RNA–Protein interactions for RNA: ENST00000258349.8

RC3H1-201, Transcript of ring finger and CCCH-type domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RC3H1, Length 10,988 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-201ENST00000258349 TGIF2Q9GZN2 237 aa4.41□□□□□ -1.7
RC3H1-201ENST00000258349 RIMS4Q9H426 269 aaPredicted RBP4.41□□□□□ -1.7
RC3H1-201ENST00000258349 PLEKHA2Q9HB19 425 aa4.41□□□□□ -1.7
RC3H1-201ENST00000258349 SPACA1Q9HBV2 294 aa4.41□□□□□ -1.7
RC3H1-201ENST00000258349 DNMT3BQ9UBC3 853 aaKnown RBP4.41□□□□□ -1.7
RC3H1-201ENST00000258349 MED16Q9Y2X0 877 aa4.41□□□□□ -1.7
RC3H1-201ENST00000258349 ZNF891A8MT65 544 aaPredicted RBP4.41□□□□□ -1.7
RC3H1-201ENST00000258349 YY2O15391 372 aa4.41□□□□□ -1.7
RC3H1-201ENST00000258349 GLAP06280 429 aa4.41□□□□□ -1.7
RC3H1-201ENST00000258349 SHC1P29353 583 aa4.41□□□□□ -1.7
RC3H1-201ENST00000258349 RPUSD3Q6P087 351 aaKnown RBP4.41□□□□□ -1.7
RC3H1-201ENST00000258349 SLCO4C1Q6ZQN7 724 aa4.41□□□□□ -1.7
RC3H1-201ENST00000258349 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.41□□□□□ -1.7
RC3H1-201ENST00000258349 DVL3Q92997 716 aaPredicted RBP4.41□□□□□ -1.7
RC3H1-201ENST00000258349 TOE1Q96GM8 510 aaKnown RBP4.41□□□□□ -1.7
RC3H1-201ENST00000258349 ZNF583Q96ND8 569 aa4.41□□□□□ -1.7
RC3H1-201ENST00000258349 CHST11Q9NPF2 352 aa4.41□□□□□ -1.7
RC3H1-201ENST00000258349 SSUH2Q9Y2M2 353 aa4.41□□□□□ -1.7
RC3H1-201ENST00000258349 NOTCH3Q9UM47 2321 aa4.41□□□□□ -1.7
RC3H1-201ENST00000258349 OBSL1O75147 1896 aa4.41□□□□□ -1.7
RC3H1-201ENST00000258349 A0A0A6YYC8 382 aaPredicted RBP4.41□□□□□ -1.7
RC3H1-201ENST00000258349 I3L1I5 382 aaPredicted RBP4.41□□□□□ -1.7
RC3H1-201ENST00000258349 LGI1O95970 557 aa4.41□□□□□ -1.7
RC3H1-201ENST00000258349 CHRM2P08172 466 aa4.41□□□□□ -1.7
RC3H1-201ENST00000258349 CSF3P09919 207 aa4.41□□□□□ -1.7
RC3H1-201ENST00000258349 OR13C7P0DN81 318 aa4.41□□□□□ -1.7
RC3H1-201ENST00000258349 CLDN2P57739 230 aa4.41□□□□□ -1.7
RC3H1-201ENST00000258349 MOGAT2Q3SYC2 334 aa4.41□□□□□ -1.7
RC3H1-201ENST00000258349 RNF212Q495C1 297 aa4.41□□□□□ -1.7
RC3H1-201ENST00000258349 OR8G2PQ6IF36 304 aa4.41□□□□□ -1.7
RC3H1-201ENST00000258349 COMMD1Q8N668 190 aa4.41□□□□□ -1.7
RC3H1-201ENST00000258349 LMNTD1Q8N9Z9 388 aa4.41□□□□□ -1.7
RC3H1-201ENST00000258349 PLPP7Q8NBV4 271 aa4.41□□□□□ -1.7
RC3H1-201ENST00000258349 NLGN4YQ8NFZ3 816 aaPredicted RBP4.41□□□□□ -1.7
RC3H1-201ENST00000258349 DDOQ99489 341 aa4.41□□□□□ -1.7
RC3H1-201ENST00000258349 GINS3Q9BRX5 216 aa4.41□□□□□ -1.7
RC3H1-201ENST00000258349 EML6Q6ZMW3 1958 aa4.41□□□□□ -1.7
RC3H1-201ENST00000258349 SLC5A10A0PJK1 596 aa4.41□□□□□ -1.7
RC3H1-201ENST00000258349 CT45A10P0DMU9 189 aa4.41□□□□□ -1.7
RC3H1-201ENST00000258349 PTAFRP25105 342 aa4.41□□□□□ -1.7
RC3H1-201ENST00000258349 HSF1Q00613 529 aa4.41□□□□□ -1.7
RC3H1-201ENST00000258349 SEMA3BQ13214 749 aa4.41□□□□□ -1.7
RC3H1-201ENST00000258349 KIAA0141Q14154 515 aaPredicted RBP4.41□□□□□ -1.7
RC3H1-201ENST00000258349 LYSMD4Q5XG99 296 aa4.41□□□□□ -1.7
RC3H1-201ENST00000258349 NLRC3Q7RTR2 1065 aa4.41□□□□□ -1.7
RC3H1-201ENST00000258349 SLC25A43Q8WUT9 341 aaPredicted RBP4.41□□□□□ -1.7
RC3H1-201ENST00000258349 CIB3Q96Q77 187 aaPredicted RBP4.41□□□□□ -1.7
RC3H1-201ENST00000258349 GNB4Q9HAV0 340 aa4.41□□□□□ -1.7
RC3H1-201ENST00000258349 NIT2Q9NQR4 276 aa4.41□□□□□ -1.7
RC3H1-201ENST00000258349 TM7SF3Q9NS93 570 aa4.41□□□□□ -1.7
RC3H1-201ENST00000258349 LAMP3Q9UQV4 416 aa4.41□□□□□ -1.7
RC3H1-201ENST00000258349 NOSIPQ9Y314 301 aaKnown RBP4.41□□□□□ -1.7
RC3H1-201ENST00000258349 TMED7-TICAM2A0A0A6YYA0 188 aa4.41□□□□□ -1.7
RC3H1-201ENST00000258349 TLCD2A6NGC4 264 aa4.41□□□□□ -1.7
RC3H1-201ENST00000258349 OR6C76A6NM76 312 aa4.41□□□□□ -1.7
RC3H1-201ENST00000258349 GPR171O14626 319 aa4.41□□□□□ -1.7
RC3H1-201ENST00000258349 RPL13AP40429 203 aaKnown RBP4.41□□□□□ -1.7
RC3H1-201ENST00000258349 TAS2R45P59539 299 aa4.41□□□□□ -1.7
RC3H1-201ENST00000258349 EXT1Q16394 746 aa4.41□□□□□ -1.7
RC3H1-201ENST00000258349 XKR7Q5GH72 579 aa4.41□□□□□ -1.7
RC3H1-201ENST00000258349 OR1M1Q8NGA1 313 aa4.41□□□□□ -1.7
RC3H1-201ENST00000258349 OR5M8Q8NGP6 311 aa4.41□□□□□ -1.7
RC3H1-201ENST00000258349 GPX8Q8TED1 209 aa4.41□□□□□ -1.7
RC3H1-201ENST00000258349 RASD2Q96D21 266 aa4.41□□□□□ -1.7
RC3H1-201ENST00000258349 DUS3LQ96G46 650 aaKnown RBP4.41□□□□□ -1.7
RC3H1-201ENST00000258349 BOD1Q96IK1 185 aa4.41□□□□□ -1.7
RC3H1-201ENST00000258349 NMNAT3Q96T66 252 aa4.41□□□□□ -1.7
RC3H1-201ENST00000258349 CHRDL1Q9BU40 450 aa4.41□□□□□ -1.7
RC3H1-201ENST00000258349 ERVMER34-1Q9H9K5 563 aa4.41□□□□□ -1.7
RC3H1-201ENST00000258349 CD207Q9UJ71 328 aa4.41□□□□□ -1.7
RC3H1-201ENST00000258349 TMED7Q9Y3B3 224 aa4.41□□□□□ -1.7
RC3H1-201ENST00000258349 V9GYS6 101 aa4.41□□□□□ -1.7
RC3H1-201ENST00000258349 NCOR1O75376 2440 aa4.41□□□□□ -1.7
RC3H1-201ENST00000258349 TRAV1-2A0A0B4J238 106 aa4.41□□□□□ -1.7
RC3H1-201ENST00000258349 DCTN6O00399 190 aa4.41□□□□□ -1.7
RC3H1-201ENST00000258349 CHEK1O14757 476 aa4.41□□□□□ -1.7
RC3H1-201ENST00000258349 PLXNB1O43157 2135 aa4.41□□□□□ -1.7
RC3H1-201ENST00000258349 GJB3O75712 270 aa4.41□□□□□ -1.7
RC3H1-201ENST00000258349 CPN1P15169 458 aa4.41□□□□□ -1.7
RC3H1-201ENST00000258349 GLB1P16278 677 aa4.41□□□□□ -1.7
RC3H1-201ENST00000258349 RPS19P39019 145 aaKnown RBP4.41□□□□□ -1.7
RC3H1-201ENST00000258349 GABRA4P48169 554 aa4.41□□□□□ -1.7
RC3H1-201ENST00000258349 CLDN12P56749 244 aa4.41□□□□□ -1.7
RC3H1-201ENST00000258349 MRPS21P82921 87 aaKnown RBP4.41□□□□□ -1.7
RC3H1-201ENST00000258349 ZNF239Q16600 458 aaKnown RBP4.41□□□□□ -1.7
RC3H1-201ENST00000258349 OR5M10Q6IEU7 315 aa4.41□□□□□ -1.7
RC3H1-201ENST00000258349 GLIPR1L1Q6UWM5 242 aa4.41□□□□□ -1.7
RC3H1-201ENST00000258349 TMEM64Q6YI46 380 aa4.41□□□□□ -1.7
RC3H1-201ENST00000258349 OR8U1Q8NH10 309 aa4.41□□□□□ -1.7
RC3H1-201ENST00000258349 TM4SF18Q96CE8 201 aa4.41□□□□□ -1.7
RC3H1-201ENST00000258349 CXorf58Q96LI9 332 aa4.41□□□□□ -1.7
RC3H1-201ENST00000258349 OR5M11Q96RB7 305 aa4.41□□□□□ -1.7
RC3H1-201ENST00000258349 C12orf57Q99622 126 aa4.41□□□□□ -1.7
RC3H1-201ENST00000258349 TPPP3Q9BW30 176 aa4.41□□□□□ -1.7
RC3H1-201ENST00000258349 SPNS1Q9H2V7 528 aa4.41□□□□□ -1.7
RC3H1-201ENST00000258349 PLK3Q9H4B4 646 aa4.41□□□□□ -1.7
RC3H1-201ENST00000258349 CXorf36Q9H7Y0 433 aa4.41□□□□□ -1.7
RC3H1-201ENST00000258349 MMP26Q9NRE1 261 aa4.41□□□□□ -1.7
RC3H1-201ENST00000258349 G3V3Q6 166 aa4.4□□□□□ -1.7
RC3H1-201ENST00000258349 DOK2O60496 412 aa4.4□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms