RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 PNMA8CA0A1B0GUJ8 204 aa8.52□□□□□ -1.04
SNRNP40-201ENST00000263694 EEF1E1-BLOC1S5C9J1V9 151 aa8.52□□□□□ -1.04
SNRNP40-201ENST00000263694 MYL12BO14950 172 aa8.52□□□□□ -1.04
SNRNP40-201ENST00000263694 EEF1E1O43324 174 aaKnown RBP8.52□□□□□ -1.04
SNRNP40-201ENST00000263694 MRPS14O60783 128 aaKnown RBP8.52□□□□□ -1.04
SNRNP40-201ENST00000263694 RPP14O95059 124 aaKnown RBP8.52□□□□□ -1.04
SNRNP40-201ENST00000263694 HLA-HP01893 362 aa8.52□□□□□ -1.04
SNRNP40-201ENST00000263694 PSMB9P28065 219 aa8.52□□□□□ -1.04
SNRNP40-201ENST00000263694 GTF2A1P52655 376 aaPredicted RBP8.52□□□□□ -1.04
SNRNP40-201ENST00000263694 GP2P55259 537 aaKnown RBP8.52□□□□□ -1.04
SNRNP40-201ENST00000263694 LSM6P62312 80 aaKnown RBP8.52□□□□□ -1.04
SNRNP40-201ENST00000263694 BLMHQ13867 455 aa8.52□□□□□ -1.04
SNRNP40-201ENST00000263694 TBCEQ15813 527 aaPredicted RBP8.52□□□□□ -1.04
SNRNP40-201ENST00000263694 TEX30Q5JUR7 227 aa8.52□□□□□ -1.04
SNRNP40-201ENST00000263694 ZNF684Q5T5D7 378 aa8.52□□□□□ -1.04
SNRNP40-201ENST00000263694 KLBQ86Z14 1044 aa8.52□□□□□ -1.04
SNRNP40-201ENST00000263694 GABRG1Q8N1C3 465 aa8.52□□□□□ -1.04
SNRNP40-201ENST00000263694 ZNF843Q8N446 348 aa8.52□□□□□ -1.04
SNRNP40-201ENST00000263694 KLHL36Q8N4N3 616 aa8.52□□□□□ -1.04
SNRNP40-201ENST00000263694 SVOPQ8N4V2 548 aa8.52□□□□□ -1.04
SNRNP40-201ENST00000263694 RELL2Q8NC24 303 aaPredicted RBP8.52□□□□□ -1.04
SNRNP40-201ENST00000263694 ZNF485Q8NCK3 441 aa8.52□□□□□ -1.04
SNRNP40-201ENST00000263694 OR1K1Q8NGR3 316 aa8.52□□□□□ -1.04
SNRNP40-201ENST00000263694 OR2AJ1Q8NGZ0 328 aa8.52□□□□□ -1.04
SNRNP40-201ENST00000263694 ST7LQ8TDW4 575 aa8.52□□□□□ -1.04
SNRNP40-201ENST00000263694 SNX33Q8WV41 574 aa8.52□□□□□ -1.04
SNRNP40-201ENST00000263694 RND1Q92730 232 aa8.52□□□□□ -1.04
SNRNP40-201ENST00000263694 BCL2L2Q92843 193 aaPredicted RBP8.52□□□□□ -1.04
SNRNP40-201ENST00000263694 MUL1Q969V5 352 aa8.52□□□□□ -1.04
SNRNP40-201ENST00000263694 C4orf36Q96KX1 117 aa8.52□□□□□ -1.04
SNRNP40-201ENST00000263694 ZFP3Q96NJ6 502 aa8.52□□□□□ -1.04
SNRNP40-201ENST00000263694 SFXN3Q9BWM7 321 aa8.52□□□□□ -1.04
SNRNP40-201ENST00000263694 NOX3Q9HBY0 568 aa8.52□□□□□ -1.04
SNRNP40-201ENST00000263694 CENPMQ9NSP4 180 aa8.52□□□□□ -1.04
SNRNP40-201ENST00000263694 MRM2Q9UI43 246 aaKnown RBP8.52□□□□□ -1.04
SNRNP40-201ENST00000263694 GNG8Q9UK08 70 aa8.52□□□□□ -1.04
SNRNP40-201ENST00000263694 IKZF2Q9UKS7 526 aa8.52□□□□□ -1.04
SNRNP40-201ENST00000263694 GRIP1Q9Y3R0 1128 aa8.52□□□□□ -1.04
SNRNP40-201ENST00000263694 CHD6Q8TD26 2715 aa8.52□□□□□ -1.05
SNRNP40-201ENST00000263694 TMEM129A0AVI4 362 aa8.52□□□□□ -1.05
SNRNP40-201ENST00000263694 CIB4A0PJX0 185 aa8.52□□□□□ -1.05
SNRNP40-201ENST00000263694 HSPB2A8KAH6 182 aa8.52□□□□□ -1.05
SNRNP40-201ENST00000263694 B8ZZF3 427 aa8.52□□□□□ -1.05
SNRNP40-201ENST00000263694 PYCARD-AS1I3L0S3 204 aa8.52□□□□□ -1.05
SNRNP40-201ENST00000263694 CST2P09228 141 aa8.52□□□□□ -1.05
SNRNP40-201ENST00000263694 CD8BP10966 210 aa8.52□□□□□ -1.05
SNRNP40-201ENST00000263694 ZNF32P17041 273 aa8.52□□□□□ -1.05
SNRNP40-201ENST00000263694 NPR2P20594 1047 aa8.52□□□□□ -1.05
SNRNP40-201ENST00000263694 OPRM1P35372 400 aa8.52□□□□□ -1.05
SNRNP40-201ENST00000263694 CAPZA2P47755 286 aa8.52□□□□□ -1.05
SNRNP40-201ENST00000263694 WNT4P56705 351 aa8.52□□□□□ -1.05
SNRNP40-201ENST00000263694 ACTC1P68032 377 aa8.52□□□□□ -1.05
SNRNP40-201ENST00000263694 ACTA1P68133 377 aa8.52□□□□□ -1.05
SNRNP40-201ENST00000263694 ADORA2A-AS1P86434 159 aa8.52□□□□□ -1.05
SNRNP40-201ENST00000263694 SPHARQ15513 63 aa8.52□□□□□ -1.05
SNRNP40-201ENST00000263694 CDSNQ15517 529 aa8.52□□□□□ -1.05
SNRNP40-201ENST00000263694 HSPB2Q16082 182 aa8.52□□□□□ -1.05
SNRNP40-201ENST00000263694 CDONQ4KMG0 1287 aa8.52□□□□□ -1.05
SNRNP40-201ENST00000263694 CCDC92Q53HC0 331 aaPredicted RBP8.52□□□□□ -1.05
SNRNP40-201ENST00000263694 RNLSQ5VYX0 342 aa8.52□□□□□ -1.05
SNRNP40-201ENST00000263694 TMEM211Q6ICI0 200 aa8.52□□□□□ -1.05
SNRNP40-201ENST00000263694 SLC16A14Q7RTX9 510 aa8.52□□□□□ -1.05
SNRNP40-201ENST00000263694 ABHD12BQ7Z5M8 362 aaPredicted RBP8.52□□□□□ -1.05
SNRNP40-201ENST00000263694 SATL1Q86VE3 508 aa8.52□□□□□ -1.05
SNRNP40-201ENST00000263694 YIPF7Q8N8F6 280 aa8.52□□□□□ -1.05
SNRNP40-201ENST00000263694 AKR7LQ8NHP1 331 aa8.52□□□□□ -1.05
SNRNP40-201ENST00000263694 SLC7A6Q92536 515 aa8.52□□□□□ -1.05
SNRNP40-201ENST00000263694 RORBQ92753 470 aa8.52□□□□□ -1.05
SNRNP40-201ENST00000263694 SLAMF6Q96DU3 332 aa8.52□□□□□ -1.05
SNRNP40-201ENST00000263694 MND1Q9BWT6 205 aa8.52□□□□□ -1.05
SNRNP40-201ENST00000263694 ELOVL3Q9HB03 270 aa8.52□□□□□ -1.05
SNRNP40-201ENST00000263694 INPP5EQ9NRR6 644 aa8.52□□□□□ -1.05
SNRNP40-201ENST00000263694 ACOXLQ9NUZ1 547 aa8.52□□□□□ -1.05
SNRNP40-201ENST00000263694 FBXL3Q9UKT7 428 aa8.52□□□□□ -1.05
SNRNP40-201ENST00000263694 SLC5A6Q9Y289 635 aa8.52□□□□□ -1.05
SNRNP40-201ENST00000263694 CAB39Q9Y376 341 aaPredicted RBP8.52□□□□□ -1.05
SNRNP40-201ENST00000263694 SIRT4Q9Y6E7 314 aaPredicted RBP8.52□□□□□ -1.05
SNRNP40-201ENST00000263694 ZNF462Q96JM2 2506 aa8.51□□□□□ -1.05
SNRNP40-201ENST00000263694 METTL15A6NJ78 407 aa8.51□□□□□ -1.05
SNRNP40-201ENST00000263694 A8MXE2 369 aa8.51□□□□□ -1.05
SNRNP40-201ENST00000263694 DOK2O60496 412 aa8.51□□□□□ -1.05
SNRNP40-201ENST00000263694 TMCC2O75069 709 aa8.51□□□□□ -1.05
SNRNP40-201ENST00000263694 CD79AP11912 226 aa8.51□□□□□ -1.05
SNRNP40-201ENST00000263694 JUNBP17275 347 aaPredicted RBP8.51□□□□□ -1.05
SNRNP40-201ENST00000263694 ANOS1P23352 680 aa8.51□□□□□ -1.05
SNRNP40-201ENST00000263694 RPL5P46777 297 aaKnown RBP8.51□□□□□ -1.05
SNRNP40-201ENST00000263694 ALDH3B2P48448 385 aa8.51□□□□□ -1.05
SNRNP40-201ENST00000263694 NR1H2P55055 460 aa8.51□□□□□ -1.05
SNRNP40-201ENST00000263694 PSG4Q00888 419 aa8.51□□□□□ -1.05
SNRNP40-201ENST00000263694 FAM27E3Q08E93 113 aa8.51□□□□□ -1.05
SNRNP40-201ENST00000263694 AQP6Q13520 282 aa8.51□□□□□ -1.05
SNRNP40-201ENST00000263694 RAB39AQ14964 217 aa8.51□□□□□ -1.05
SNRNP40-201ENST00000263694 GABRA6Q16445 453 aa8.51□□□□□ -1.05
SNRNP40-201ENST00000263694 TIGD6Q17RP2 521 aa8.51□□□□□ -1.05
SNRNP40-201ENST00000263694 TBRG1Q3YBR2 411 aa8.51□□□□□ -1.05
SNRNP40-201ENST00000263694 ARMCX4Q5H9R4 360 aa8.51□□□□□ -1.05
SNRNP40-201ENST00000263694 UBE2UQ5VVX9 321 aa8.51□□□□□ -1.05
SNRNP40-201ENST00000263694 OR7E24Q6IFN5 339 aa8.51□□□□□ -1.05
SNRNP40-201ENST00000263694 ZNF774Q6NX45 483 aa8.51□□□□□ -1.05
SNRNP40-201ENST00000263694 ANKRD16Q6P6B7 361 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms