RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 MBNL2Q5VZF2 373 aaKnown RBP13.71□□□□□ -0.21
USE1-201ENST00000263897 ARL9Q6T311 187 aa13.71□□□□□ -0.21
USE1-201ENST00000263897 PTCHD4Q6ZW05 846 aa13.71□□□□□ -0.21
USE1-201ENST00000263897 GLB1L2Q8IW92 636 aa13.71□□□□□ -0.21
USE1-201ENST00000263897 FITM2Q8N6M3 262 aa13.71□□□□□ -0.21
USE1-201ENST00000263897 LINC01356Q8N9X3 169 aa13.71□□□□□ -0.21
USE1-201ENST00000263897 ABHD4Q8TB40 342 aa13.71□□□□□ -0.21
USE1-201ENST00000263897 NUAK2Q9H093 628 aa13.71□□□□□ -0.21
USE1-201ENST00000263897 RERGLQ9H628 205 aa13.71□□□□□ -0.21
USE1-201ENST00000263897 KLHL21Q9UJP4 597 aa13.71□□□□□ -0.21
USE1-201ENST00000263897 NDRG4Q9ULP0 352 aaKnown RBP13.71□□□□□ -0.21
USE1-201ENST00000263897 B2RBV5 119 aa13.7□□□□□ -0.22
USE1-201ENST00000263897 PPIHO43447 177 aaKnown RBP13.7□□□□□ -0.22
USE1-201ENST00000263897 SGCEO43556 437 aa13.7□□□□□ -0.22
USE1-201ENST00000263897 OR10H3O60404 316 aa13.7□□□□□ -0.22
USE1-201ENST00000263897 MPZL1O95297 269 aa13.7□□□□□ -0.22
USE1-201ENST00000263897 RRM2P31350 389 aa13.7□□□□□ -0.22
USE1-201ENST00000263897 CRYBB2P43320 205 aa13.7□□□□□ -0.22
USE1-201ENST00000263897 ZNF81P51508 661 aa13.7□□□□□ -0.22
USE1-201ENST00000263897 MMP15P51511 669 aa13.7□□□□□ -0.22
USE1-201ENST00000263897 ARHGDIAP52565 204 aa13.7□□□□□ -0.22
USE1-201ENST00000263897 CDH15P55291 814 aa13.7□□□□□ -0.22
USE1-201ENST00000263897 GLO1Q04760 184 aa13.7□□□□□ -0.22
USE1-201ENST00000263897 KCNMB1Q16558 191 aa13.7□□□□□ -0.22
USE1-201ENST00000263897 TMEM255AQ5JRV8 349 aa13.7□□□□□ -0.22
USE1-201ENST00000263897 RFPL4BQ6ZWI9 263 aa13.7□□□□□ -0.22
USE1-201ENST00000263897 ZDHHC21Q8IVQ6 265 aa13.7□□□□□ -0.22
USE1-201ENST00000263897 IPCEF1Q8WWN9 437 aaPredicted RBP13.7□□□□□ -0.22
USE1-201ENST00000263897 GTF3AQ92664 365 aaKnown RBP13.7□□□□□ -0.22
USE1-201ENST00000263897 NSL1Q96IY1 281 aa13.7□□□□□ -0.22
USE1-201ENST00000263897 ERMAPQ96PL5 475 aaPredicted RBP13.7□□□□□ -0.22
USE1-201ENST00000263897 DECR2Q9NUI1 292 aa13.7□□□□□ -0.22
USE1-201ENST00000263897 TMCC3Q9ULS5 477 aa13.7□□□□□ -0.22
USE1-201ENST00000263897 H3BSA7 217 aa13.69□□□□□ -0.22
USE1-201ENST00000263897 WNT9BO14905 357 aa13.69□□□□□ -0.22
USE1-201ENST00000263897 ARPC3O15145 178 aa13.69□□□□□ -0.22
USE1-201ENST00000263897 CDC14BO60729 498 aa13.69□□□□□ -0.22
USE1-201ENST00000263897 PPP1R3DO95685 299 aa13.69□□□□□ -0.22
USE1-201ENST00000263897 TUBG1P23258 451 aa13.69□□□□□ -0.22
USE1-201ENST00000263897 FPR3P25089 353 aa13.69□□□□□ -0.22
USE1-201ENST00000263897 CRABP1P29762 137 aa13.69□□□□□ -0.22
USE1-201ENST00000263897 SLC6A6P31641 620 aa13.69□□□□□ -0.22
USE1-201ENST00000263897 IFNGR2P38484 337 aa13.69□□□□□ -0.22
USE1-201ENST00000263897 LIPAP38571 399 aa13.69□□□□□ -0.22
USE1-201ENST00000263897 GSSP48637 474 aa13.69□□□□□ -0.22
USE1-201ENST00000263897 HMGA2P52926 109 aa13.69□□□□□ -0.22
USE1-201ENST00000263897 TEKQ02763 1124 aa13.69□□□□□ -0.22
USE1-201ENST00000263897 AQP6Q13520 282 aa13.69□□□□□ -0.22
USE1-201ENST00000263897 CCNIQ14094 377 aa13.69□□□□□ -0.22
USE1-201ENST00000263897 TSTQ16762 297 aaKnown RBP13.69□□□□□ -0.22
USE1-201ENST00000263897 CR1LQ2VPA4 569 aa13.69□□□□□ -0.22
USE1-201ENST00000263897 OTPQ5XKR4 325 aa13.69□□□□□ -0.22
USE1-201ENST00000263897 C1orf94Q6P1W5 598 aa13.69□□□□□ -0.22
USE1-201ENST00000263897 VASH1Q7L8A9 365 aaPredicted RBP13.69□□□□□ -0.22
USE1-201ENST00000263897 CXXC5Q7LFL8 322 aaKnown RBP13.69□□□□□ -0.22
USE1-201ENST00000263897 CLDND2Q8NHS1 167 aa13.69□□□□□ -0.22
USE1-201ENST00000263897 TSSK2Q96PF2 358 aa13.69□□□□□ -0.22
USE1-201ENST00000263897 OR52D1Q9H346 318 aa13.69□□□□□ -0.22
USE1-201ENST00000263897 TUBG2Q9NRH3 451 aa13.69□□□□□ -0.22
USE1-201ENST00000263897 TBCCD1Q9NVR7 557 aa13.69□□□□□ -0.22
USE1-201ENST00000263897 ACTR3BQ9P1U1 418 aa13.69□□□□□ -0.22
USE1-201ENST00000263897 IGHV1-69-2A0A0G2JMI3 117 aa13.68□□□□□ -0.22
USE1-201ENST00000263897 PLSCR5A0PG75 271 aa13.68□□□□□ -0.22
USE1-201ENST00000263897 B4DSR2 109 aa13.68□□□□□ -0.22
USE1-201ENST00000263897 DCTN6O00399 190 aa13.68□□□□□ -0.22
USE1-201ENST00000263897 TPD52L2O43399 206 aaKnown RBP13.68□□□□□ -0.22
USE1-201ENST00000263897 DOK2O60496 412 aa13.68□□□□□ -0.22
USE1-201ENST00000263897 KRT36O76013 467 aa13.68□□□□□ -0.22
USE1-201ENST00000263897 ABHD16AO95870 558 aa13.68□□□□□ -0.22
USE1-201ENST00000263897 IGHV1-46P01743 117 aa13.68□□□□□ -0.22
USE1-201ENST00000263897 ADH4P08319 380 aa13.68□□□□□ -0.22
USE1-201ENST00000263897 SRD5A1P18405 259 aa13.68□□□□□ -0.22
USE1-201ENST00000263897 HNF1AP20823 631 aa13.68□□□□□ -0.22
USE1-201ENST00000263897 THBS2P35442 1172 aa13.68□□□□□ -0.22
USE1-201ENST00000263897 HTR5AP47898 357 aa13.68□□□□□ -0.22
USE1-201ENST00000263897 FAM209AQ5JX71 171 aa13.68□□□□□ -0.22
USE1-201ENST00000263897 CYP2R1Q6VVX0 501 aa13.68□□□□□ -0.22
USE1-201ENST00000263897 IL17RELQ6ZVW7 336 aa13.68□□□□□ -0.22
USE1-201ENST00000263897 USP51Q70EK9 711 aa13.68□□□□□ -0.22
USE1-201ENST00000263897 ARHGAP24Q8N264 748 aa13.68□□□□□ -0.22
USE1-201ENST00000263897 FANK1Q8TC84 345 aa13.68□□□□□ -0.22
USE1-201ENST00000263897 GNPDA2Q8TDQ7 276 aa13.68□□□□□ -0.22
USE1-201ENST00000263897 SAMD8Q96LT4 415 aa13.68□□□□□ -0.22
USE1-201ENST00000263897 SRA1Q9HD15 236 aaKnown RBP13.68□□□□□ -0.22
USE1-201ENST00000263897 CYSLTR2Q9NS75 346 aa13.68□□□□□ -0.22
USE1-201ENST00000263897 PLEK2Q9NYT0 353 aa13.68□□□□□ -0.22
USE1-201ENST00000263897 TREM2Q9NZC2 230 aa13.68□□□□□ -0.22
USE1-201ENST00000263897 ASH2LQ9UBL3 628 aa13.68□□□□□ -0.22
USE1-201ENST00000263897 TMEFF2Q9UIK5 374 aaPredicted RBP13.68□□□□□ -0.22
USE1-201ENST00000263897 B9D1Q9UPM9 204 aa13.68□□□□□ -0.22
USE1-201ENST00000263897 GRIP1Q9Y3R0 1128 aa13.68□□□□□ -0.22
USE1-201ENST00000263897 STAB1Q9NY15 2570 aa13.68□□□□□ -0.22
USE1-201ENST00000263897 OR6C6A6NF89 314 aa13.67□□□□□ -0.22
USE1-201ENST00000263897 ZSCAN5BA6NJL1 495 aa13.67□□□□□ -0.22
USE1-201ENST00000263897 SPRY3O43610 288 aa13.67□□□□□ -0.22
USE1-201ENST00000263897 IDH3BO43837 385 aa13.67□□□□□ -0.22
USE1-201ENST00000263897 FAM107AO95990 144 aa13.67□□□□□ -0.22
USE1-201ENST00000263897 TFP02787 698 aa13.67□□□□□ -0.22
USE1-201ENST00000263897 CENPAP49450 140 aa13.67□□□□□ -0.22
USE1-201ENST00000263897 DVL1P1P54792 670 aaPredicted RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms