RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 WNT5BQ9H1J7 359 aa5.65□□□□□ -1.5
CD44-204ENST00000279452 CMC2Q9NRP2 79 aa5.65□□□□□ -1.5
CD44-204ENST00000279452 TVP23BQ9NYZ1 205 aa5.65□□□□□ -1.5
CD44-204ENST00000279452 REV1Q9UBZ9 1251 aa5.65□□□□□ -1.5
CD44-204ENST00000279452 ENOPH1Q9UHY7 261 aa5.65□□□□□ -1.5
CD44-204ENST00000279452 NDRG4Q9ULP0 352 aaKnown RBP5.65□□□□□ -1.5
CD44-204ENST00000279452 GRIP1Q9Y3R0 1128 aa5.65□□□□□ -1.5
CD44-204ENST00000279452 CMAHPQ9Y471 501 aa5.65□□□□□ -1.5
CD44-204ENST00000279452 SPTBN1Q01082 2364 aaKnown RBP5.65□□□□□ -1.51
CD44-204ENST00000279452 MPDZO75970 2070 aa5.65□□□□□ -1.51
CD44-204ENST00000279452 B9A039 149 aa5.64□□□□□ -1.51
CD44-204ENST00000279452 H3BNX3 289 aa5.64□□□□□ -1.51
CD44-204ENST00000279452 M0R129 80 aa5.64□□□□□ -1.51
CD44-204ENST00000279452 EI24O14681 340 aa5.64□□□□□ -1.51
CD44-204ENST00000279452 SURF4O15260 269 aa5.64□□□□□ -1.51
CD44-204ENST00000279452 SSX4O60224 188 aa5.64□□□□□ -1.51
CD44-204ENST00000279452 TMCC2O75069 709 aa5.64□□□□□ -1.51
CD44-204ENST00000279452 SNAP29O95721 258 aa5.64□□□□□ -1.51
CD44-204ENST00000279452 TFP02787 698 aa5.64□□□□□ -1.51
CD44-204ENST00000279452 GAAP10253 952 aa5.64□□□□□ -1.51
CD44-204ENST00000279452 ZNF35P13682 527 aa5.64□□□□□ -1.51
CD44-204ENST00000279452 SLC6A9P48067 706 aa5.64□□□□□ -1.51
CD44-204ENST00000279452 SELENOVP59797 346 aa5.64□□□□□ -1.51
CD44-204ENST00000279452 ERVS71-1P61550 626 aa5.64□□□□□ -1.51
CD44-204ENST00000279452 LSM6P62312 80 aaKnown RBP5.64□□□□□ -1.51
CD44-204ENST00000279452 MAD2L1BPQ15013 274 aaPredicted RBP5.64□□□□□ -1.51
CD44-204ENST00000279452 PTGES3Q15185 160 aaKnown RBP5.64□□□□□ -1.51
CD44-204ENST00000279452 RAB35Q15286 201 aa5.64□□□□□ -1.51
CD44-204ENST00000279452 ADIPOQQ15848 244 aa5.64□□□□□ -1.51
CD44-204ENST00000279452 ELFN2Q5R3F8 820 aa5.64□□□□□ -1.51
CD44-204ENST00000279452 ACSM5Q6NUN0 579 aa5.64□□□□□ -1.51
CD44-204ENST00000279452 SPATC1Q76KD6 591 aa5.64□□□□□ -1.51
CD44-204ENST00000279452 VASH1Q7L8A9 365 aaPredicted RBP5.64□□□□□ -1.51
CD44-204ENST00000279452 CXXC5Q7LFL8 322 aaKnown RBP5.64□□□□□ -1.51
CD44-204ENST00000279452 SYT9Q86SS6 491 aa5.64□□□□□ -1.51
CD44-204ENST00000279452 DTX2Q86UW9 622 aa5.64□□□□□ -1.51
CD44-204ENST00000279452 ZBTB46Q86UZ6 589 aa5.64□□□□□ -1.51
CD44-204ENST00000279452 LRRC75A-AS1Q8N1F1 130 aa5.64□□□□□ -1.51
CD44-204ENST00000279452 ZNF511Q8NB15 262 aa5.64□□□□□ -1.51
CD44-204ENST00000279452 GJC3Q8NFK1 279 aa5.64□□□□□ -1.51
CD44-204ENST00000279452 SLC26A10Q8NG04 563 aa5.64□□□□□ -1.51
CD44-204ENST00000279452 OR1F12Q8NHA8 337 aa5.64□□□□□ -1.51
CD44-204ENST00000279452 SNX33Q8WV41 574 aa5.64□□□□□ -1.51
CD44-204ENST00000279452 EME1Q96AY2 570 aa5.64□□□□□ -1.51
CD44-204ENST00000279452 Q96MF0 132 aa5.64□□□□□ -1.51
CD44-204ENST00000279452 ZNF75AQ96N20 296 aa5.64□□□□□ -1.51
CD44-204ENST00000279452 RBM4BQ9BQ04 359 aaKnown RBP5.64□□□□□ -1.51
CD44-204ENST00000279452 WACQ9BTA9 647 aa5.64□□□□□ -1.51
CD44-204ENST00000279452 RBM4Q9BWF3 364 aaKnown RBP5.64□□□□□ -1.51
CD44-204ENST00000279452 GSX2Q9BZM3 304 aa5.64□□□□□ -1.51
CD44-204ENST00000279452 BCL2L14Q9BZR8 327 aa5.64□□□□□ -1.51
CD44-204ENST00000279452 GRIP2Q9C0E4 1043 aa5.64□□□□□ -1.51
CD44-204ENST00000279452 HDHD2Q9H0R4 259 aa5.64□□□□□ -1.51
CD44-204ENST00000279452 GABARAPL1Q9H0R8 117 aa5.64□□□□□ -1.51
CD44-204ENST00000279452 TPK1Q9H3S4 243 aa5.64□□□□□ -1.51
CD44-204ENST00000279452 ZNF442Q9H7R0 627 aa5.64□□□□□ -1.51
CD44-204ENST00000279452 WDR76Q9H967 626 aa5.64□□□□□ -1.51
CD44-204ENST00000279452 ELOVL3Q9HB03 270 aa5.64□□□□□ -1.51
CD44-204ENST00000279452 BARX1Q9HBU1 254 aaPredicted RBP5.64□□□□□ -1.51
CD44-204ENST00000279452 S100A14Q9HCY8 104 aa5.64□□□□□ -1.51
CD44-204ENST00000279452 CENPMQ9NSP4 180 aa5.64□□□□□ -1.51
CD44-204ENST00000279452 H2AFY2Q9P0M6 372 aaPredicted RBP5.64□□□□□ -1.51
CD44-204ENST00000279452 GDF2Q9UK05 429 aaPredicted RBP5.64□□□□□ -1.51
CD44-204ENST00000279452 N6AMT1Q9Y5N5 214 aa5.64□□□□□ -1.51
CD44-204ENST00000279452 COMMD3-BMI1R4GMX3 469 aa5.64□□□□□ -1.51
CD44-204ENST00000279452 LOC100509620A0A075B734 347 aa5.63□□□□□ -1.51
CD44-204ENST00000279452 OR6C6A6NF89 314 aa5.63□□□□□ -1.51
CD44-204ENST00000279452 F5H5K5 113 aa5.63□□□□□ -1.51
CD44-204ENST00000279452 M0R233 179 aa5.63□□□□□ -1.51
CD44-204ENST00000279452 ZNF593O00488 134 aaPredicted RBP5.63□□□□□ -1.51
CD44-204ENST00000279452 TPD52L2O43399 206 aaKnown RBP5.63□□□□□ -1.51
CD44-204ENST00000279452 TIMM8AO60220 97 aaPredicted RBP5.63□□□□□ -1.51
CD44-204ENST00000279452 NDUFS7O75251 213 aa5.63□□□□□ -1.51
CD44-204ENST00000279452 CD8AP01732 235 aa5.63□□□□□ -1.51
CD44-204ENST00000279452 ADRA2AP08913 450 aa5.63□□□□□ -1.51
CD44-204ENST00000279452 MRPL3P09001 348 aaKnown RBP5.63□□□□□ -1.51
CD44-204ENST00000279452 DBHP09172 617 aa5.63□□□□□ -1.51
CD44-204ENST00000279452 HSD11B1P28845 292 aa5.63□□□□□ -1.51
CD44-204ENST00000279452 GSTT1P30711 240 aa5.63□□□□□ -1.51
CD44-204ENST00000279452 GLRXP35754 106 aa5.63□□□□□ -1.51
CD44-204ENST00000279452 WNT5AP41221 380 aa5.63□□□□□ -1.51
CD44-204ENST00000279452 NAA10P41227 235 aaPredicted RBP5.63□□□□□ -1.51
CD44-204ENST00000279452 ALDH3B1P43353 468 aa5.63□□□□□ -1.51
CD44-204ENST00000279452 ENTPD1P49961 510 aa5.63□□□□□ -1.51
CD44-204ENST00000279452 BLVRAP53004 296 aa5.63□□□□□ -1.51
CD44-204ENST00000279452 SLC25A1P53007 311 aa5.63□□□□□ -1.51
CD44-204ENST00000279452 RAD23AP54725 363 aa5.63□□□□□ -1.51
CD44-204ENST00000279452 UCP2P55851 309 aa5.63□□□□□ -1.51
CD44-204ENST00000279452 KLF3P57682 345 aaPredicted RBP5.63□□□□□ -1.51
CD44-204ENST00000279452 PPP1CBP62140 327 aa5.63□□□□□ -1.51
CD44-204ENST00000279452 ESRRGP62508 458 aa5.63□□□□□ -1.51
CD44-204ENST00000279452 CDK5Q00535 292 aa5.63□□□□□ -1.51
CD44-204ENST00000279452 APOFQ13790 326 aa5.63□□□□□ -1.51
CD44-204ENST00000279452 EIF2B1Q14232 305 aaKnown RBP5.63□□□□□ -1.51
CD44-204ENST00000279452 RCN1Q15293 331 aa5.63□□□□□ -1.51
CD44-204ENST00000279452 EFNB3Q15768 340 aa5.63□□□□□ -1.51
CD44-204ENST00000279452 KCNMB1Q16558 191 aa5.63□□□□□ -1.51
CD44-204ENST00000279452 CLEC12BQ2HXU8 276 aa5.63□□□□□ -1.51
CD44-204ENST00000279452 ZIK1Q3SY52 487 aaPredicted RBP5.63□□□□□ -1.51
CD44-204ENST00000279452 CCDC92Q53HC0 331 aaPredicted RBP5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms