RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 OR51A7Q8NH64 312 aa4.87□□□□□ -1.63
VPS50-202ENST00000305866 C1orf216Q8TAB5 229 aa4.87□□□□□ -1.63
VPS50-202ENST00000305866 ST7LQ8TDW4 575 aa4.87□□□□□ -1.63
VPS50-202ENST00000305866 RHBDD1Q8TEB9 315 aa4.87□□□□□ -1.63
VPS50-202ENST00000305866 MALSU1Q96EH3 234 aa4.87□□□□□ -1.63
VPS50-202ENST00000305866 TAAR9Q96RI9 348 aa4.87□□□□□ -1.63
VPS50-202ENST00000305866 LMF1Q96S06 567 aa4.87□□□□□ -1.63
VPS50-202ENST00000305866 SLC5A7Q9GZV3 580 aa4.87□□□□□ -1.63
VPS50-202ENST00000305866 DUSP15Q9H1R2 295 aaPredicted RBP4.87□□□□□ -1.63
VPS50-202ENST00000305866 MMP25Q9NPA2 562 aa4.87□□□□□ -1.63
VPS50-202ENST00000305866 CACFD1Q9UGQ2 172 aa4.87□□□□□ -1.63
VPS50-202ENST00000305866 SLC13A4Q9UKG4 626 aa4.87□□□□□ -1.63
VPS50-202ENST00000305866 ZDHHC8Q9ULC8 765 aa4.87□□□□□ -1.63
VPS50-202ENST00000305866 TMEM184BQ9Y519 407 aaPredicted RBP4.87□□□□□ -1.63
VPS50-202ENST00000305866 SPTBP11277 2137 aa4.87□□□□□ -1.63
VPS50-202ENST00000305866 TNRC6AQ8NDV7 1962 aaKnown RBP4.87□□□□□ -1.63
VPS50-202ENST00000305866 VPS13AQ96RL7 3174 aa4.86□□□□□ -1.63
VPS50-202ENST00000305866 OR5H14A6NHG9 310 aa4.86□□□□□ -1.63
VPS50-202ENST00000305866 C17orf51A8MQB3 221 aa4.86□□□□□ -1.63
VPS50-202ENST00000305866 SSNA1O43805 119 aa4.86□□□□□ -1.63
VPS50-202ENST00000305866 DKK1O94907 266 aa4.86□□□□□ -1.63
VPS50-202ENST00000305866 OR2F2O95006 317 aa4.86□□□□□ -1.63
VPS50-202ENST00000305866 PMS2P2O95744 297 aa4.86□□□□□ -1.63
VPS50-202ENST00000305866 TNFP01375 233 aa4.86□□□□□ -1.63
VPS50-202ENST00000305866 STARD6P59095 220 aa4.86□□□□□ -1.63
VPS50-202ENST00000305866 LGALS3BPQ08380 585 aa4.86□□□□□ -1.63
VPS50-202ENST00000305866 OR2F1Q13607 317 aa4.86□□□□□ -1.63
VPS50-202ENST00000305866 EXOSC7Q15024 291 aaKnown RBP4.86□□□□□ -1.63
VPS50-202ENST00000305866 PAN3Q58A45 887 aaKnown RBP4.86□□□□□ -1.63
VPS50-202ENST00000305866 AADACL3Q5VUY0 350 aa4.86□□□□□ -1.63
VPS50-202ENST00000305866 PARGQ86W56 976 aa4.86□□□□□ -1.63
VPS50-202ENST00000305866 PDZD9Q8IXQ8 264 aa4.86□□□□□ -1.63
VPS50-202ENST00000305866 COX18Q8N8Q8 333 aa4.86□□□□□ -1.63
VPS50-202ENST00000305866 RCBTB1Q8NDN9 531 aa4.86□□□□□ -1.63
VPS50-202ENST00000305866 OR10K1Q8NGX5 313 aa4.86□□□□□ -1.63
VPS50-202ENST00000305866 ZNF721Q8TF20 911 aa4.86□□□□□ -1.63
VPS50-202ENST00000305866 PTPMT1Q8WUK0 201 aaPredicted RBP4.86□□□□□ -1.63
VPS50-202ENST00000305866 ASB17Q8WXJ9 295 aa4.86□□□□□ -1.63
VPS50-202ENST00000305866 NKX3-1Q99801 234 aaPredicted RBP4.86□□□□□ -1.63
VPS50-202ENST00000305866 RTBDNQ9BSG5 229 aaPredicted RBP4.86□□□□□ -1.63
VPS50-202ENST00000305866 SEC11CQ9BY50 192 aa4.86□□□□□ -1.63
VPS50-202ENST00000305866 HIPK2Q9H2X6 1198 aa4.86□□□□□ -1.63
VPS50-202ENST00000305866 PCDHB16Q9NRJ7 776 aa4.86□□□□□ -1.63
VPS50-202ENST00000305866 H2AFY2Q9P0M6 372 aaPredicted RBP4.86□□□□□ -1.63
VPS50-202ENST00000305866 CDC40O60508 579 aaKnown RBP eCLIP4.86□□□□□ -1.63
VPS50-202ENST00000305866 EIF1BO60739 113 aaKnown RBP4.86□□□□□ -1.63
VPS50-202ENST00000305866 SERPINI2O75830 405 aa4.86□□□□□ -1.63
VPS50-202ENST00000305866 DDAH2O95865 285 aa4.86□□□□□ -1.63
VPS50-202ENST00000305866 OR8U8P0C7N1 319 aa4.86□□□□□ -1.63
VPS50-202ENST00000305866 GABRG2P18507 467 aa4.86□□□□□ -1.63
VPS50-202ENST00000305866 RAB6AP20340 208 aa4.86□□□□□ -1.63
VPS50-202ENST00000305866 AKT2P31751 481 aa4.86□□□□□ -1.63
VPS50-202ENST00000305866 NAA10P41227 235 aaPredicted RBP4.86□□□□□ -1.63
VPS50-202ENST00000305866 EIF1P41567 113 aaKnown RBP4.86□□□□□ -1.63
VPS50-202ENST00000305866 MEOX2P50222 304 aa4.86□□□□□ -1.63
VPS50-202ENST00000305866 ARHGDIBP52566 201 aa4.86□□□□□ -1.63
VPS50-202ENST00000305866 INSM1Q01101 510 aaPredicted RBP4.86□□□□□ -1.63
VPS50-202ENST00000305866 TMEM69Q5SWH9 247 aa4.86□□□□□ -1.63
VPS50-202ENST00000305866 HOGA1Q86XE5 327 aa4.86□□□□□ -1.63
VPS50-202ENST00000305866 TMEFF1Q8IYR6 380 aa4.86□□□□□ -1.63
VPS50-202ENST00000305866 C12orf76Q8N812 135 aaPredicted RBP4.86□□□□□ -1.63
VPS50-202ENST00000305866 ZNF511Q8NB15 262 aa4.86□□□□□ -1.63
VPS50-202ENST00000305866 OR10S1Q8NGN2 331 aa4.86□□□□□ -1.63
VPS50-202ENST00000305866 PIGKQ92643 395 aa4.86□□□□□ -1.63
VPS50-202ENST00000305866 DVL3Q92997 716 aaPredicted RBP4.86□□□□□ -1.63
VPS50-202ENST00000305866 SLC46A1Q96NT5 459 aa4.86□□□□□ -1.63
VPS50-202ENST00000305866 ALG12Q9BV10 488 aa4.86□□□□□ -1.63
VPS50-202ENST00000305866 OR51V1Q9H2C8 321 aa4.86□□□□□ -1.63
VPS50-202ENST00000305866 CLEC4MQ9H2X3 399 aaPredicted RBP4.86□□□□□ -1.63
VPS50-202ENST00000305866 GSN-AS1Q9NRJ2 163 aa4.86□□□□□ -1.63
VPS50-202ENST00000305866 PRODH2Q9UF12 536 aa4.86□□□□□ -1.63
VPS50-202ENST00000305866 STARD10Q9Y365 291 aa4.86□□□□□ -1.63
VPS50-202ENST00000305866 BSNQ9UPA5 3926 aa4.86□□□□□ -1.63
VPS50-202ENST00000305866 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.86□□□□□ -1.63
VPS50-202ENST00000305866 LOC102725191A0A1B0GVB3 256 aa4.86□□□□□ -1.63
VPS50-202ENST00000305866 C9orf170A2RU37 121 aa4.86□□□□□ -1.63
VPS50-202ENST00000305866 TMEM212A6NML5 194 aa4.86□□□□□ -1.63
VPS50-202ENST00000305866 FTCDNL1E5RQL4 147 aa4.86□□□□□ -1.63
VPS50-202ENST00000305866 CRYBA1P05813 215 aa4.86□□□□□ -1.63
VPS50-202ENST00000305866 CSF1P09603 554 aa4.86□□□□□ -1.63
VPS50-202ENST00000305866 RNH1P13489 461 aaKnown RBP4.86□□□□□ -1.63
VPS50-202ENST00000305866 ST6GAL1P15907 406 aa4.86□□□□□ -1.63
VPS50-202ENST00000305866 GABRA3P34903 492 aa4.86□□□□□ -1.63
VPS50-202ENST00000305866 CAPZBP47756 277 aa4.86□□□□□ -1.63
VPS50-202ENST00000305866 CSNK1EP49674 416 aaKnown RBP4.86□□□□□ -1.63
VPS50-202ENST00000305866 ALG10BQ5I7T1 473 aa4.86□□□□□ -1.63
VPS50-202ENST00000305866 GLT8D1Q68CQ7 371 aa4.86□□□□□ -1.63
VPS50-202ENST00000305866 DEGS2Q6QHC5 323 aa4.86□□□□□ -1.63
VPS50-202ENST00000305866 CBLN3Q6UW01 205 aa4.86□□□□□ -1.63
VPS50-202ENST00000305866 RBMS3Q6XE24 437 aaKnown RBP4.86□□□□□ -1.63
VPS50-202ENST00000305866 ETV3LQ6ZN32 361 aa4.86□□□□□ -1.63
VPS50-202ENST00000305866 ZNF574Q6ZN55 896 aaPredicted RBP4.86□□□□□ -1.63
VPS50-202ENST00000305866 SFTPA2Q8IWL1 248 aa4.86□□□□□ -1.63
VPS50-202ENST00000305866 PNLDC1Q8NA58 520 aaKnown RBP4.86□□□□□ -1.63
VPS50-202ENST00000305866 OR51A2Q8NGJ7 313 aa4.86□□□□□ -1.63
VPS50-202ENST00000305866 OR4C3Q8NH37 302 aa4.86□□□□□ -1.63
VPS50-202ENST00000305866 NUBPLQ8TB37 319 aa4.86□□□□□ -1.63
VPS50-202ENST00000305866 ROBO4Q8WZ75 1007 aa4.86□□□□□ -1.63
VPS50-202ENST00000305866 DCBLD2Q96PD2 775 aa4.86□□□□□ -1.63
VPS50-202ENST00000305866 OR5B2Q96R09 309 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms