RNA–Protein interactions for RNA: ENST00000260327.8

CTDSPL2-201, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 6,828 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-201ENST00000260327 BMPR1AP36894 532 aa8.92□□□□□ -0.98
CTDSPL2-201ENST00000260327 ATP1B3P54709 279 aa8.92□□□□□ -0.98
CTDSPL2-201ENST00000260327 COL13A1Q5TAT6 717 aaPredicted RBP8.92□□□□□ -0.98
CTDSPL2-201ENST00000260327 CYHR1Q6ZMK1 362 aa8.92□□□□□ -0.98
CTDSPL2-201ENST00000260327 SIGLECL1Q8N7X8 197 aa8.92□□□□□ -0.98
CTDSPL2-201ENST00000260327 KIAA1958Q8N8K9 716 aa8.92□□□□□ -0.98
CTDSPL2-201ENST00000260327 BADQ92934 168 aa8.92□□□□□ -0.98
CTDSPL2-201ENST00000260327 EVA1AQ9H8M9 152 aa8.92□□□□□ -0.98
CTDSPL2-201ENST00000260327 ASCC3Q8N3C0 2202 aaKnown RBP8.92□□□□□ -0.98
CTDSPL2-201ENST00000260327 RAB27BO00194 218 aa8.92□□□□□ -0.98
CTDSPL2-201ENST00000260327 RGS13O14921 159 aa8.92□□□□□ -0.98
CTDSPL2-201ENST00000260327 DSCR3O14972 297 aa8.92□□□□□ -0.98
CTDSPL2-201ENST00000260327 SIGLEC6O43699 453 aa8.92□□□□□ -0.98
CTDSPL2-201ENST00000260327 DUX1O43812 170 aa8.92□□□□□ -0.98
CTDSPL2-201ENST00000260327 F11P03951 625 aa8.92□□□□□ -0.98
CTDSPL2-201ENST00000260327 SNCAP37840 140 aa8.92□□□□□ -0.98
CTDSPL2-201ENST00000260327 RPS27P42677 84 aaKnown RBP8.92□□□□□ -0.98
CTDSPL2-201ENST00000260327 RPL29P47914 159 aaKnown RBP8.92□□□□□ -0.98
CTDSPL2-201ENST00000260327 SLC6A12P48065 614 aa8.92□□□□□ -0.98
CTDSPL2-201ENST00000260327 MARCH1Q8TCQ1 289 aa8.92□□□□□ -0.98
CTDSPL2-201ENST00000260327 BTF3L4Q96K17 158 aa8.92□□□□□ -0.98
CTDSPL2-201ENST00000260327 PLEKHB1Q9UF11 243 aaPredicted RBP8.92□□□□□ -0.98
CTDSPL2-201ENST00000260327 LOC102724200A0A096LPH7 203 aaPredicted RBP8.92□□□□□ -0.98
CTDSPL2-201ENST00000260327 MED19A0JLT2 244 aaPredicted RBP8.92□□□□□ -0.98
CTDSPL2-201ENST00000260327 IFITM5A6NNB3 132 aa8.92□□□□□ -0.98
CTDSPL2-201ENST00000260327 GFYI3L273 518 aa8.92□□□□□ -0.98
CTDSPL2-201ENST00000260327 GLDNQ6ZMI3 551 aaPredicted RBP8.92□□□□□ -0.98
CTDSPL2-201ENST00000260327 DPY19L2P2Q6ZN68 376 aa8.92□□□□□ -0.98
CTDSPL2-201ENST00000260327 OR4F5Q8NH21 305 aa8.92□□□□□ -0.98
CTDSPL2-201ENST00000260327 OR4F4Q96R69 305 aa8.92□□□□□ -0.98
CTDSPL2-201ENST00000260327 UBQLN4Q9NRR5 601 aa8.92□□□□□ -0.98
CTDSPL2-201ENST00000260327 SH3BGRL2Q9UJC5 107 aa8.92□□□□□ -0.98
CTDSPL2-201ENST00000260327 MEIKINA0A087WXM9 373 aa8.92□□□□□ -0.98
CTDSPL2-201ENST00000260327 GLCEO94923 617 aa8.92□□□□□ -0.98
CTDSPL2-201ENST00000260327 AVPR2P30518 371 aa8.92□□□□□ -0.98
CTDSPL2-201ENST00000260327 CALCRP30988 508 aa8.92□□□□□ -0.98
CTDSPL2-201ENST00000260327 MSMO1Q15800 293 aa8.92□□□□□ -0.98
CTDSPL2-201ENST00000260327 SLC48A1Q6P1K1 146 aa8.92□□□□□ -0.98
CTDSPL2-201ENST00000260327 TMEM64Q6YI46 380 aa8.92□□□□□ -0.98
CTDSPL2-201ENST00000260327 LGI3Q8N145 548 aa8.92□□□□□ -0.98
CTDSPL2-201ENST00000260327 ADAMTS18Q8TE60 1221 aa8.92□□□□□ -0.98
CTDSPL2-201ENST00000260327 PSMF1Q92530 271 aa8.92□□□□□ -0.98
CTDSPL2-201ENST00000260327 LRFN5Q96NI6 719 aa8.92□□□□□ -0.98
CTDSPL2-201ENST00000260327 MTCH1Q9NZJ7 389 aa8.92□□□□□ -0.98
CTDSPL2-201ENST00000260327 CLCF1Q9UBD9 225 aa8.92□□□□□ -0.98
CTDSPL2-201ENST00000260327 MIOXQ9UGB7 285 aa8.92□□□□□ -0.98
CTDSPL2-201ENST00000260327 B3GALT5Q9Y2C3 310 aa8.92□□□□□ -0.98
CTDSPL2-201ENST00000260327 PEX12O00623 359 aa8.91□□□□□ -0.98
CTDSPL2-201ENST00000260327 SUSD5O60279 629 aa8.91□□□□□ -0.98
CTDSPL2-201ENST00000260327 PCMT1P22061 227 aa8.91□□□□□ -0.98
CTDSPL2-201ENST00000260327 HRH1P35367 487 aa8.91□□□□□ -0.98
CTDSPL2-201ENST00000260327 DMBX1Q8NFW5 382 aa8.91□□□□□ -0.98
CTDSPL2-201ENST00000260327 C1orf198Q9H425 327 aa8.91□□□□□ -0.98
CTDSPL2-201ENST00000260327 SIPA1L3O60292 1781 aaPredicted RBP8.91□□□□□ -0.98
CTDSPL2-201ENST00000260327 TCAPO15273 167 aa8.91□□□□□ -0.98
CTDSPL2-201ENST00000260327 ST8SIA3O43173 380 aa8.91□□□□□ -0.98
CTDSPL2-201ENST00000260327 ANGPTL7O43827 346 aa8.91□□□□□ -0.98
CTDSPL2-201ENST00000260327 FGF7P21781 194 aa8.91□□□□□ -0.98
CTDSPL2-201ENST00000260327 ZNF90Q03938 601 aa8.91□□□□□ -0.98
CTDSPL2-201ENST00000260327 C9orf135Q5VTT2 229 aa8.91□□□□□ -0.98
CTDSPL2-201ENST00000260327 OR6S1Q8NH40 331 aa8.91□□□□□ -0.98
CTDSPL2-201ENST00000260327 PHYHIPQ92561 330 aa8.91□□□□□ -0.98
CTDSPL2-201ENST00000260327 TSSK2Q96PF2 358 aa8.91□□□□□ -0.98
CTDSPL2-201ENST00000260327 SPACA5Q96QH8 159 aa8.91□□□□□ -0.98
CTDSPL2-201ENST00000260327 PLA2G12AQ9BZM1 189 aa8.91□□□□□ -0.98
CTDSPL2-201ENST00000260327 TRAPPC2LH3BP13 241 aa8.91□□□□□ -0.98
CTDSPL2-201ENST00000260327 SSSCA1O60232 199 aa8.91□□□□□ -0.98
CTDSPL2-201ENST00000260327 RRASP10301 218 aa8.91□□□□□ -0.98
CTDSPL2-201ENST00000260327 NKX2-1P43699 371 aaPredicted RBP8.91□□□□□ -0.98
CTDSPL2-201ENST00000260327 NPSR1Q6W5P4 371 aa8.91□□□□□ -0.98
CTDSPL2-201ENST00000260327 RTN4RL1Q86UN2 441 aaPredicted RBP8.91□□□□□ -0.98
CTDSPL2-201ENST00000260327 MEGF10Q96KG7 1140 aa8.91□□□□□ -0.98
CTDSPL2-201ENST00000260327 ENKD1Q9H0I2 346 aa8.91□□□□□ -0.98
CTDSPL2-201ENST00000260327 NKX2-4Q9H2Z4 354 aa8.91□□□□□ -0.98
CTDSPL2-201ENST00000260327 OR51I2Q9H344 312 aa8.91□□□□□ -0.98
CTDSPL2-201ENST00000260327 XRCC2O43543 280 aa8.91□□□□□ -0.98
CTDSPL2-201ENST00000260327 HIST1H1CP16403 213 aaKnown RBP8.91□□□□□ -0.98
CTDSPL2-201ENST00000260327 OR1D4P47884 311 aa8.91□□□□□ -0.98
CTDSPL2-201ENST00000260327 MFSD12Q6NUT3 480 aa8.91□□□□□ -0.98
CTDSPL2-201ENST00000260327 ABHD17CQ6PCB6 329 aa8.91□□□□□ -0.98
CTDSPL2-201ENST00000260327 TOMM20LQ6UXN7 152 aa8.91□□□□□ -0.98
CTDSPL2-201ENST00000260327 DCXRQ7Z4W1 244 aa8.91□□□□□ -0.98
CTDSPL2-201ENST00000260327 MKXQ8IYA7 352 aa8.91□□□□□ -0.98
CTDSPL2-201ENST00000260327 OR5L2Q8NGL0 311 aa8.91□□□□□ -0.98
CTDSPL2-201ENST00000260327 STT3BQ8TCJ2 826 aa8.91□□□□□ -0.98
CTDSPL2-201ENST00000260327 CMBLQ96DG6 245 aa8.91□□□□□ -0.98
CTDSPL2-201ENST00000260327 ZNF2Q9BSG1 426 aaPredicted RBP8.91□□□□□ -0.98
CTDSPL2-201ENST00000260327 DNMT3BQ9UBC3 853 aaKnown RBP8.91□□□□□ -0.98
CTDSPL2-201ENST00000260327 ENTPD2Q9Y5L3 495 aa8.91□□□□□ -0.98
CTDSPL2-201ENST00000260327 FTCDNL1E5RQL4 147 aa8.91□□□□□ -0.98
CTDSPL2-201ENST00000260327 YKT6O15498 198 aa8.91□□□□□ -0.98
CTDSPL2-201ENST00000260327 IGHG1P01857 330 aa8.91□□□□□ -0.98
CTDSPL2-201ENST00000260327 MPGP29372 298 aa8.91□□□□□ -0.98
CTDSPL2-201ENST00000260327 CRYBB2P43320 205 aa8.91□□□□□ -0.98
CTDSPL2-201ENST00000260327 RABIFP47224 123 aa8.91□□□□□ -0.98
CTDSPL2-201ENST00000260327 SELENOPP49908 381 aa8.91□□□□□ -0.98
CTDSPL2-201ENST00000260327 LIM2P55344 173 aa8.91□□□□□ -0.98
CTDSPL2-201ENST00000260327 SSX1Q16384 188 aa8.91□□□□□ -0.98
CTDSPL2-201ENST00000260327 DUSP5Q16690 384 aa8.91□□□□□ -0.98
CTDSPL2-201ENST00000260327 MOGAT2Q3SYC2 334 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms