RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 IHHQ14623 411 aa11.05□□□□□ -0.64
COL8A1-201ENST00000261037 CTU2Q2VPK5 515 aaKnown RBP11.05□□□□□ -0.64
COL8A1-201ENST00000261037 XKR7Q5GH72 579 aa11.05□□□□□ -0.64
COL8A1-201ENST00000261037 FAAP20Q6NZ36 180 aa11.05□□□□□ -0.64
COL8A1-201ENST00000261037 OR51F2Q8NH61 342 aa11.05□□□□□ -0.64
COL8A1-201ENST00000261037 CMTM2Q8TAZ6 248 aa11.05□□□□□ -0.64
COL8A1-201ENST00000261037 PTDSS2Q9BVG9 487 aa11.05□□□□□ -0.64
COL8A1-201ENST00000261037 CTSFQ9UBX1 484 aa11.05□□□□□ -0.64
COL8A1-201ENST00000261037 A0A0B4J203 849 aa11.04□□□□□ -0.64
COL8A1-201ENST00000261037 GPX2P18283 190 aa11.04□□□□□ -0.64
COL8A1-201ENST00000261037 SNRPGP62308 76 aaKnown RBP11.04□□□□□ -0.64
COL8A1-201ENST00000261037 SRPXP78539 464 aa11.04□□□□□ -0.64
COL8A1-201ENST00000261037 FAM219BQ5XKK7 198 aa11.04□□□□□ -0.64
COL8A1-201ENST00000261037 TDHQ8IZJ6 230 aa11.04□□□□□ -0.64
COL8A1-201ENST00000261037 GCNT2Q8N0V5 402 aa11.04□□□□□ -0.64
COL8A1-201ENST00000261037 UBAC2Q8NBM4 344 aa11.04□□□□□ -0.64
COL8A1-201ENST00000261037 GINS3Q9BRX5 216 aa11.04□□□□□ -0.64
COL8A1-201ENST00000261037 ACER3Q9NUN7 267 aa11.04□□□□□ -0.64
COL8A1-201ENST00000261037 A0A1W2PPH5 198 aa11.04□□□□□ -0.64
COL8A1-201ENST00000261037 IDSB3KWA1 339 aa11.04□□□□□ -0.64
COL8A1-201ENST00000261037 TAGLN2P37802 199 aaKnown RBP11.04□□□□□ -0.64
COL8A1-201ENST00000261037 BAGE3Q86Y29 109 aa11.04□□□□□ -0.64
COL8A1-201ENST00000261037 BAGE2Q86Y30 109 aa11.04□□□□□ -0.64
COL8A1-201ENST00000261037 LYSMD2Q8IV50 215 aa11.04□□□□□ -0.64
COL8A1-201ENST00000261037 TMEM104Q8NE00 496 aa11.04□□□□□ -0.64
COL8A1-201ENST00000261037 OR1M1Q8NGA1 313 aa11.04□□□□□ -0.64
COL8A1-201ENST00000261037 ISL2Q96A47 359 aa11.04□□□□□ -0.64
COL8A1-201ENST00000261037 CCDC74BQ96LY2 380 aa11.04□□□□□ -0.64
COL8A1-201ENST00000261037 RGS11O94810 467 aa11.04□□□□□ -0.64
COL8A1-201ENST00000261037 MLF1P58340 268 aa11.04□□□□□ -0.64
COL8A1-201ENST00000261037 OR52A5Q9H2C5 316 aa11.04□□□□□ -0.64
COL8A1-201ENST00000261037 ASH2LQ9UBL3 628 aa11.04□□□□□ -0.64
COL8A1-201ENST00000261037 C19orf53Q9UNZ5 99 aaPredicted RBP11.04□□□□□ -0.64
COL8A1-201ENST00000261037 URGCP-MRPS24S4R325 110 aa11.04□□□□□ -0.64
COL8A1-201ENST00000261037 MYO10Q9HD67 2058 aa11.04□□□□□ -0.64
COL8A1-201ENST00000261037 GPR171O14626 319 aa11.04□□□□□ -0.64
COL8A1-201ENST00000261037 HBE1P02100 147 aa11.04□□□□□ -0.64
COL8A1-201ENST00000261037 ALOX5APP20292 161 aa11.04□□□□□ -0.64
COL8A1-201ENST00000261037 KIR2DL3P43628 341 aa11.04□□□□□ -0.64
COL8A1-201ENST00000261037 GNB2P62879 340 aa11.04□□□□□ -0.64
COL8A1-201ENST00000261037 ACSM5Q6NUN0 579 aa11.04□□□□□ -0.64
COL8A1-201ENST00000261037 OR10R2Q8NGX6 335 aa11.04□□□□□ -0.64
COL8A1-201ENST00000261037 SLCO4A1Q96BD0 722 aa11.04□□□□□ -0.64
COL8A1-201ENST00000261037 EDEM2Q9BV94 578 aa11.04□□□□□ -0.64
COL8A1-201ENST00000261037 UBE2ZQ9H832 354 aaPredicted RBP11.04□□□□□ -0.64
COL8A1-201ENST00000261037 OR2J2O76002 312 aa11.04□□□□□ -0.64
COL8A1-201ENST00000261037 PMS2P2O95744 297 aa11.04□□□□□ -0.64
COL8A1-201ENST00000261037 CTSLP07711 333 aa11.04□□□□□ -0.64
COL8A1-201ENST00000261037 ACKR1Q16570 336 aa11.04□□□□□ -0.64
COL8A1-201ENST00000261037 RNF141Q8WVD5 230 aa11.04□□□□□ -0.64
COL8A1-201ENST00000261037 ZNF2Q9BSG1 426 aaPredicted RBP11.04□□□□□ -0.64
COL8A1-201ENST00000261037 KCNG2Q9UJ96 466 aa11.04□□□□□ -0.64
COL8A1-201ENST00000261037 OR2W5A6NFC9 320 aa11.03□□□□□ -0.64
COL8A1-201ENST00000261037 TXNDC12O95881 172 aa11.03□□□□□ -0.64
COL8A1-201ENST00000261037 SPI1P17947 270 aa11.03□□□□□ -0.64
COL8A1-201ENST00000261037 TBXA2RP21731 343 aa11.03□□□□□ -0.64
COL8A1-201ENST00000261037 LIPNQ5VXI9 398 aa11.03□□□□□ -0.64
COL8A1-201ENST00000261037 ZNF626Q68DY1 528 aa11.03□□□□□ -0.64
COL8A1-201ENST00000261037 OR10K2Q6IF99 312 aa11.03□□□□□ -0.64
COL8A1-201ENST00000261037 OR2L13Q8N349 312 aa11.03□□□□□ -0.64
COL8A1-201ENST00000261037 SLC43A2Q8N370 569 aa11.03□□□□□ -0.64
COL8A1-201ENST00000261037 OR2G3Q8NGZ4 309 aa11.03□□□□□ -0.64
COL8A1-201ENST00000261037 NANPQ8TBE9 248 aa11.03□□□□□ -0.64
COL8A1-201ENST00000261037 MITD1Q8WV92 249 aa11.03□□□□□ -0.64
COL8A1-201ENST00000261037 C11orf40Q8WZ69 217 aa11.03□□□□□ -0.64
COL8A1-201ENST00000261037 TAF9BQ9HBM6 251 aa11.03□□□□□ -0.64
COL8A1-201ENST00000261037 NPAP1Q9NZP6 1156 aa11.03□□□□□ -0.64
COL8A1-201ENST00000261037 LOXL2Q9Y4K0 774 aa11.03□□□□□ -0.64
COL8A1-201ENST00000261037 LAMB1P07942 1786 aa11.03□□□□□ -0.64
COL8A1-201ENST00000261037 PHIPQ8WWQ0 1821 aa11.03□□□□□ -0.64
COL8A1-201ENST00000261037 HMX2A2RU54 273 aa11.03□□□□□ -0.64
COL8A1-201ENST00000261037 NME2P1O60361 137 aa11.03□□□□□ -0.64
COL8A1-201ENST00000261037 ACHEP22303 614 aa11.03□□□□□ -0.64
COL8A1-201ENST00000261037 PRPH2P23942 346 aa11.03□□□□□ -0.64
COL8A1-201ENST00000261037 OTUD1Q5VV17 481 aaPredicted RBP11.03□□□□□ -0.64
COL8A1-201ENST00000261037 FAM199XQ6PEV8 388 aaPredicted RBP11.03□□□□□ -0.64
COL8A1-201ENST00000261037 OR52I2Q8NH67 350 aa11.03□□□□□ -0.64
COL8A1-201ENST00000261037 BAHD1Q8TBE0 780 aaPredicted RBP11.03□□□□□ -0.64
COL8A1-201ENST00000261037 ARRDC1-AS1Q9H2J1 176 aa11.03□□□□□ -0.64
COL8A1-201ENST00000261037 TNFSF15O95150 251 aa11.03□□□□□ -0.64
COL8A1-201ENST00000261037 SLC19A1P41440 591 aa11.03□□□□□ -0.64
COL8A1-201ENST00000261037 PSMB3P49720 205 aa11.03□□□□□ -0.64
COL8A1-201ENST00000261037 OR10A3P58181 314 aa11.03□□□□□ -0.64
COL8A1-201ENST00000261037 UBE2MP61081 183 aaKnown RBP11.03□□□□□ -0.64
COL8A1-201ENST00000261037 PRAMEF5Q5TYX0 476 aa11.03□□□□□ -0.64
COL8A1-201ENST00000261037 PRAMEF6Q5VXH4 476 aa11.03□□□□□ -0.64
COL8A1-201ENST00000261037 NLRP8Q86W28 1048 aa11.03□□□□□ -0.64
COL8A1-201ENST00000261037 OR10X1Q8NGY0 326 aa11.03□□□□□ -0.64
COL8A1-201ENST00000261037 REEP6Q96HR9 211 aa11.03□□□□□ -0.64
COL8A1-201ENST00000261037 ADAM19Q9H013 955 aa11.03□□□□□ -0.64
COL8A1-201ENST00000261037 SLC22A11Q9NSA0 550 aa11.03□□□□□ -0.64
COL8A1-201ENST00000261037 MED29Q9NX70 200 aa11.03□□□□□ -0.64
COL8A1-201ENST00000261037 ASIC5Q9NY37 505 aa11.03□□□□□ -0.64
COL8A1-201ENST00000261037 GAB2Q9UQC2 676 aa11.03□□□□□ -0.64
COL8A1-201ENST00000261037 SLCO1B1Q9Y6L6 691 aa11.03□□□□□ -0.64
COL8A1-201ENST00000261037 LAMA4Q16363 1823 aa11.03□□□□□ -0.64
COL8A1-201ENST00000261037 CRYM-AS1A6NIL9 109 aa11.03□□□□□ -0.64
COL8A1-201ENST00000261037 GFERP55789 205 aa11.03□□□□□ -0.64
COL8A1-201ENST00000261037 DGCR2P98153 550 aa11.03□□□□□ -0.64
COL8A1-201ENST00000261037 SFT2D1Q8WV19 159 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms