309428 BLKP51451 505 aa11.46□□□□□ -0.58
RETREG3-201ENST00000309428 C2orf68Q2NKX9 166 aa11.46□□□□□ -0.58
RETREG3-201ENST00000309428 NEK7Q8TDX7 302 aa11.46□□□□□ -0.58
RETREG3-201ENST00000309428 ISOC2Q96AB3 205 aa11.46□□□□□ -0.58
RETREG3-201ENST00000309428 ACAD8Q9UKU7 415 aa11.46□□□□□ -0.58
RETREG3-201ENST00000309428 EMC9Q9Y3B6 208 aa11.46□□□□□ -0.58
RETREG3-201ENST00000309428 MASP2O00187 686 aa11.45□□□□□ -0.58
RETREG3-201ENST00000309428 MPZL1O95297 269 aa11.45□□□□□ -0.58
RETREG3-201ENST00000309428 DRD1P21728 446 aa11.45□□□□□ -0.58
RETREG3-201ENST00000309428 RBMXP38159 391 aaKnown RBP11.45□□□□□ -0.58
RETREG3-201ENST00000309428 TNFRSF4P43489 277 aa11.45□□□□□ -0.58
RETREG3-201ENST00000309428 EFNB2P52799 333 aa11.45□□□□□ -0.58
RETREG3-201ENST00000309428 RPS15P62841 145 aaKnown RBP11.45□□□□□ -0.58
RETREG3-201ENST00000309428 MRPS10P82664 201 aaKnown RBP11.45□□□□□ -0.58
RETREG3-201ENST00000309428 PHF19Q5T6S3 580 aa11.45□□□□□ -0.58
RETREG3-201ENST00000309428 KCTD18Q6PI47 426 aaPredicted RBP11.45□□□□□ -0.58
RETREG3-201ENST00000309428 NPSR1Q6W5P4 371 aa11.45□□□□□ -0.58
RETREG3-201ENST00000309428 CHRDL2Q6WN34 429 aa11.45□□□□□ -0.58
RETREG3-201ENST00000309428 SLC22A8Q8TCC7 542 aa11.45□□□□□ -0.58
RETREG3-201ENST00000309428 VSX1Q9NZR4 365 aaPredicted RBP11.45□□□□□ -0.58
RETREG3-201ENST00000309428 KCNG2Q9UJ96 466 aa11.45□□□□□ -0.58
RETREG3-201ENST00000309428 SERINC4A6NH21 518 aa11.45□□□□□ -0.58
RETREG3-201ENST00000309428 SDCBPO00560 298 aaPredicted RBP11.45□□□□□ -0.58
RETREG3-201ENST00000309428 ICOSLGO75144 302 aa11.45□□□□□ -0.58
RETREG3-201ENST00000309428 ALOX12BO75342 701 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms