RNA–Protein interactions for RNA: ENST00000299162.9

FOXN4-201, Transcript of forkhead box N4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXN4, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-201ENST00000299162 RBMS3Q6XE24 437 aaKnown RBP9.1□□□□□ -0.95
FOXN4-201ENST00000299162 POMGNT2Q8NAT1 580 aa9.1□□□□□ -0.95
FOXN4-201ENST00000299162 CADM4Q8NFZ8 388 aa9.1□□□□□ -0.95
FOXN4-201ENST00000299162 OR1N1Q8NGS0 311 aa9.1□□□□□ -0.95
FOXN4-201ENST00000299162 TNFAIP8L1Q8WVP5 186 aa9.1□□□□□ -0.95
FOXN4-201ENST00000299162 SHDQ96IW2 340 aa9.1□□□□□ -0.95
FOXN4-201ENST00000299162 ZMAT3Q9HA38 289 aaKnown RBP9.1□□□□□ -0.95
FOXN4-201ENST00000299162 ELOVL3Q9HB03 270 aa9.1□□□□□ -0.95
FOXN4-201ENST00000299162 CYSLTR2Q9NS75 346 aa9.1□□□□□ -0.95
FOXN4-201ENST00000299162 ANKRD10Q9NXR5 420 aa9.1□□□□□ -0.95
FOXN4-201ENST00000299162 CUL9Q8IWT3 2517 aa9.09□□□□□ -0.95
FOXN4-201ENST00000299162 F10P00742 488 aa9.09□□□□□ -0.95
FOXN4-201ENST00000299162 ANXA2P07355 339 aaKnown RBP9.09□□□□□ -0.95
FOXN4-201ENST00000299162 NMBP08949 121 aa9.09□□□□□ -0.95
FOXN4-201ENST00000299162 CTLA4P16410 223 aa9.09□□□□□ -0.95
FOXN4-201ENST00000299162 PGCP20142 388 aa9.09□□□□□ -0.95
FOXN4-201ENST00000299162 ACHEP22303 614 aa9.09□□□□□ -0.95
FOXN4-201ENST00000299162 RNF4P78317 190 aa9.09□□□□□ -0.95
FOXN4-201ENST00000299162 ACSM1Q08AH1 577 aa9.09□□□□□ -0.95
FOXN4-201ENST00000299162 GFOD2Q3B7J2 385 aa9.09□□□□□ -0.95
FOXN4-201ENST00000299162 RPL22L1Q6P5R6 122 aaKnown RBP9.09□□□□□ -0.95
FOXN4-201ENST00000299162 CMIPQ8IY22 773 aa9.09□□□□□ -0.95
FOXN4-201ENST00000299162 CMTM4Q8IZR5 234 aa9.09□□□□□ -0.95
FOXN4-201ENST00000299162 RGP1Q92546 391 aaPredicted RBP9.09□□□□□ -0.95
FOXN4-201ENST00000299162 ZNF775Q96BV0 537 aaPredicted RBP9.09□□□□□ -0.95
FOXN4-201ENST00000299162 KCTD12Q96CX2 325 aaKnown RBP9.09□□□□□ -0.95
FOXN4-201ENST00000299162 CPNE2Q96FN4 548 aaPredicted RBP9.09□□□□□ -0.95
FOXN4-201ENST00000299162 CRB3Q9BUF7 120 aa9.09□□□□□ -0.95
FOXN4-201ENST00000299162 PAPOLGQ9BWT3 736 aaKnown RBP9.09□□□□□ -0.95
FOXN4-201ENST00000299162 NIT2Q9NQR4 276 aa9.09□□□□□ -0.95
FOXN4-201ENST00000299162 INPP5EQ9NRR6 644 aa9.09□□□□□ -0.95
FOXN4-201ENST00000299162 FRRS1LQ9P0K9 344 aa9.09□□□□□ -0.95
FOXN4-201ENST00000299162 LHX6Q9UPM6 363 aa9.09□□□□□ -0.95
FOXN4-201ENST00000299162 EML5Q05BV3 1969 aa9.09□□□□□ -0.95
FOXN4-201ENST00000299162 MEIKINA0A087WXM9 373 aa9.09□□□□□ -0.95
FOXN4-201ENST00000299162 A0A1W2PQM1 296 aa9.09□□□□□ -0.95
FOXN4-201ENST00000299162 AHSA1O95433 338 aa9.09□□□□□ -0.95
FOXN4-201ENST00000299162 LY86O95711 162 aa9.09□□□□□ -0.95
FOXN4-201ENST00000299162 CLDN6P56747 220 aa9.09□□□□□ -0.95
FOXN4-201ENST00000299162 POU3F1Q03052 451 aaPredicted RBP9.09□□□□□ -0.95
FOXN4-201ENST00000299162 LYSMD4Q5XG99 296 aa9.09□□□□□ -0.95
FOXN4-201ENST00000299162 HAGHLQ6PII5 290 aaPredicted RBP9.09□□□□□ -0.95
FOXN4-201ENST00000299162 PDZD9Q8IXQ8 264 aa9.09□□□□□ -0.95
FOXN4-201ENST00000299162 D2HGDHQ8N465 521 aa9.09□□□□□ -0.95
FOXN4-201ENST00000299162 PLPP7Q8NBV4 271 aa9.09□□□□□ -0.95
FOXN4-201ENST00000299162 TMEM68Q96MH6 324 aa9.09□□□□□ -0.95
FOXN4-201ENST00000299162 INTS14Q96SY0 518 aa9.09□□□□□ -0.95
FOXN4-201ENST00000299162 WDR77Q9BQA1 342 aaPredicted RBP9.09□□□□□ -0.95
FOXN4-201ENST00000299162 PELOQ9BRX2 385 aaKnown RBP9.09□□□□□ -0.95
FOXN4-201ENST00000299162 EVA1AQ9H8M9 152 aa9.09□□□□□ -0.95
FOXN4-201ENST00000299162 OCIAD1Q9NX40 245 aa9.09□□□□□ -0.95
FOXN4-201ENST00000299162 HIF3AQ9Y2N7 669 aa9.09□□□□□ -0.95
FOXN4-201ENST00000299162 COA3Q9Y2R0 106 aaPredicted RBP9.09□□□□□ -0.95
FOXN4-201ENST00000299162 NPFFR2Q9Y5X5 522 aa9.09□□□□□ -0.95
FOXN4-201ENST00000299162 TRAV8-7A0A075B6U6 113 aa9.09□□□□□ -0.95
FOXN4-201ENST00000299162 A0A1W2PNR3 127 aa9.09□□□□□ -0.95
FOXN4-201ENST00000299162 ZNF879B4DU55 563 aa9.09□□□□□ -0.95
FOXN4-201ENST00000299162 DISC1C4P0D8 188 aa9.09□□□□□ -0.95
FOXN4-201ENST00000299162 HTR3BO95264 441 aa9.09□□□□□ -0.95
FOXN4-201ENST00000299162 SERPINA3P01011 423 aa9.09□□□□□ -0.95
FOXN4-201ENST00000299162 GIMD1P0DJR0 217 aa9.09□□□□□ -0.95
FOXN4-201ENST00000299162 ACY1Q03154 408 aa9.09□□□□□ -0.95
FOXN4-201ENST00000299162 C1orf140Q5VVS0 124 aa9.09□□□□□ -0.95
FOXN4-201ENST00000299162 OGFOD3Q6PK18 319 aa9.09□□□□□ -0.95
FOXN4-201ENST00000299162 NDUFAF7Q7L592 441 aa9.09□□□□□ -0.95
FOXN4-201ENST00000299162 CBLN2Q8IUK8 224 aa9.09□□□□□ -0.95
FOXN4-201ENST00000299162 ZNF440Q8IYI8 595 aa9.09□□□□□ -0.95
FOXN4-201ENST00000299162 TSNAXQ99598 290 aaKnown RBP9.09□□□□□ -0.95
FOXN4-201ENST00000299162 CDX2Q99626 313 aaPredicted RBP9.09□□□□□ -0.95
FOXN4-201ENST00000299162 GAREM1Q9H706 876 aa9.09□□□□□ -0.95
FOXN4-201ENST00000299162 SEC61A2Q9H9S3 476 aa9.09□□□□□ -0.95
FOXN4-201ENST00000299162 TAS2R5Q9NYW4 299 aa9.09□□□□□ -0.95
FOXN4-201ENST00000299162 FBXL3Q9UKT7 428 aa9.09□□□□□ -0.95
FOXN4-201ENST00000299162 ZNF281Q9Y2X9 895 aa9.09□□□□□ -0.95
FOXN4-201ENST00000299162 MMACHCQ9Y4U1 282 aa9.09□□□□□ -0.95
FOXN4-201ENST00000299162 OR2J2O76002 312 aa9.08□□□□□ -0.96
FOXN4-201ENST00000299162 WDPCPO95876 746 aa9.08□□□□□ -0.96
FOXN4-201ENST00000299162 HLA-DQB1P01920 261 aa9.08□□□□□ -0.96
FOXN4-201ENST00000299162 ASAH2BP0C7U1 165 aa9.08□□□□□ -0.96
FOXN4-201ENST00000299162 EMP2P54851 167 aa9.08□□□□□ -0.96
FOXN4-201ENST00000299162 BDH1Q02338 343 aa9.08□□□□□ -0.96
FOXN4-201ENST00000299162 CBFBQ13951 182 aa9.08□□□□□ -0.96
FOXN4-201ENST00000299162 SLC36A2Q495M3 483 aa9.08□□□□□ -0.96
FOXN4-201ENST00000299162 FAM122BQ7Z309 247 aa9.08□□□□□ -0.96
FOXN4-201ENST00000299162 TMED4Q7Z7H5 227 aa9.08□□□□□ -0.96
FOXN4-201ENST00000299162 SLITRK4Q8IW52 837 aa9.08□□□□□ -0.96
FOXN4-201ENST00000299162 SYNPRQ8TBG9 265 aa9.08□□□□□ -0.96
FOXN4-201ENST00000299162 HOXB13Q92826 284 aaPredicted RBP9.08□□□□□ -0.96
FOXN4-201ENST00000299162 CMTM3Q96MX0 182 aa9.08□□□□□ -0.96
FOXN4-201ENST00000299162 ZNF285Q96NJ3 590 aa9.08□□□□□ -0.96
FOXN4-201ENST00000299162 DMRTA2Q96SC8 542 aa9.08□□□□□ -0.96
FOXN4-201ENST00000299162 METTL7AQ9H8H3 244 aa9.08□□□□□ -0.96
FOXN4-201ENST00000299162 BDP1A6H8Y1 2624 aa9.08□□□□□ -0.96
FOXN4-201ENST00000299162 IGKV3D-11A0A0A0MRZ8 115 aa9.08□□□□□ -0.96
FOXN4-201ENST00000299162 A0A1B0GWJ7 208 aa9.08□□□□□ -0.96
FOXN4-201ENST00000299162 DCDC2BA2VCK2 349 aa9.08□□□□□ -0.96
FOXN4-201ENST00000299162 GPR31O00270 319 aa9.08□□□□□ -0.96
FOXN4-201ENST00000299162 GOSR2O14653 212 aa9.08□□□□□ -0.96
FOXN4-201ENST00000299162 ARPC3O15145 178 aa9.08□□□□□ -0.96
FOXN4-201ENST00000299162 SEC14L5O43304 696 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms