RNA–Protein interactions for RNA: ENST00000284771.6

PDLIM3-203, Transcript of PDZ and LIM domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM3, Length 1,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-203ENST00000284771 CLEC2DQ9UHP7 191 aa19.04■□□□□ 0.64
PDLIM3-203ENST00000284771 HCFC1P51610 2035 aa19.03■□□□□ 0.64
PDLIM3-203ENST00000284771 OR5H1A6NKK0 313 aa19.03■□□□□ 0.64
PDLIM3-203ENST00000284771 LIMS3P0CW19 117 aa19.03■□□□□ 0.64
PDLIM3-203ENST00000284771 LIMS4P0CW20 117 aa19.03■□□□□ 0.64
PDLIM3-203ENST00000284771 EEF1B2P24534 225 aaKnown RBP19.03■□□□□ 0.64
PDLIM3-203ENST00000284771 ETV1P50549 477 aa19.03■□□□□ 0.64
PDLIM3-203ENST00000284771 PSG4Q00888 419 aa19.03■□□□□ 0.64
PDLIM3-203ENST00000284771 TMEM154Q6P9G4 183 aa19.03■□□□□ 0.64
PDLIM3-203ENST00000284771 STX19Q8N4C7 294 aa19.03■□□□□ 0.64
PDLIM3-203ENST00000284771 ZNF808Q8N4W9 903 aaPredicted RBP19.03■□□□□ 0.64
PDLIM3-203ENST00000284771 THEM6Q8WUY1 208 aa19.03■□□□□ 0.64
PDLIM3-203ENST00000284771 ZNF75AQ96N20 296 aa19.03■□□□□ 0.64
PDLIM3-203ENST00000284771 KCNJ16Q9NPI9 418 aa19.03■□□□□ 0.64
PDLIM3-203ENST00000284771 PNRC2Q9NPJ4 139 aaKnown RBP19.03■□□□□ 0.64
PDLIM3-203ENST00000284771 ERVK13-1Q9NX77 482 aa19.03■□□□□ 0.64
PDLIM3-203ENST00000284771 BLOC1S6Q9UL45 172 aa19.03■□□□□ 0.64
PDLIM3-203ENST00000284771 POLR1DQ9Y2S0 133 aa19.03■□□□□ 0.64
PDLIM3-203ENST00000284771 WIPF3A6NGB9 483 aa19.02■□□□□ 0.64
PDLIM3-203ENST00000284771 C16orf97H3BN30 126 aa19.02■□□□□ 0.64
PDLIM3-203ENST00000284771 RAB36O95755 333 aa19.02■□□□□ 0.64
PDLIM3-203ENST00000284771 IL32P24001 234 aa19.02■□□□□ 0.64
PDLIM3-203ENST00000284771 CAPZA2P47755 286 aa19.02■□□□□ 0.64
PDLIM3-203ENST00000284771 EIF2B1Q14232 305 aaKnown RBP19.02■□□□□ 0.64
PDLIM3-203ENST00000284771 KCTD21Q4G0X4 260 aa19.02■□□□□ 0.64
PDLIM3-203ENST00000284771 CCDC92Q53HC0 331 aaPredicted RBP19.02■□□□□ 0.64
PDLIM3-203ENST00000284771 OR52N5Q8NH56 324 aa19.02■□□□□ 0.64
PDLIM3-203ENST00000284771 MYDGFQ969H8 173 aa19.02■□□□□ 0.64
PDLIM3-203ENST00000284771 JAM3Q9BX67 310 aa19.02■□□□□ 0.64
PDLIM3-203ENST00000284771 ACTR6Q9GZN1 396 aa19.02■□□□□ 0.64
PDLIM3-203ENST00000284771 LAMP5Q9UJQ1 280 aa19.02■□□□□ 0.64
PDLIM3-203ENST00000284771 PCDHGB1Q9Y5G3 927 aa19.02■□□□□ 0.64
PDLIM3-203ENST00000284771 PSMD9O00233 223 aa19.01■□□□□ 0.63
PDLIM3-203ENST00000284771 TMCC2O75069 709 aa19.01■□□□□ 0.63
PDLIM3-203ENST00000284771 TNFAIP8O95379 198 aa19.01■□□□□ 0.63
PDLIM3-203ENST00000284771 CLDN14O95500 239 aa19.01■□□□□ 0.63
PDLIM3-203ENST00000284771 MT-ND2P03891 347 aa19.01■□□□□ 0.63
PDLIM3-203ENST00000284771 LYNP07948 512 aa19.01■□□□□ 0.63
PDLIM3-203ENST00000284771 GABARAPL2P60520 117 aa19.01■□□□□ 0.63
PDLIM3-203ENST00000284771 RAB1AP62820 205 aa19.01■□□□□ 0.63
PDLIM3-203ENST00000284771 SYT9Q86SS6 491 aa19.01■□□□□ 0.63
PDLIM3-203ENST00000284771 C17orf78Q8N4C9 275 aa19.01■□□□□ 0.63
PDLIM3-203ENST00000284771 OR2H1Q9GZK4 316 aa19.01■□□□□ 0.63
PDLIM3-203ENST00000284771 ZNF696Q9H7X3 374 aa19.01■□□□□ 0.63
PDLIM3-203ENST00000284771 TIMM10BQ9Y5J6 103 aa19.01■□□□□ 0.63
PDLIM3-203ENST00000284771 ARPC4-TTLL3A0A0A6YYG9 625 aa19.01■□□□□ 0.63
PDLIM3-203ENST00000284771 DAPL1A0PJW8 107 aa19.01■□□□□ 0.63
PDLIM3-203ENST00000284771 IRGMA1A4Y4 181 aa19.01■□□□□ 0.63
PDLIM3-203ENST00000284771 RGS10O43665 173 aa19.01■□□□□ 0.63
PDLIM3-203ENST00000284771 CD79AP11912 226 aa19.01■□□□□ 0.63
PDLIM3-203ENST00000284771 HOXB1P14653 301 aaPredicted RBP19.01■□□□□ 0.63
PDLIM3-203ENST00000284771 SNTB1Q13884 538 aaKnown RBP19.01■□□□□ 0.63
PDLIM3-203ENST00000284771 DOC2BQ14184 412 aa19.01■□□□□ 0.63
PDLIM3-203ENST00000284771 TAB1Q15750 504 aa19.01■□□□□ 0.63
PDLIM3-203ENST00000284771 SLC36A2Q495M3 483 aa19.01■□□□□ 0.63
PDLIM3-203ENST00000284771 ZNF684Q5T5D7 378 aa19.01■□□□□ 0.63
PDLIM3-203ENST00000284771 PRSS48Q7RTY5 328 aa19.01■□□□□ 0.63
PDLIM3-203ENST00000284771 ZNF454Q8N9F8 522 aa19.01■□□□□ 0.63
PDLIM3-203ENST00000284771 CPEB3Q8NE35 698 aaKnown RBP19.01■□□□□ 0.63
PDLIM3-203ENST00000284771 GJC3Q8NFK1 279 aa19.01■□□□□ 0.63
PDLIM3-203ENST00000284771 OR2AJ1Q8NGZ0 328 aa19.01■□□□□ 0.63
PDLIM3-203ENST00000284771 AKR7LQ8NHP1 331 aa19.01■□□□□ 0.63
PDLIM3-203ENST00000284771 RNASE6Q93091 150 aaKnown RBP19.01■□□□□ 0.63
PDLIM3-203ENST00000284771 CDCA4Q9BXL8 241 aa19.01■□□□□ 0.63
PDLIM3-203ENST00000284771 WNT5BQ9H1J7 359 aa19.01■□□□□ 0.63
PDLIM3-203ENST00000284771 C1orf198Q9H425 327 aa19.01■□□□□ 0.63
PDLIM3-203ENST00000284771 SLC25A15Q9Y619 301 aa19.01■□□□□ 0.63
PDLIM3-203ENST00000284771 DOPEY1Q5JWR5 2465 aa19.01■□□□□ 0.63
PDLIM3-203ENST00000284771 COL12A1Q99715 3063 aa19■□□□□ 0.63
PDLIM3-203ENST00000284771 AGFG2O95081 481 aa19■□□□□ 0.63
PDLIM3-203ENST00000284771 RPSAP08865 295 aaKnown RBP19■□□□□ 0.63
PDLIM3-203ENST00000284771 IRF3Q14653 427 aa19■□□□□ 0.63
PDLIM3-203ENST00000284771 RSPO1Q2MKA7 263 aaPredicted RBP19■□□□□ 0.63
PDLIM3-203ENST00000284771 TIMM23BQ5SRD1 257 aa19■□□□□ 0.63
PDLIM3-203ENST00000284771 ZNF774Q6NX45 483 aa19■□□□□ 0.63
PDLIM3-203ENST00000284771 ZNF322Q6U7Q0 402 aaPredicted RBP19■□□□□ 0.63
PDLIM3-203ENST00000284771 SPATC1Q76KD6 591 aa19■□□□□ 0.63
PDLIM3-203ENST00000284771 MDP1Q86V88 176 aa19■□□□□ 0.63
PDLIM3-203ENST00000284771 ZNF584Q8IVC4 421 aa19■□□□□ 0.63
PDLIM3-203ENST00000284771 STEAP2Q8NFT2 490 aa19■□□□□ 0.63
PDLIM3-203ENST00000284771 RNF133Q8WVZ7 376 aa19■□□□□ 0.63
PDLIM3-203ENST00000284771 SLAMF6Q96DU3 332 aa19■□□□□ 0.63
PDLIM3-203ENST00000284771 MNTQ99583 582 aa19■□□□□ 0.63
PDLIM3-203ENST00000284771 KCNN2Q9H2S1 579 aa19■□□□□ 0.63
PDLIM3-203ENST00000284771 TMEM14AQ9Y6G1 99 aa19■□□□□ 0.63
PDLIM3-203ENST00000284771 UBE2NP61088 152 aaKnown RBP18.99■□□□□ 0.63
PDLIM3-203ENST00000284771 PCBD1P61457 104 aa18.99■□□□□ 0.63
PDLIM3-203ENST00000284771 ACTC1P68032 377 aa18.99■□□□□ 0.63
PDLIM3-203ENST00000284771 ACTA1P68133 377 aa18.99■□□□□ 0.63
PDLIM3-203ENST00000284771 GALEQ14376 348 aa18.99■□□□□ 0.63
PDLIM3-203ENST00000284771 GSG1Q2KHT4 349 aa18.99■□□□□ 0.63
PDLIM3-203ENST00000284771 PABPC1L2AQ5JQF8 200 aa18.99■□□□□ 0.63
PDLIM3-203ENST00000284771 LRRN1Q6UXK5 716 aa18.99■□□□□ 0.63
PDLIM3-203ENST00000284771 VASH1Q7L8A9 365 aaPredicted RBP18.99■□□□□ 0.63
PDLIM3-203ENST00000284771 CCDC36Q8IYA8 594 aa18.99■□□□□ 0.63
PDLIM3-203ENST00000284771 C1QTNF6Q9BXI9 259 aa18.99■□□□□ 0.63
PDLIM3-203ENST00000284771 CCDC90BQ9GZT6 254 aa18.99■□□□□ 0.63
PDLIM3-203ENST00000284771 RNF121Q9H920 327 aa18.99■□□□□ 0.63
PDLIM3-203ENST00000284771 ISG20L2Q9H9L3 353 aaKnown RBP18.99■□□□□ 0.63
PDLIM3-203ENST00000284771 CCNB1IP1Q9NPC3 277 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms