RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 S100PBPQ96BU1 408 aa3.2□□□□□ -1.9
CCDC54-201ENST00000261058 MYOZ1Q9NP98 299 aaPredicted RBP3.2□□□□□ -1.9
CCDC54-201ENST00000261058 GPATCH2LQ9NWQ4 482 aa3.2□□□□□ -1.9
CCDC54-201ENST00000261058 TAS2R1Q9NYW7 299 aa3.2□□□□□ -1.9
CCDC54-201ENST00000261058 CD274Q9NZQ7 290 aa3.2□□□□□ -1.9
CCDC54-201ENST00000261058 TMEM9Q9P0T7 183 aa3.2□□□□□ -1.9
CCDC54-201ENST00000261058 SLC17A7Q9P2U7 560 aa3.2□□□□□ -1.9
CCDC54-201ENST00000261058 ARL2BPQ9Y2Y0 163 aa3.2□□□□□ -1.9
CCDC54-201ENST00000261058 ACOT9Q9Y305 439 aa3.2□□□□□ -1.9
CCDC54-201ENST00000261058 NRCAMQ92823 1304 aa3.2□□□□□ -1.9
CCDC54-201ENST00000261058 LRPPRCP42704 1394 aaKnown RBP3.2□□□□□ -1.9
CCDC54-201ENST00000261058 RTL9Q8NET4 1388 aa3.2□□□□□ -1.9
CCDC54-201ENST00000261058 A0A1W2PPV9 198 aa3.19□□□□□ -1.9
CCDC54-201ENST00000261058 FAM74A7A6NL05 159 aa3.19□□□□□ -1.9
CCDC54-201ENST00000261058 OR2AT4A6NND4 320 aa3.19□□□□□ -1.9
CCDC54-201ENST00000261058 TMEM238C9JI98 176 aa3.19□□□□□ -1.9
CCDC54-201ENST00000261058 MKRN2OSH3BPM6 223 aa3.19□□□□□ -1.9
CCDC54-201ENST00000261058 TEX46H3BTG2 121 aa3.19□□□□□ -1.9
CCDC54-201ENST00000261058 AQRO60306 1485 aaKnown RBP eCLIP3.19□□□□□ -1.9
CCDC54-201ENST00000261058 ETHE1O95571 254 aa3.19□□□□□ -1.9
CCDC54-201ENST00000261058 TMEM50AO95807 157 aa3.19□□□□□ -1.9
CCDC54-201ENST00000261058 RPN2P04844 631 aa3.19□□□□□ -1.9
CCDC54-201ENST00000261058 SLC35E2BP0CK96 405 aa3.19□□□□□ -1.9
CCDC54-201ENST00000261058 SMIM10L1P0DMW3 83 aa3.19□□□□□ -1.9
CCDC54-201ENST00000261058 CD36P16671 472 aa3.19□□□□□ -1.9
CCDC54-201ENST00000261058 ZNF43P17038 809 aa3.19□□□□□ -1.9
CCDC54-201ENST00000261058 CD1CP29017 333 aa3.19□□□□□ -1.9
CCDC54-201ENST00000261058 RPL13AP40429 203 aaKnown RBP3.19□□□□□ -1.9
CCDC54-201ENST00000261058 CAPZBP47756 277 aa3.19□□□□□ -1.9
CCDC54-201ENST00000261058 OMPP47874 163 aa3.19□□□□□ -1.9
CCDC54-201ENST00000261058 ERFP50548 548 aa3.19□□□□□ -1.9
CCDC54-201ENST00000261058 PKNOX1P55347 436 aa3.19□□□□□ -1.9
CCDC54-201ENST00000261058 RPL32P62910 135 aaKnown RBP3.19□□□□□ -1.9
CCDC54-201ENST00000261058 NTHL1P78549 312 aa3.19□□□□□ -1.9
CCDC54-201ENST00000261058 HPCAP84074 193 aa3.19□□□□□ -1.9
CCDC54-201ENST00000261058 FLI1Q01543 452 aaPredicted RBP3.19□□□□□ -1.9
CCDC54-201ENST00000261058 CHRNB3Q05901 458 aa3.19□□□□□ -1.9
CCDC54-201ENST00000261058 RIPPLY1Q0D2K3 151 aa3.19□□□□□ -1.9
CCDC54-201ENST00000261058 MADCAM1Q13477 382 aa3.19□□□□□ -1.9
CCDC54-201ENST00000261058 ZNHIT3Q15649 155 aaPredicted RBP3.19□□□□□ -1.9
CCDC54-201ENST00000261058 FAM74A3Q4VXF1 159 aa3.19□□□□□ -1.9
CCDC54-201ENST00000261058 C5orf47Q569G3 176 aa3.19□□□□□ -1.9
CCDC54-201ENST00000261058 C9orf129Q5T035 196 aaKnown RBP3.19□□□□□ -1.9
CCDC54-201ENST00000261058 GPR107Q5VW38 600 aa3.19□□□□□ -1.9
CCDC54-201ENST00000261058 ELP2Q6IA86 826 aa3.19□□□□□ -1.9
CCDC54-201ENST00000261058 TMPRSS11AQ6ZMR5 421 aa3.19□□□□□ -1.9
CCDC54-201ENST00000261058 PGAP1Q75T13 922 aa3.19□□□□□ -1.9
CCDC54-201ENST00000261058 NIPA1Q7RTP0 329 aa3.19□□□□□ -1.9
CCDC54-201ENST00000261058 C17orf82Q86X59 251 aaPredicted RBP3.19□□□□□ -1.9
CCDC54-201ENST00000261058 ZNF584Q8IVC4 421 aa3.19□□□□□ -1.9
CCDC54-201ENST00000261058 ZBED8Q8IZ13 594 aa3.19□□□□□ -1.9
CCDC54-201ENST00000261058 LINC01561Q8N1V8 128 aa3.19□□□□□ -1.9
CCDC54-201ENST00000261058 CYB561A3Q8NBI2 242 aa3.19□□□□□ -1.9
CCDC54-201ENST00000261058 TMEM35BQ8NCS4 154 aa3.19□□□□□ -1.9
CCDC54-201ENST00000261058 OR4A4PQ8NGN8 299 aa3.19□□□□□ -1.9
CCDC54-201ENST00000261058 TMEM239Q8WW34 195 aa3.19□□□□□ -1.9
CCDC54-201ENST00000261058 IL1F10Q8WWZ1 152 aa3.19□□□□□ -1.9
CCDC54-201ENST00000261058 MAFIPQ8WZ33 124 aa3.19□□□□□ -1.9
CCDC54-201ENST00000261058 TNRQ92752 1358 aa3.19□□□□□ -1.9
CCDC54-201ENST00000261058 TCEAL4Q96EI5 215 aa3.19□□□□□ -1.9
CCDC54-201ENST00000261058 SMIM10Q96HG1 83 aa3.19□□□□□ -1.9
CCDC54-201ENST00000261058 CPB2Q96IY4 423 aa3.19□□□□□ -1.9
CCDC54-201ENST00000261058 C12orf42Q96LP6 360 aa3.19□□□□□ -1.9
CCDC54-201ENST00000261058 MBOAT4Q96T53 435 aa3.19□□□□□ -1.9
CCDC54-201ENST00000261058 NAPGQ99747 312 aaPredicted RBP3.19□□□□□ -1.9
CCDC54-201ENST00000261058 C7orf50Q9BRJ6 194 aaKnown RBP3.19□□□□□ -1.9
CCDC54-201ENST00000261058 SEC22CQ9BRL7 303 aa3.19□□□□□ -1.9
CCDC54-201ENST00000261058 SLC38A1Q9H2H9 487 aa3.19□□□□□ -1.9
CCDC54-201ENST00000261058 RAB3GAP2Q9H2M9 1393 aa3.19□□□□□ -1.9
CCDC54-201ENST00000261058 PPDPFQ9H3Y8 114 aa3.19□□□□□ -1.9
CCDC54-201ENST00000261058 RHOJQ9H4E5 214 aa3.19□□□□□ -1.9
CCDC54-201ENST00000261058 NIPAL2Q9H841 368 aa3.19□□□□□ -1.9
CCDC54-201ENST00000261058 USP42Q9H9J4 1324 aaKnown RBP3.19□□□□□ -1.9
CCDC54-201ENST00000261058 OR2S2Q9NQN1 319 aa3.19□□□□□ -1.9
CCDC54-201ENST00000261058 XPNPEP1Q9NQW7 623 aa3.19□□□□□ -1.9
CCDC54-201ENST00000261058 CTPS2Q9NRF8 586 aa3.19□□□□□ -1.9
CCDC54-201ENST00000261058 PTTG3PQ9NZH4 202 aa3.19□□□□□ -1.9
CCDC54-201ENST00000261058 WRAP73Q9P2S5 460 aaPredicted RBP3.19□□□□□ -1.9
CCDC54-201ENST00000261058 STOML2Q9UJZ1 356 aa3.19□□□□□ -1.9
CCDC54-201ENST00000261058 C3orf18Q9UK00 162 aa3.19□□□□□ -1.9
CCDC54-201ENST00000261058 MEMO1Q9Y316 297 aa3.19□□□□□ -1.9
CCDC54-201ENST00000261058 FLVCR1Q9Y5Y0 555 aa3.19□□□□□ -1.9
CCDC54-201ENST00000261058 EIF3AQ14152 1382 aaKnown RBP3.19□□□□□ -1.9
CCDC54-201ENST00000261058 USP47Q96K76 1375 aa3.19□□□□□ -1.9
CCDC54-201ENST00000261058 ANKRD30BQ9BXX2 1392 aa3.19□□□□□ -1.9
CCDC54-201ENST00000261058 E9PLD3 99 aa3.19□□□□□ -1.9
CCDC54-201ENST00000261058 F8VP50 259 aa3.19□□□□□ -1.9
CCDC54-201ENST00000261058 M0QZK8 103 aa3.19□□□□□ -1.9
CCDC54-201ENST00000261058 SLC31A2O15432 143 aa3.19□□□□□ -1.9
CCDC54-201ENST00000261058 GMDSO60547 372 aa3.19□□□□□ -1.9
CCDC54-201ENST00000261058 HUS1O60921 280 aa3.19□□□□□ -1.9
CCDC54-201ENST00000261058 ZMPSTE24O75844 475 aa3.19□□□□□ -1.9
CCDC54-201ENST00000261058 SERF1AO75920 110 aa3.19□□□□□ -1.9
CCDC54-201ENST00000261058 IGHV3-23P01764 117 aa3.19□□□□□ -1.9
CCDC54-201ENST00000261058 FAM228BP0C875 321 aa3.19□□□□□ -1.9
CCDC54-201ENST00000261058 MYL2P10916 166 aa3.19□□□□□ -1.9
CCDC54-201ENST00000261058 TCP1P17987 556 aaKnown RBP3.19□□□□□ -1.9
CCDC54-201ENST00000261058 IMPDH1P20839 514 aa3.19□□□□□ -1.9
CCDC54-201ENST00000261058 ATP5A1P25705 553 aaKnown RBP3.19□□□□□ -1.9
CCDC54-201ENST00000261058 S100PP25815 95 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms