RNA–Protein interactions for RNA: ENST00000252444.9

LDLR-201, Transcript of low density lipoprotein receptor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene LDLR, Length 5,337 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-201ENST00000252444 OR8G1Q15617 311 aa12.3□□□□□ -0.44
LDLR-201ENST00000252444 PNLIPRP3Q17RR3 467 aa12.3□□□□□ -0.44
LDLR-201ENST00000252444 PCGF3Q3KNV8 242 aa12.3□□□□□ -0.44
LDLR-201ENST00000252444 OR1F12Q8NHA8 337 aa12.3□□□□□ -0.44
LDLR-201ENST00000252444 DCDC2BA2VCK2 349 aa12.3□□□□□ -0.44
LDLR-201ENST00000252444 LIPT2A6NK58 231 aa12.3□□□□□ -0.44
LDLR-201ENST00000252444 CCL4P13236 92 aa12.3□□□□□ -0.44
LDLR-201ENST00000252444 C21orf33P30042 268 aaPredicted RBP12.3□□□□□ -0.44
LDLR-201ENST00000252444 AMER3Q8N944 861 aa12.3□□□□□ -0.44
LDLR-201ENST00000252444 OR2M7Q8NG81 312 aa12.3□□□□□ -0.44
LDLR-201ENST00000252444 RAB3CQ96E17 227 aa12.3□□□□□ -0.44
LDLR-201ENST00000252444 OCSTAMPQ9BR26 566 aa12.3□□□□□ -0.44
LDLR-201ENST00000252444 PIGLQ9Y2B2 252 aa12.3□□□□□ -0.44
LDLR-201ENST00000252444 SLC33A1O00400 549 aaPredicted RBP12.3□□□□□ -0.44
LDLR-201ENST00000252444 GPR137BO60478 399 aa12.3□□□□□ -0.44
LDLR-201ENST00000252444 GFRA3O60609 400 aa12.3□□□□□ -0.44
LDLR-201ENST00000252444 SELENOFO60613 162 aa12.3□□□□□ -0.44
LDLR-201ENST00000252444 TSPAN2O60636 221 aa12.3□□□□□ -0.44
LDLR-201ENST00000252444 ACSM1Q08AH1 577 aa12.3□□□□□ -0.44
LDLR-201ENST00000252444 C6orf183Q5T699 404 aa12.3□□□□□ -0.44
LDLR-201ENST00000252444 TRILQ7L0X0 811 aa12.3□□□□□ -0.44
LDLR-201ENST00000252444 OR6V1Q8N148 313 aa12.3□□□□□ -0.44
LDLR-201ENST00000252444 PHOX2BQ99453 314 aa12.3□□□□□ -0.44
LDLR-201ENST00000252444 GDF2Q9UK05 429 aaPredicted RBP12.3□□□□□ -0.44
LDLR-201ENST00000252444 TNFRSF1AP19438 455 aa12.29□□□□□ -0.44
LDLR-201ENST00000252444 RPS4Y1P22090 263 aaKnown RBP12.29□□□□□ -0.44
LDLR-201ENST00000252444 CD34P28906 385 aa12.29□□□□□ -0.44
LDLR-201ENST00000252444 GZMMP51124 257 aa12.29□□□□□ -0.44
LDLR-201ENST00000252444 ARF1P84077 181 aaKnown RBP12.29□□□□□ -0.44
LDLR-201ENST00000252444 ACSM5Q6NUN0 579 aa12.29□□□□□ -0.44
LDLR-201ENST00000252444 ASB10Q8WXI3 467 aa12.29□□□□□ -0.44
LDLR-201ENST00000252444 MIB2Q96AX9 1013 aa12.29□□□□□ -0.44
LDLR-201ENST00000252444 THAP7Q9BT49 309 aaPredicted RBP12.29□□□□□ -0.44
LDLR-201ENST00000252444 IFNA5P01569 189 aa12.29□□□□□ -0.44
LDLR-201ENST00000252444 FCER2P06734 321 aa12.29□□□□□ -0.44
LDLR-201ENST00000252444 RPS25P62851 125 aaKnown RBP12.29□□□□□ -0.44
LDLR-201ENST00000252444 B3GNTL1Q67FW5 361 aaPredicted RBP12.29□□□□□ -0.44
LDLR-201ENST00000252444 MOB1BQ7L9L4 216 aa12.29□□□□□ -0.44
LDLR-201ENST00000252444 CDH26Q8IXH8 852 aa12.29□□□□□ -0.44
LDLR-201ENST00000252444 OR56B2PQ8NGI1 322 aa12.29□□□□□ -0.44
LDLR-201ENST00000252444 FAM122AQ96E09 287 aa12.29□□□□□ -0.44
LDLR-201ENST00000252444 LIN7BQ9HAP6 207 aa12.29□□□□□ -0.44
LDLR-201ENST00000252444 SLC5A6Q9Y289 635 aa12.29□□□□□ -0.44
LDLR-201ENST00000252444 KCNE3Q9Y6H6 103 aa12.29□□□□□ -0.44
LDLR-201ENST00000252444 LOC107986453A0A1B0GWG9 222 aa12.29□□□□□ -0.44
LDLR-201ENST00000252444 MYF5P13349 255 aa12.29□□□□□ -0.44
LDLR-201ENST00000252444 TAAR8Q969N4 342 aa12.29□□□□□ -0.44
LDLR-201ENST00000252444 OPALINQ96PE5 141 aa12.29□□□□□ -0.44
LDLR-201ENST00000252444 GAL3ST1Q99999 423 aa12.29□□□□□ -0.44
LDLR-201ENST00000252444 UQCC2Q9BRT2 126 aa12.29□□□□□ -0.44
LDLR-201ENST00000252444 MED20Q9H944 212 aa12.29□□□□□ -0.44
LDLR-201ENST00000252444 PATE3B3GLJ2 98 aa12.29□□□□□ -0.44
LDLR-201ENST00000252444 SPINT2O43291 252 aa12.29□□□□□ -0.44
LDLR-201ENST00000252444 MAKP20794 623 aa12.29□□□□□ -0.44
LDLR-201ENST00000252444 P2RY14Q15391 338 aa12.29□□□□□ -0.44
LDLR-201ENST00000252444 LIPNQ5VXI9 398 aa12.29□□□□□ -0.44
LDLR-201ENST00000252444 C17orf82Q86X59 251 aaPredicted RBP12.29□□□□□ -0.44
LDLR-201ENST00000252444 ZDHHC23Q8IYP9 409 aa12.29□□□□□ -0.44
LDLR-201ENST00000252444 OR4M1Q8NGD0 313 aa12.29□□□□□ -0.44
LDLR-201ENST00000252444 NDNFQ8TB73 568 aa12.29□□□□□ -0.44
LDLR-201ENST00000252444 UPRTQ96BW1 309 aa12.29□□□□□ -0.44
LDLR-201ENST00000252444 ANKRD10Q9NXR5 420 aa12.29□□□□□ -0.44
LDLR-201ENST00000252444 AHRRA9YTQ3 701 aa12.28□□□□□ -0.44
LDLR-201ENST00000252444 H7C1C5 153 aa12.28□□□□□ -0.44
LDLR-201ENST00000252444 PPP3CBP16298 524 aa12.28□□□□□ -0.44
LDLR-201ENST00000252444 CD97P48960 835 aa12.28□□□□□ -0.44
LDLR-201ENST00000252444 GSG1Q2KHT4 349 aa12.28□□□□□ -0.44
LDLR-201ENST00000252444 TMED4Q7Z7H5 227 aa12.28□□□□□ -0.44
LDLR-201ENST00000252444 C9orf40Q8IXQ3 194 aa12.28□□□□□ -0.44
LDLR-201ENST00000252444 CENPSQ8N2Z9 138 aa12.28□□□□□ -0.44
LDLR-201ENST00000252444 OR2M2Q96R28 347 aa12.28□□□□□ -0.44
LDLR-201ENST00000252444 SLC25A21Q9BQT8 299 aaPredicted RBP12.28□□□□□ -0.44
LDLR-201ENST00000252444 NTN4Q9HB63 628 aa12.28□□□□□ -0.44
LDLR-201ENST00000252444 A0A1W2PNR3 127 aa12.28□□□□□ -0.44
LDLR-201ENST00000252444 IFNL4K9M1U5 179 aa12.28□□□□□ -0.44
LDLR-201ENST00000252444 LACC1Q8IV20 430 aa12.28□□□□□ -0.44
LDLR-201ENST00000252444 ZBTB44Q8NCP5 570 aa12.28□□□□□ -0.44
LDLR-201ENST00000252444 TBC1D15Q8TC07 691 aa12.28□□□□□ -0.44
LDLR-201ENST00000252444 LRRC20Q8TCA0 184 aa12.28□□□□□ -0.44
LDLR-201ENST00000252444 SLC25A46Q96AG3 418 aa12.28□□□□□ -0.44
LDLR-201ENST00000252444 BARHL1Q9BZE3 327 aa12.28□□□□□ -0.44
LDLR-201ENST00000252444 OR11A1Q9GZK7 315 aa12.28□□□□□ -0.44
LDLR-201ENST00000252444 ESRP2Q9H6T0 727 aaKnown RBP12.28□□□□□ -0.44
LDLR-201ENST00000252444 IGLV3-12A0A075B6K2 115 aa12.28□□□□□ -0.44
LDLR-201ENST00000252444 P2RY10O00398 339 aa12.28□□□□□ -0.44
LDLR-201ENST00000252444 CT45A8P0DMV1 189 aa12.28□□□□□ -0.44
LDLR-201ENST00000252444 CT45A9P0DMV2 189 aa12.28□□□□□ -0.44
LDLR-201ENST00000252444 ZNF44P15621 663 aa12.28□□□□□ -0.44
LDLR-201ENST00000252444 CT45A2Q5DJT8 189 aa12.28□□□□□ -0.44
LDLR-201ENST00000252444 OR10D3Q8NH80 312 aa12.28□□□□□ -0.44
LDLR-201ENST00000252444 PBOV1Q9GZY1 135 aa12.28□□□□□ -0.44
LDLR-201ENST00000252444 GMPR2Q9P2T1 348 aaKnown RBP12.28□□□□□ -0.44
LDLR-201ENST00000252444 SC5DO75845 299 aa12.28□□□□□ -0.44
LDLR-201ENST00000252444 LY86O95711 162 aa12.28□□□□□ -0.44
LDLR-201ENST00000252444 CSF2RBP32927 897 aa12.28□□□□□ -0.44
LDLR-201ENST00000252444 FZD5Q13467 585 aa12.28□□□□□ -0.44
LDLR-201ENST00000252444 RGS7BPQ6MZT1 257 aaPredicted RBP12.28□□□□□ -0.44
LDLR-201ENST00000252444 OR4N2Q8NGD1 307 aa12.28□□□□□ -0.44
LDLR-201ENST00000252444 OR6F1Q8NGZ6 308 aa12.28□□□□□ -0.44
LDLR-201ENST00000252444 PAQR8Q8TEZ7 354 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 140.9 ms