RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 OR11A1Q9GZK7 315 aa12.13□□□□□ -0.47
CTDP1-202ENST00000299543 MBD2Q9UBB5 411 aa12.13□□□□□ -0.47
CTDP1-202ENST00000299543 UBE2QL1A1L167 161 aa12.13□□□□□ -0.47
CTDP1-202ENST00000299543 STMND1H3BQB6 276 aa12.13□□□□□ -0.47
CTDP1-202ENST00000299543 EIF1AYO14602 144 aaKnown RBP12.13□□□□□ -0.47
CTDP1-202ENST00000299543 ST8SIA5O15466 376 aa12.13□□□□□ -0.47
CTDP1-202ENST00000299543 RAB40ALP0C0E4 278 aa12.13□□□□□ -0.47
CTDP1-202ENST00000299543 ZNF35P13682 527 aa12.13□□□□□ -0.47
CTDP1-202ENST00000299543 NSDHLQ15738 373 aa12.13□□□□□ -0.47
CTDP1-202ENST00000299543 FAM122BQ7Z309 247 aa12.13□□□□□ -0.47
CTDP1-202ENST00000299543 KRT77Q7Z794 578 aa12.13□□□□□ -0.47
CTDP1-202ENST00000299543 TMEM17Q86X19 198 aa12.13□□□□□ -0.47
CTDP1-202ENST00000299543 RAB40AQ8WXH6 277 aa12.13□□□□□ -0.47
CTDP1-202ENST00000299543 ZNF75AQ96N20 296 aa12.13□□□□□ -0.47
CTDP1-202ENST00000299543 PTDSS2Q9BVG9 487 aa12.13□□□□□ -0.47
CTDP1-202ENST00000299543 PCDH15Q96QU1 1955 aa12.13□□□□□ -0.47
CTDP1-202ENST00000299543 MPTX1A8MV57 137 aa12.13□□□□□ -0.47
CTDP1-202ENST00000299543 SOX1O00570 391 aaPredicted RBP12.13□□□□□ -0.47
CTDP1-202ENST00000299543 GOSR2O14653 212 aa12.13□□□□□ -0.47
CTDP1-202ENST00000299543 KCNAB3O43448 404 aa12.13□□□□□ -0.47
CTDP1-202ENST00000299543 LIPCP11150 499 aa12.13□□□□□ -0.47
CTDP1-202ENST00000299543 RPS4XP62701 263 aaKnown RBP12.13□□□□□ -0.47
CTDP1-202ENST00000299543 SKP2Q13309 424 aa12.13□□□□□ -0.47
CTDP1-202ENST00000299543 SNTB1Q13884 538 aaKnown RBP12.13□□□□□ -0.47
CTDP1-202ENST00000299543 WDR38Q5JTN6 314 aa12.13□□□□□ -0.47
CTDP1-202ENST00000299543 OR10K2Q6IF99 312 aa12.13□□□□□ -0.47
CTDP1-202ENST00000299543 SEZ6L2Q6UXD5 910 aa12.13□□□□□ -0.47
CTDP1-202ENST00000299543 OR51S1Q8NGJ8 323 aa12.13□□□□□ -0.47
CTDP1-202ENST00000299543 PTPMT1Q8WUK0 201 aaPredicted RBP12.13□□□□□ -0.47
CTDP1-202ENST00000299543 WDR13Q9H1Z4 485 aa12.13□□□□□ -0.47
CTDP1-202ENST00000299543 MMP17Q9ULZ9 603 aa12.13□□□□□ -0.47
CTDP1-202ENST00000299543 ANKRD20A5PA0PJZ0 165 aa12.12□□□□□ -0.47
CTDP1-202ENST00000299543 PQLC2LA1A4F0 135 aa12.12□□□□□ -0.47
CTDP1-202ENST00000299543 CTDSPLO15194 276 aa12.12□□□□□ -0.47
CTDP1-202ENST00000299543 MPZL1O95297 269 aa12.12□□□□□ -0.47
CTDP1-202ENST00000299543 RORAP35398 523 aa12.12□□□□□ -0.47
CTDP1-202ENST00000299543 RFC3P40938 356 aa12.12□□□□□ -0.47
CTDP1-202ENST00000299543 MNDAP41218 407 aa12.12□□□□□ -0.47
CTDP1-202ENST00000299543 EIF1AXP47813 144 aaKnown RBP12.12□□□□□ -0.47
CTDP1-202ENST00000299543 HSD17B7P56937 341 aa12.12□□□□□ -0.47
CTDP1-202ENST00000299543 ZNF117Q03924 483 aa12.12□□□□□ -0.47
CTDP1-202ENST00000299543 ARHGAP40Q5TG30 622 aa12.12□□□□□ -0.47
CTDP1-202ENST00000299543 ZNF440Q8IYI8 595 aa12.12□□□□□ -0.47
CTDP1-202ENST00000299543 OR4C16Q8NGL9 310 aa12.12□□□□□ -0.47
CTDP1-202ENST00000299543 GLYATL2Q8WU03 294 aa12.12□□□□□ -0.47
CTDP1-202ENST00000299543 RSRP1Q9BUV0 290 aa12.12□□□□□ -0.47
CTDP1-202ENST00000299543 CGGBP1Q9UFW8 167 aaPredicted RBP12.12□□□□□ -0.47
CTDP1-202ENST00000299543 FBXL3Q9UKT7 428 aa12.12□□□□□ -0.47
CTDP1-202ENST00000299543 MOKQ9UQ07 419 aa12.12□□□□□ -0.47
CTDP1-202ENST00000299543 FARSAQ9Y285 508 aaKnown RBP12.12□□□□□ -0.47
CTDP1-202ENST00000299543 PCNX3Q9H6A9 2034 aa12.12□□□□□ -0.47
CTDP1-202ENST00000299543 OR4C45A6NMZ5 311 aa12.12□□□□□ -0.47
CTDP1-202ENST00000299543 HTR3BO95264 441 aa12.12□□□□□ -0.47
CTDP1-202ENST00000299543 ALOX5APP20292 161 aa12.12□□□□□ -0.47
CTDP1-202ENST00000299543 PPT1P50897 306 aa12.12□□□□□ -0.47
CTDP1-202ENST00000299543 H2BFSP57053 126 aa12.12□□□□□ -0.47
CTDP1-202ENST00000299543 ADAM8P78325 824 aa12.12□□□□□ -0.47
CTDP1-202ENST00000299543 AVPI1Q5T686 147 aa12.12□□□□□ -0.47
CTDP1-202ENST00000299543 H3F3CQ6NXT2 135 aa12.12□□□□□ -0.47
CTDP1-202ENST00000299543 GLDNQ6ZMI3 551 aaPredicted RBP12.12□□□□□ -0.47
CTDP1-202ENST00000299543 SLC43A2Q8N370 569 aa12.12□□□□□ -0.47
CTDP1-202ENST00000299543 JAGN1Q8N5M9 183 aa12.12□□□□□ -0.47
CTDP1-202ENST00000299543 PHYHIPQ92561 330 aa12.12□□□□□ -0.47
CTDP1-202ENST00000299543 LRFN5Q96NI6 719 aa12.12□□□□□ -0.47
CTDP1-202ENST00000299543 TGIF2Q9GZN2 237 aa12.12□□□□□ -0.47
CTDP1-202ENST00000299543 CHRDQ9H2X0 955 aa12.12□□□□□ -0.47
CTDP1-202ENST00000299543 EXO5Q9H790 373 aa12.12□□□□□ -0.47
CTDP1-202ENST00000299543 NPTNQ9Y639 398 aa12.12□□□□□ -0.47
CTDP1-202ENST00000299543 IGHV3-20A0A0C4DH32 117 aa12.12□□□□□ -0.47
CTDP1-202ENST00000299543 MEX3AA1L020 520 aaKnown RBP12.12□□□□□ -0.47
CTDP1-202ENST00000299543 AGPAT2O15120 278 aa12.12□□□□□ -0.47
CTDP1-202ENST00000299543 TGM6O95932 706 aa12.12□□□□□ -0.47
CTDP1-202ENST00000299543 Q3ZCU0 254 aa12.12□□□□□ -0.47
CTDP1-202ENST00000299543 PRSS35Q8N3Z0 413 aa12.12□□□□□ -0.47
CTDP1-202ENST00000299543 OR5M9Q8NGP3 310 aa12.12□□□□□ -0.47
CTDP1-202ENST00000299543 RNF166Q96A37 237 aaPredicted RBP12.12□□□□□ -0.47
CTDP1-202ENST00000299543 S1PR5Q9H228 398 aa12.12□□□□□ -0.47
CTDP1-202ENST00000299543 CENPMQ9NSP4 180 aa12.12□□□□□ -0.47
CTDP1-202ENST00000299543 NAP1L6A6NFF2 107 aa12.11□□□□□ -0.47
CTDP1-202ENST00000299543 OR6C76A6NM76 312 aa12.11□□□□□ -0.47
CTDP1-202ENST00000299543 ZNF749O43361 778 aa12.11□□□□□ -0.47
CTDP1-202ENST00000299543 PRAF2O60831 178 aa12.11□□□□□ -0.47
CTDP1-202ENST00000299543 OPN1LWP04000 364 aa12.11□□□□□ -0.47
CTDP1-202ENST00000299543 CD63P08962 238 aa12.11□□□□□ -0.47
CTDP1-202ENST00000299543 CSF2RBP32927 897 aa12.11□□□□□ -0.47
CTDP1-202ENST00000299543 LUMP51884 338 aaPredicted RBP12.11□□□□□ -0.47
CTDP1-202ENST00000299543 RAG2P55895 527 aa12.11□□□□□ -0.47
CTDP1-202ENST00000299543 SLC37A1P57057 533 aa12.11□□□□□ -0.47
CTDP1-202ENST00000299543 PLCXD2Q0VAA5 305 aa12.11□□□□□ -0.47
CTDP1-202ENST00000299543 IL10RAQ13651 578 aa12.11□□□□□ -0.47
CTDP1-202ENST00000299543 ACKR1Q16570 336 aa12.11□□□□□ -0.47
CTDP1-202ENST00000299543 C2orf76Q3KRA6 126 aa12.11□□□□□ -0.47
CTDP1-202ENST00000299543 NDUFAF7Q7L592 441 aa12.11□□□□□ -0.47
CTDP1-202ENST00000299543 CDC20BQ86Y33 519 aa12.11□□□□□ -0.47
CTDP1-202ENST00000299543 ZNF417Q8TAU3 575 aa12.11□□□□□ -0.47
CTDP1-202ENST00000299543 GPR119Q8TDV5 335 aa12.11□□□□□ -0.47
CTDP1-202ENST00000299543 LCORQ96JN0 433 aaPredicted RBP12.11□□□□□ -0.47
CTDP1-202ENST00000299543 CHST6Q9GZX3 395 aa12.11□□□□□ -0.47
CTDP1-202ENST00000299543 STEAP1Q9UHE8 339 aa12.11□□□□□ -0.47
CTDP1-202ENST00000299543 EML5Q05BV3 1969 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms