RNA–Protein interactions for RNA: ENST00000275560.3

SSC4D-201, Transcript of scavenger receptor cysteine rich family member with 4 domains, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSC4D, Length 2,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSC4D-201ENST00000275560 CSAG2Q9Y5P2 127 aa16.8■□□□□ 0.28
SSC4D-201ENST00000275560 C5orf51A6NDU8 294 aa16.79■□□□□ 0.28
SSC4D-201ENST00000275560 SOX1O00570 391 aaPredicted RBP16.79■□□□□ 0.28
SSC4D-201ENST00000275560 ZNF208O43345 1280 aa16.79■□□□□ 0.28
SSC4D-201ENST00000275560 ZNF432O94892 652 aa16.79■□□□□ 0.28
SSC4D-201ENST00000275560 ELOCQ15369 112 aa16.79■□□□□ 0.28
SSC4D-201ENST00000275560 ATG4DQ86TL0 474 aaPredicted RBP16.79■□□□□ 0.28
SSC4D-201ENST00000275560 FRMD1Q8N878 549 aa16.79■□□□□ 0.28
SSC4D-201ENST00000275560 OTOSQ8NHW6 89 aa16.79■□□□□ 0.28
SSC4D-201ENST00000275560 SPPL3Q8TCT6 385 aa16.79■□□□□ 0.28
SSC4D-201ENST00000275560 HOXB13Q92826 284 aaPredicted RBP16.79■□□□□ 0.28
SSC4D-201ENST00000275560 Q9N2J8 555 aa16.79■□□□□ 0.28
SSC4D-201ENST00000275560 FAM60AQ9NP50 221 aa16.79■□□□□ 0.28
SSC4D-201ENST00000275560 TRIOO75962 3097 aa16.79■□□□□ 0.28
SSC4D-201ENST00000275560 PCNX3Q9H6A9 2034 aa16.79■□□□□ 0.28
SSC4D-201ENST00000275560 C9orf170A2RU37 121 aa16.79■□□□□ 0.28
SSC4D-201ENST00000275560 ASAH2BP0C7U1 165 aa16.79■□□□□ 0.28
SSC4D-201ENST00000275560 MAOAP21397 527 aa16.79■□□□□ 0.28
SSC4D-201ENST00000275560 C5AR1P21730 350 aa16.79■□□□□ 0.28
SSC4D-201ENST00000275560 SCAND1P57086 179 aa16.79■□□□□ 0.28
SSC4D-201ENST00000275560 ADAM8P78325 824 aa16.79■□□□□ 0.28
SSC4D-201ENST00000275560 SLC17A1Q14916 467 aa16.79■□□□□ 0.28
SSC4D-201ENST00000275560 ETV3LQ6ZN32 361 aa16.79■□□□□ 0.28
SSC4D-201ENST00000275560 LYG2Q86SG7 212 aa16.79■□□□□ 0.28
SSC4D-201ENST00000275560 ASB5Q8WWX0 329 aa16.79■□□□□ 0.28
SSC4D-201ENST00000275560 DCUN1D4Q92564 292 aa16.79■□□□□ 0.28
SSC4D-201ENST00000275560 PHYHIPLQ96FC7 376 aa16.79■□□□□ 0.28
SSC4D-201ENST00000275560 SLC25A44Q96H78 314 aaPredicted RBP16.79■□□□□ 0.28
SSC4D-201ENST00000275560 EDEM2Q9BV94 578 aa16.79■□□□□ 0.28
SSC4D-201ENST00000275560 MEX3AA1L020 520 aaKnown RBP16.78■□□□□ 0.28
SSC4D-201ENST00000275560 RAB19A4D1S5 217 aa16.78■□□□□ 0.28
SSC4D-201ENST00000275560 MELTFP08582 738 aa16.78■□□□□ 0.28
SSC4D-201ENST00000275560 MNX1P50219 401 aaPredicted RBP16.78■□□□□ 0.28
SSC4D-201ENST00000275560 EGR3Q06889 387 aa16.78■□□□□ 0.28
SSC4D-201ENST00000275560 PDZK1IP1Q13113 114 aa16.78■□□□□ 0.28
SSC4D-201ENST00000275560 EEF1A1P5Q5VTE0 462 aa16.78■□□□□ 0.28
SSC4D-201ENST00000275560 TANGO2Q6ICL3 276 aa16.78■□□□□ 0.28
SSC4D-201ENST00000275560 UQCC3Q6UW78 93 aa16.78■□□□□ 0.28
SSC4D-201ENST00000275560 ZNF584Q8IVC4 421 aa16.78■□□□□ 0.28
SSC4D-201ENST00000275560 ARMC10Q8N2F6 343 aa16.78■□□□□ 0.28
SSC4D-201ENST00000275560 TRIM43Q96BQ3 446 aaPredicted RBP16.78■□□□□ 0.28
SSC4D-201ENST00000275560 CCDC3Q9BQI4 270 aa16.78■□□□□ 0.28
SSC4D-201ENST00000275560 BIN3Q9NQY0 253 aa16.78■□□□□ 0.28
SSC4D-201ENST00000275560 LOC101059948A0A1B0GTJ6 334 aa16.78■□□□□ 0.28
SSC4D-201ENST00000275560 EIF3GO75821 320 aaKnown RBP eCLIP16.78■□□□□ 0.28
SSC4D-201ENST00000275560 MPZL1O95297 269 aa16.78■□□□□ 0.28
SSC4D-201ENST00000275560 ERCC1P07992 297 aaPredicted RBP16.78■□□□□ 0.28
SSC4D-201ENST00000275560 GDI1P31150 447 aa16.78■□□□□ 0.28
SSC4D-201ENST00000275560 RBM39Q14498 530 aaKnown RBP16.78■□□□□ 0.28
SSC4D-201ENST00000275560 DHRS7BQ6IAN0 325 aaPredicted RBP16.78■□□□□ 0.28
SSC4D-201ENST00000275560 TMEM184AQ6ZMB5 413 aa16.78■□□□□ 0.28
SSC4D-201ENST00000275560 ZNF813Q6ZN06 617 aa16.78■□□□□ 0.28
SSC4D-201ENST00000275560 FJX1Q86VR8 437 aa16.78■□□□□ 0.28
SSC4D-201ENST00000275560 PARGQ86W56 976 aa16.78■□□□□ 0.28
SSC4D-201ENST00000275560 SPAG16Q8N0X2 631 aa16.78■□□□□ 0.28
SSC4D-201ENST00000275560 GLYATL2Q8WU03 294 aa16.78■□□□□ 0.28
SSC4D-201ENST00000275560 EDAQ92838 391 aa16.78■□□□□ 0.28
SSC4D-201ENST00000275560 PIK3IP1Q96FE7 263 aa16.78■□□□□ 0.28
SSC4D-201ENST00000275560 SLC19A3Q9BZV2 496 aa16.78■□□□□ 0.28
SSC4D-201ENST00000275560 DHCR7Q9UBM7 475 aaKnown RBP16.78■□□□□ 0.28
SSC4D-201ENST00000275560 RENP00797 406 aa16.78■□□□□ 0.28
SSC4D-201ENST00000275560 CD96P40200 585 aa16.78■□□□□ 0.28
SSC4D-201ENST00000275560 PRMT2P55345 433 aa16.78■□□□□ 0.28
SSC4D-201ENST00000275560 NKAPLQ5M9Q1 402 aa16.78■□□□□ 0.28
SSC4D-201ENST00000275560 CHRDL2Q6WN34 429 aa16.78■□□□□ 0.28
SSC4D-201ENST00000275560 SLC16A13Q7RTY0 426 aa16.78■□□□□ 0.28
SSC4D-201ENST00000275560 OR4D6Q8NGJ1 314 aa16.78■□□□□ 0.28
SSC4D-201ENST00000275560 NANPQ8TBE9 248 aa16.78■□□□□ 0.28
SSC4D-201ENST00000275560 ASB13Q8WXK3 278 aa16.78■□□□□ 0.28
SSC4D-201ENST00000275560 FBXO17Q96EF6 278 aa16.78■□□□□ 0.28
SSC4D-201ENST00000275560 OR8B4Q96RC9 309 aa16.78■□□□□ 0.28
SSC4D-201ENST00000275560 HRH4Q9H3N8 390 aa16.78■□□□□ 0.28
SSC4D-201ENST00000275560 FN3KRPQ9HA64 309 aa16.78■□□□□ 0.28
SSC4D-201ENST00000275560 LINC00587B1AMM8 73 aa16.77■□□□□ 0.28
SSC4D-201ENST00000275560 PRSS44E7EML9 344 aa16.77■□□□□ 0.28
SSC4D-201ENST00000275560 AKR1C3P42330 323 aa16.77■□□□□ 0.28
SSC4D-201ENST00000275560 TRAPPC6BQ86SZ2 158 aa16.77■□□□□ 0.28
SSC4D-201ENST00000275560 SLC25A42Q86VD7 318 aa16.77■□□□□ 0.28
SSC4D-201ENST00000275560 PAQR4Q8N4S7 273 aaPredicted RBP16.77■□□□□ 0.28
SSC4D-201ENST00000275560 CHST4Q8NCG5 386 aa16.77■□□□□ 0.28
SSC4D-201ENST00000275560 SFT2D1Q8WV19 159 aa16.77■□□□□ 0.28
SSC4D-201ENST00000275560 SLC25A36Q96CQ1 311 aa16.77■□□□□ 0.28
SSC4D-201ENST00000275560 FOXRED1Q96CU9 486 aaPredicted RBP16.77■□□□□ 0.28
SSC4D-201ENST00000275560 UQCC2Q9BRT2 126 aa16.77■□□□□ 0.28
SSC4D-201ENST00000275560 OR2S2Q9NQN1 319 aa16.77■□□□□ 0.28
SSC4D-201ENST00000275560 MSGN1A6NI15 193 aa16.77■□□□□ 0.27
SSC4D-201ENST00000275560 FGF16O43320 207 aa16.77■□□□□ 0.27
SSC4D-201ENST00000275560 RAB38P57729 211 aa16.77■□□□□ 0.27
SSC4D-201ENST00000275560 KLHL26Q53HC5 615 aa16.77■□□□□ 0.27
SSC4D-201ENST00000275560 RNASE10Q5GAN6 216 aaKnown RBP16.77■□□□□ 0.27
SSC4D-201ENST00000275560 RBMS3Q6XE24 437 aaKnown RBP16.77■□□□□ 0.27
SSC4D-201ENST00000275560 BAHD1Q8TBE0 780 aaPredicted RBP16.77■□□□□ 0.27
SSC4D-201ENST00000275560 RTN4RQ9BZR6 473 aa16.77■□□□□ 0.27
SSC4D-201ENST00000275560 HRASLS2Q9NWW9 162 aa16.77■□□□□ 0.27
SSC4D-201ENST00000275560 AGPAT2O15120 278 aa16.76■□□□□ 0.27
SSC4D-201ENST00000275560 CD74P04233 296 aa16.76■□□□□ 0.27
SSC4D-201ENST00000275560 HRH1P35367 487 aa16.76■□□□□ 0.27
SSC4D-201ENST00000275560 SERPINF1P36955 418 aa16.76■□□□□ 0.27
SSC4D-201ENST00000275560 TFF2Q03403 129 aa16.76■□□□□ 0.27
SSC4D-201ENST00000275560 SRSF4Q08170 494 aaKnown RBP16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms