RNA–Protein interactions for RNA: ENST00000261007.9

CHRNA1-201, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNA1, Length 1,980 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-201ENST00000261007 MAGEB1P43366 347 aa9.74□□□□□ -0.85
CHRNA1-201ENST00000261007 AFF3P51826 1226 aaKnown RBP9.74□□□□□ -0.85
CHRNA1-201ENST00000261007 PRPS1P60891 318 aa9.74□□□□□ -0.85
CHRNA1-201ENST00000261007 NAAAQ02083 359 aa9.74□□□□□ -0.85
CHRNA1-201ENST00000261007 TAF13Q15543 124 aa9.74□□□□□ -0.85
CHRNA1-201ENST00000261007 INPP5JQ15735 1006 aaPredicted RBP9.74□□□□□ -0.85
CHRNA1-201ENST00000261007 WBP2NLQ6ICG8 309 aa9.74□□□□□ -0.85
CHRNA1-201ENST00000261007 RAB12Q6IQ22 244 aa9.74□□□□□ -0.85
CHRNA1-201ENST00000261007 H3F3CQ6NXT2 135 aa9.74□□□□□ -0.85
CHRNA1-201ENST00000261007 IL34Q6ZMJ4 242 aa9.74□□□□□ -0.85
CHRNA1-201ENST00000261007 SLC16A9Q7RTY1 509 aa9.74□□□□□ -0.85
CHRNA1-201ENST00000261007 GTPBP8Q8N3Z3 284 aaPredicted RBP9.74□□□□□ -0.85
CHRNA1-201ENST00000261007 PTCHD1Q96NR3 888 aa9.74□□□□□ -0.85
CHRNA1-201ENST00000261007 TSPAN10Q9H1Z9 355 aaPredicted RBP9.74□□□□□ -0.85
CHRNA1-201ENST00000261007 RNF122Q9H9V4 155 aa9.74□□□□□ -0.85
CHRNA1-201ENST00000261007 MMP26Q9NRE1 261 aa9.74□□□□□ -0.85
CHRNA1-201ENST00000261007 LANCL2Q9NS86 450 aa9.74□□□□□ -0.85
CHRNA1-201ENST00000261007 RXFP3Q9NSD7 469 aa9.74□□□□□ -0.85
CHRNA1-201ENST00000261007 ZNF230Q9UIE0 474 aaPredicted RBP9.74□□□□□ -0.85
CHRNA1-201ENST00000261007 EDARQ9UNE0 448 aa9.74□□□□□ -0.85
CHRNA1-201ENST00000261007 THADAQ6YHU6 1953 aa9.73□□□□□ -0.85
CHRNA1-201ENST00000261007 IGHV1OR21-1A0A087WYE8 117 aa9.73□□□□□ -0.85
CHRNA1-201ENST00000261007 A0A1W2PPC1 479 aa9.73□□□□□ -0.85
CHRNA1-201ENST00000261007 HSPB2A8KAH6 182 aa9.73□□□□□ -0.85
CHRNA1-201ENST00000261007 RAB3DO95716 219 aa9.73□□□□□ -0.85
CHRNA1-201ENST00000261007 S100A9P06702 114 aaKnown RBP9.73□□□□□ -0.85
CHRNA1-201ENST00000261007 FABP1P07148 127 aa9.73□□□□□ -0.85
CHRNA1-201ENST00000261007 ACAA1P09110 424 aaPredicted RBP9.73□□□□□ -0.85
CHRNA1-201ENST00000261007 SLC6A8P48029 635 aa9.73□□□□□ -0.85
CHRNA1-201ENST00000261007 KCNJ3P48549 501 aa9.73□□□□□ -0.85
CHRNA1-201ENST00000261007 SLC25A1P53007 311 aa9.73□□□□□ -0.85
CHRNA1-201ENST00000261007 RAB5BP61020 215 aa9.73□□□□□ -0.85
CHRNA1-201ENST00000261007 ERV3-1Q14264 604 aa9.73□□□□□ -0.85
CHRNA1-201ENST00000261007 ELAVL1Q15717 326 aaKnown RBP9.73□□□□□ -0.85
CHRNA1-201ENST00000261007 HSPB2Q16082 182 aa9.73□□□□□ -0.85
CHRNA1-201ENST00000261007 IGSF11Q5DX21 431 aa9.73□□□□□ -0.85
CHRNA1-201ENST00000261007 NKAPLQ5M9Q1 402 aa9.73□□□□□ -0.85
CHRNA1-201ENST00000261007 PTCRAQ6ISU1 281 aaPredicted RBP9.73□□□□□ -0.85
CHRNA1-201ENST00000261007 KIRREL2Q6UWL6 708 aa9.73□□□□□ -0.85
CHRNA1-201ENST00000261007 TMEM151BQ8IW70 566 aa9.73□□□□□ -0.85
CHRNA1-201ENST00000261007 SHISA5Q8N114 240 aa9.73□□□□□ -0.85
CHRNA1-201ENST00000261007 D2HGDHQ8N465 521 aa9.73□□□□□ -0.85
CHRNA1-201ENST00000261007 INO80EQ8NBZ0 244 aaPredicted RBP9.73□□□□□ -0.85
CHRNA1-201ENST00000261007 RNF141Q8WVD5 230 aa9.73□□□□□ -0.85
CHRNA1-201ENST00000261007 ZNRF4Q8WWF5 429 aa9.73□□□□□ -0.85
CHRNA1-201ENST00000261007 CLDN23Q96B33 292 aa9.73□□□□□ -0.85
CHRNA1-201ENST00000261007 CMSS1Q9BQ75 279 aaKnown RBP9.73□□□□□ -0.85
CHRNA1-201ENST00000261007 PTDSS2Q9BVG9 487 aa9.73□□□□□ -0.85
CHRNA1-201ENST00000261007 DUSP15Q9H1R2 295 aaPredicted RBP9.73□□□□□ -0.85
CHRNA1-201ENST00000261007 FRRS1LQ9P0K9 344 aa9.73□□□□□ -0.85
CHRNA1-201ENST00000261007 DTX4Q9Y2E6 619 aa9.73□□□□□ -0.85
CHRNA1-201ENST00000261007 CEP290O15078 2479 aa9.73□□□□□ -0.85
CHRNA1-201ENST00000261007 IGKV3D-11A0A0A0MRZ8 115 aa9.72□□□□□ -0.85
CHRNA1-201ENST00000261007 MEX3AA1L020 520 aaKnown RBP9.72□□□□□ -0.85
CHRNA1-201ENST00000261007 OR2AT4A6NND4 320 aa9.72□□□□□ -0.85
CHRNA1-201ENST00000261007 LINC00587B1AMM8 73 aa9.72□□□□□ -0.85
CHRNA1-201ENST00000261007 MCIDASD6RGH6 385 aa9.72□□□□□ -0.85
CHRNA1-201ENST00000261007 F5H0A9 414 aaPredicted RBP9.72□□□□□ -0.85
CHRNA1-201ENST00000261007 H3BMH7 237 aa9.72□□□□□ -0.85
CHRNA1-201ENST00000261007 HRKO00198 91 aa9.72□□□□□ -0.85
CHRNA1-201ENST00000261007 BCAT2O15382 392 aaPredicted RBP9.72□□□□□ -0.85
CHRNA1-201ENST00000261007 CLPSP04118 112 aa9.72□□□□□ -0.85
CHRNA1-201ENST00000261007 NGFRP08138 427 aa9.72□□□□□ -0.85
CHRNA1-201ENST00000261007 SLC37A1P57057 533 aa9.72□□□□□ -0.85
CHRNA1-201ENST00000261007 GUCA2AQ02747 115 aa9.72□□□□□ -0.85
CHRNA1-201ENST00000261007 PLA2G7Q13093 441 aa9.72□□□□□ -0.85
CHRNA1-201ENST00000261007 PDZK1IP1Q13113 114 aa9.72□□□□□ -0.85
CHRNA1-201ENST00000261007 PNLIPRP3Q17RR3 467 aa9.72□□□□□ -0.85
CHRNA1-201ENST00000261007 FAM209BQ5JX69 171 aa9.72□□□□□ -0.85
CHRNA1-201ENST00000261007 LINC01590Q5TEZ4 76 aa9.72□□□□□ -0.85
CHRNA1-201ENST00000261007 CHRDL2Q6WN34 429 aa9.72□□□□□ -0.85
CHRNA1-201ENST00000261007 SLC30A7Q8NEW0 376 aa9.72□□□□□ -0.85
CHRNA1-201ENST00000261007 OR5AP2Q8NGF4 316 aa9.72□□□□□ -0.85
CHRNA1-201ENST00000261007 OR6K6Q8NGW6 343 aa9.72□□□□□ -0.85
CHRNA1-201ENST00000261007 RXFP4Q8TDU9 374 aa9.72□□□□□ -0.85
CHRNA1-201ENST00000261007 GPR148Q8TDV2 347 aa9.72□□□□□ -0.85
CHRNA1-201ENST00000261007 LIPHQ8WWY8 451 aa9.72□□□□□ -0.85
CHRNA1-201ENST00000261007 DAZLQ92904 295 aaKnown RBP9.72□□□□□ -0.85
CHRNA1-201ENST00000261007 SLC41A2Q96JW4 573 aa9.72□□□□□ -0.85
CHRNA1-201ENST00000261007 GPX7Q96SL4 187 aaPredicted RBP9.72□□□□□ -0.85
CHRNA1-201ENST00000261007 NMNAT3Q96T66 252 aa9.72□□□□□ -0.85
CHRNA1-201ENST00000261007 MNTQ99583 582 aa9.72□□□□□ -0.85
CHRNA1-201ENST00000261007 FOXQ1Q9C009 403 aa9.72□□□□□ -0.85
CHRNA1-201ENST00000261007 EGLN1Q9GZT9 426 aa9.72□□□□□ -0.85
CHRNA1-201ENST00000261007 COMMD4Q9H0A8 199 aa9.72□□□□□ -0.85
CHRNA1-201ENST00000261007 TLNRD1Q9H1K6 362 aa9.72□□□□□ -0.85
CHRNA1-201ENST00000261007 FKRPQ9H9S5 495 aa9.72□□□□□ -0.85
CHRNA1-201ENST00000261007 PLEKHA6Q9Y2H5 1048 aa9.72□□□□□ -0.85
CHRNA1-201ENST00000261007 TRAV8-7A0A075B6U6 113 aa9.72□□□□□ -0.85
CHRNA1-201ENST00000261007 LOC100289279A0A1B0GTE1 492 aa9.72□□□□□ -0.85
CHRNA1-201ENST00000261007 ELOA3DA6NLF2 546 aaPredicted RBP9.72□□□□□ -0.85
CHRNA1-201ENST00000261007 OR6C76A6NM76 312 aa9.72□□□□□ -0.85
CHRNA1-201ENST00000261007 TMEM212A6NML5 194 aa9.72□□□□□ -0.85
CHRNA1-201ENST00000261007 OR4C45A6NMZ5 311 aa9.72□□□□□ -0.85
CHRNA1-201ENST00000261007 PRR32B1ATL7 298 aa9.72□□□□□ -0.85
CHRNA1-201ENST00000261007 TOX3O15405 576 aaPredicted RBP9.72□□□□□ -0.85
CHRNA1-201ENST00000261007 ABHD16AO95870 558 aa9.72□□□□□ -0.85
CHRNA1-201ENST00000261007 MAS1P04201 325 aa9.72□□□□□ -0.85
CHRNA1-201ENST00000261007 CD74P04233 296 aa9.72□□□□□ -0.85
CHRNA1-201ENST00000261007 TPT1P13693 172 aaKnown RBP9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms