RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 ARG2P78540 354 aa13.82□□□□□ -0.2
LSM6-201ENST00000296581 ROM1Q03395 351 aa13.82□□□□□ -0.2
LSM6-201ENST00000296581 MEP1BQ16820 701 aa13.82□□□□□ -0.2
LSM6-201ENST00000296581 LIPNQ5VXI9 398 aa13.82□□□□□ -0.2
LSM6-201ENST00000296581 SLC25A47Q6Q0C1 308 aa13.82□□□□□ -0.2
LSM6-201ENST00000296581 IGFL2Q6UWQ7 119 aa13.82□□□□□ -0.2
LSM6-201ENST00000296581 GLB1L2Q8IW92 636 aa13.82□□□□□ -0.2
LSM6-201ENST00000296581 YIPF7Q8N8F6 280 aa13.82□□□□□ -0.2
LSM6-201ENST00000296581 OR8B4Q96RC9 309 aa13.82□□□□□ -0.2
LSM6-201ENST00000296581 COQ3Q9NZJ6 369 aa13.82□□□□□ -0.2
LSM6-201ENST00000296581 TRBV2A0A0J9YWF9 115 aa13.81□□□□□ -0.2
LSM6-201ENST00000296581 FAM166BA8MTA8 275 aa13.81□□□□□ -0.2
LSM6-201ENST00000296581 DVL2O14641 736 aa13.81□□□□□ -0.2
LSM6-201ENST00000296581 NDUFA2O43678 99 aa13.81□□□□□ -0.2
LSM6-201ENST00000296581 GPRIN2O60269 458 aa13.81□□□□□ -0.2
LSM6-201ENST00000296581 CLEC2LP0C7M8 214 aa13.81□□□□□ -0.2
LSM6-201ENST00000296581 CLVS2Q5SYC1 327 aa13.81□□□□□ -0.2
LSM6-201ENST00000296581 OTPQ5XKR4 325 aa13.81□□□□□ -0.2
LSM6-201ENST00000296581 NEIL3Q8TAT5 605 aa13.81□□□□□ -0.2
LSM6-201ENST00000296581 SLCO1C1Q9NYB5 712 aa13.81□□□□□ -0.2
LSM6-201ENST00000296581 SHISA3A0PJX4 238 aa13.81□□□□□ -0.2
LSM6-201ENST00000296581 NPIPA2E9PIF3 369 aa13.81□□□□□ -0.2
LSM6-201ENST00000296581 NPIPA3F8WFD2 350 aa13.81□□□□□ -0.2
LSM6-201ENST00000296581 TLX3O43711 291 aaPredicted RBP13.81□□□□□ -0.2
LSM6-201ENST00000296581 CXCL13O43927 109 aa13.81□□□□□ -0.2
LSM6-201ENST00000296581 AQP8O94778 261 aa13.81□□□□□ -0.2
LSM6-201ENST00000296581 IL7P13232 177 aa13.81□□□□□ -0.2
LSM6-201ENST00000296581 ZNF823P16415 610 aa13.81□□□□□ -0.2
LSM6-201ENST00000296581 MAGEA5P43359 124 aa13.81□□□□□ -0.2
LSM6-201ENST00000296581 CCL11P51671 97 aa13.81□□□□□ -0.2
LSM6-201ENST00000296581 DEFA1P59665 94 aa13.81□□□□□ -0.2
LSM6-201ENST00000296581 DEFA3P59666 94 aa13.81□□□□□ -0.2
LSM6-201ENST00000296581 NANOS3P60323 173 aaKnown RBP13.81□□□□□ -0.2
LSM6-201ENST00000296581 PLGLB1Q02325 96 aa13.81□□□□□ -0.2
LSM6-201ENST00000296581 MXD1Q05195 221 aa13.81□□□□□ -0.2
LSM6-201ENST00000296581 ZNF766Q5HY98 468 aa13.81□□□□□ -0.2
LSM6-201ENST00000296581 LRRC69Q6ZNQ3 347 aa13.81□□□□□ -0.2
LSM6-201ENST00000296581 FDCSPQ8NFU4 85 aa13.81□□□□□ -0.2
LSM6-201ENST00000296581 OR10D3Q8NH80 312 aa13.81□□□□□ -0.2
LSM6-201ENST00000296581 NSMAFQ92636 917 aa13.81□□□□□ -0.2
LSM6-201ENST00000296581 C6orf62Q9GZU0 229 aaPredicted RBP13.81□□□□□ -0.2
LSM6-201ENST00000296581 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.81□□□□□ -0.2
LSM6-201ENST00000296581 IKZF2Q9UKS7 526 aa13.81□□□□□ -0.2
LSM6-201ENST00000296581 PTPRZ1P23471 2315 aaPredicted RBP13.81□□□□□ -0.2
LSM6-201ENST00000296581 SERPINA3P01011 423 aa13.8□□□□□ -0.2
LSM6-201ENST00000296581 NR2C1P13056 603 aa13.8□□□□□ -0.2
LSM6-201ENST00000296581 LAP3P28838 519 aa13.8□□□□□ -0.2
LSM6-201ENST00000296581 TALDO1P37837 337 aa13.8□□□□□ -0.2
LSM6-201ENST00000296581 LHX2P50458 406 aa13.8□□□□□ -0.2
LSM6-201ENST00000296581 TNFSF10P50591 281 aa13.8□□□□□ -0.2
LSM6-201ENST00000296581 ZNF133P52736 654 aaPredicted RBP13.8□□□□□ -0.2
LSM6-201ENST00000296581 RPS11P62280 158 aaKnown RBP eCLIP13.8□□□□□ -0.2
LSM6-201ENST00000296581 ABLIM2Q6H8Q1 611 aa13.8□□□□□ -0.2
LSM6-201ENST00000296581 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.8□□□□□ -0.2
LSM6-201ENST00000296581 ZIC4Q8N9L1 334 aa13.8□□□□□ -0.2
LSM6-201ENST00000296581 TEX19Q8NA77 164 aa13.8□□□□□ -0.2
LSM6-201ENST00000296581 TMEM178AQ8NBL3 297 aa13.8□□□□□ -0.2
LSM6-201ENST00000296581 GALNT11Q8NCW6 608 aa13.8□□□□□ -0.2
LSM6-201ENST00000296581 TMEM54Q969K7 222 aa13.8□□□□□ -0.2
LSM6-201ENST00000296581 MCHR2Q969V1 340 aa13.8□□□□□ -0.2
LSM6-201ENST00000296581 ZNF385AQ96PM9 386 aaKnown RBP13.8□□□□□ -0.2
LSM6-201ENST00000296581 OR2M2Q96R28 347 aa13.8□□□□□ -0.2
LSM6-201ENST00000296581 ABHD6Q9BV23 337 aa13.8□□□□□ -0.2
LSM6-201ENST00000296581 EIF3KQ9UBQ5 218 aaKnown RBP13.8□□□□□ -0.2
LSM6-201ENST00000296581 PEX16Q9Y5Y5 336 aa13.8□□□□□ -0.2
LSM6-201ENST00000296581 IQCMA0A1B0GVH7 501 aa13.8□□□□□ -0.2
LSM6-201ENST00000296581 MTNR1BP49286 362 aa13.8□□□□□ -0.2
LSM6-201ENST00000296581 EIF2B1Q14232 305 aaKnown RBP13.8□□□□□ -0.2
LSM6-201ENST00000296581 ACSM3Q53FZ2 586 aa13.8□□□□□ -0.2
LSM6-201ENST00000296581 PDSS1Q5T2R2 415 aa13.8□□□□□ -0.2
LSM6-201ENST00000296581 CARD17Q5XLA6 110 aa13.8□□□□□ -0.2
LSM6-201ENST00000296581 FDX2Q6P4F2 183 aa13.8□□□□□ -0.2
LSM6-201ENST00000296581 KCTD18Q6PI47 426 aaPredicted RBP13.8□□□□□ -0.2
LSM6-201ENST00000296581 TRILQ7L0X0 811 aa13.8□□□□□ -0.2
LSM6-201ENST00000296581 ZNF679Q8IYX0 411 aa13.8□□□□□ -0.2
LSM6-201ENST00000296581 TMEM123Q8N131 208 aa13.8□□□□□ -0.2
LSM6-201ENST00000296581 C11orf40Q8WZ69 217 aa13.8□□□□□ -0.2
LSM6-201ENST00000296581 HSD17B8Q92506 261 aa13.8□□□□□ -0.2
LSM6-201ENST00000296581 NOSIPQ9Y314 301 aaKnown RBP13.8□□□□□ -0.2
LSM6-201ENST00000296581 ZNF716A6NP11 495 aa13.79□□□□□ -0.2
LSM6-201ENST00000296581 FAM25EA8MYX2 175 aa13.79□□□□□ -0.2
LSM6-201ENST00000296581 CEACAM4O75871 244 aa13.79□□□□□ -0.2
LSM6-201ENST00000296581 ZNF432O94892 652 aa13.79□□□□□ -0.2
LSM6-201ENST00000296581 RPP14O95059 124 aaKnown RBP13.79□□□□□ -0.2
LSM6-201ENST00000296581 TRAPPC2P0DI81 140 aa13.79□□□□□ -0.2
LSM6-201ENST00000296581 TRAPPC2BP0DI82 140 aa13.79□□□□□ -0.2
LSM6-201ENST00000296581 EIF1AXP47813 144 aaKnown RBP13.79□□□□□ -0.2
LSM6-201ENST00000296581 PPIAP62937 165 aaKnown RBP13.79□□□□□ -0.2
LSM6-201ENST00000296581 HNRNPA0Q13151 305 aaKnown RBP13.79□□□□□ -0.2
LSM6-201ENST00000296581 ALKBH1Q13686 389 aaKnown RBP13.79□□□□□ -0.2
LSM6-201ENST00000296581 RSPO4Q2I0M5 234 aaPredicted RBP13.79□□□□□ -0.2
LSM6-201ENST00000296581 LRFN4Q6PJG9 635 aa13.79□□□□□ -0.2
LSM6-201ENST00000296581 PAMR1Q6UXH9 720 aa13.79□□□□□ -0.2
LSM6-201ENST00000296581 CEACAM19Q7Z692 300 aa13.79□□□□□ -0.2
LSM6-201ENST00000296581 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.79□□□□□ -0.2
LSM6-201ENST00000296581 OR13C5Q8NGS8 318 aa13.79□□□□□ -0.2
LSM6-201ENST00000296581 OR52N5Q8NH56 324 aa13.79□□□□□ -0.2
LSM6-201ENST00000296581 ST7LQ8TDW4 575 aa13.79□□□□□ -0.2
LSM6-201ENST00000296581 CPNE4Q96A23 557 aaPredicted RBP13.79□□□□□ -0.2
LSM6-201ENST00000296581 DACT3Q96B18 629 aaPredicted RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms