RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 C6orf62Q9GZU0 229 aaPredicted RBP12.55□□□□□ -0.4
SDF2-201ENST00000247020 MOB1AQ9H8S9 216 aa12.55□□□□□ -0.4
SDF2-201ENST00000247020 PLSCR2Q9NRY7 297 aa12.55□□□□□ -0.4
SDF2-201ENST00000247020 SPRR3Q9UBC9 169 aa12.55□□□□□ -0.4
SDF2-201ENST00000247020 GDF2Q9UK05 429 aaPredicted RBP12.55□□□□□ -0.4
SDF2-201ENST00000247020 NOSIPQ9Y314 301 aaKnown RBP12.55□□□□□ -0.4
SDF2-201ENST00000247020 TAF4O00268 1085 aa12.54□□□□□ -0.4
SDF2-201ENST00000247020 MRPL33O75394 65 aaKnown RBP12.54□□□□□ -0.4
SDF2-201ENST00000247020 MXD1Q05195 221 aa12.54□□□□□ -0.4
SDF2-201ENST00000247020 INSL4Q14641 139 aa12.54□□□□□ -0.4
SDF2-201ENST00000247020 OR7E24Q6IFN5 339 aa12.54□□□□□ -0.4
SDF2-201ENST00000247020 KLHL24Q6TFL4 600 aa12.54□□□□□ -0.4
SDF2-201ENST00000247020 PRSS35Q8N3Z0 413 aa12.54□□□□□ -0.4
SDF2-201ENST00000247020 ZNF676Q8N7Q3 588 aa12.54□□□□□ -0.4
SDF2-201ENST00000247020 GPR148Q8TDV2 347 aa12.54□□□□□ -0.4
SDF2-201ENST00000247020 ACOT12Q8WYK0 555 aa12.54□□□□□ -0.4
SDF2-201ENST00000247020 HSD17B8Q92506 261 aa12.54□□□□□ -0.4
SDF2-201ENST00000247020 KCTD12Q96CX2 325 aaKnown RBP12.54□□□□□ -0.4
SDF2-201ENST00000247020 WDFY2Q96P53 400 aa12.54□□□□□ -0.4
SDF2-201ENST00000247020 RBM24Q9BX46 236 aaKnown RBP12.54□□□□□ -0.4
SDF2-201ENST00000247020 SLCO5A1Q9H2Y9 848 aa12.54□□□□□ -0.4
SDF2-201ENST00000247020 SMURF1Q9HCE7 757 aa12.54□□□□□ -0.4
SDF2-201ENST00000247020 PLEKHB1Q9UF11 243 aaPredicted RBP12.54□□□□□ -0.4
SDF2-201ENST00000247020 PHF3Q92576 2039 aaKnown RBP12.54□□□□□ -0.4
SDF2-201ENST00000247020 ZNF407Q9C0G0 2248 aa12.53□□□□□ -0.4
SDF2-201ENST00000247020 MKRN2OSH3BPM6 223 aa12.53□□□□□ -0.4
SDF2-201ENST00000247020 RPL36A-HNRNPH2H7BZ11 118 aa12.53□□□□□ -0.4
SDF2-201ENST00000247020 RRP8O43159 456 aaKnown RBP12.53□□□□□ -0.4
SDF2-201ENST00000247020 YES1P07947 543 aa12.53□□□□□ -0.4
SDF2-201ENST00000247020 CDAP32320 146 aa12.53□□□□□ -0.4
SDF2-201ENST00000247020 KIR3DL2P43630 455 aa12.53□□□□□ -0.4
SDF2-201ENST00000247020 UCNP55089 124 aa12.53□□□□□ -0.4
SDF2-201ENST00000247020 GRB2P62993 217 aaKnown RBP12.53□□□□□ -0.4
SDF2-201ENST00000247020 HIST1H3AP68431 136 aa12.53□□□□□ -0.4
SDF2-201ENST00000247020 PMP22Q01453 160 aa12.53□□□□□ -0.4
SDF2-201ENST00000247020 ZNF45Q02386 682 aa12.53□□□□□ -0.4
SDF2-201ENST00000247020 HSD17B12Q53GQ0 312 aa12.53□□□□□ -0.4
SDF2-201ENST00000247020 WDR38Q5JTN6 314 aa12.53□□□□□ -0.4
SDF2-201ENST00000247020 HIST2H3PS2Q5TEC6 136 aa12.53□□□□□ -0.4
SDF2-201ENST00000247020 FAM27BQ5VT28 67 aa12.53□□□□□ -0.4
SDF2-201ENST00000247020 ZNF704Q6ZNC4 412 aaPredicted RBP12.53□□□□□ -0.4
SDF2-201ENST00000247020 HIST2H3AQ71DI3 136 aa12.53□□□□□ -0.4
SDF2-201ENST00000247020 GJC3Q8NFK1 279 aa12.53□□□□□ -0.4
SDF2-201ENST00000247020 IL17RDQ8NFM7 739 aa12.53□□□□□ -0.4
SDF2-201ENST00000247020 RGP1Q92546 391 aaPredicted RBP12.53□□□□□ -0.4
SDF2-201ENST00000247020 SARAFQ96BY9 339 aa12.53□□□□□ -0.4
SDF2-201ENST00000247020 OR14A2Q96R54 314 aa12.53□□□□□ -0.4
SDF2-201ENST00000247020 ZNF416Q9BWM5 594 aa12.53□□□□□ -0.4
SDF2-201ENST00000247020 TPK1Q9H3S4 243 aa12.53□□□□□ -0.4
SDF2-201ENST00000247020 EMC7Q9NPA0 242 aa12.53□□□□□ -0.4
SDF2-201ENST00000247020 GLRX2Q9NS18 164 aa12.53□□□□□ -0.4
SDF2-201ENST00000247020 CAMK2AQ9UQM7 478 aa12.53□□□□□ -0.4
SDF2-201ENST00000247020 DNAJC13O75165 2243 aa12.53□□□□□ -0.4
SDF2-201ENST00000247020 SHISA3A0PJX4 238 aa12.52□□□□□ -0.4
SDF2-201ENST00000247020 LOC110117498-PIK3R3F6TDL0 507 aa12.52□□□□□ -0.4
SDF2-201ENST00000247020 K7ENP7 123 aa12.52□□□□□ -0.4
SDF2-201ENST00000247020 ISG15P05161 165 aa12.52□□□□□ -0.4
SDF2-201ENST00000247020 CST2P09228 141 aa12.52□□□□□ -0.4
SDF2-201ENST00000247020 CLEC2LP0C7M8 214 aa12.52□□□□□ -0.4
SDF2-201ENST00000247020 CTSSP25774 331 aa12.52□□□□□ -0.4
SDF2-201ENST00000247020 CD40LGP29965 261 aa12.52□□□□□ -0.4
SDF2-201ENST00000247020 NTF4P34130 210 aa12.52□□□□□ -0.4
SDF2-201ENST00000247020 SGCAQ16586 387 aa12.52□□□□□ -0.4
SDF2-201ENST00000247020 OTPQ5XKR4 325 aa12.52□□□□□ -0.4
SDF2-201ENST00000247020 MZT2AQ6P582 158 aa12.52□□□□□ -0.4
SDF2-201ENST00000247020 INO80CQ6PI98 192 aaPredicted RBP12.52□□□□□ -0.4
SDF2-201ENST00000247020 ADGRE4PQ86SQ3 457 aa12.52□□□□□ -0.4
SDF2-201ENST00000247020 SYT9Q86SS6 491 aa12.52□□□□□ -0.4
SDF2-201ENST00000247020 SIAH3Q8IW03 269 aa12.52□□□□□ -0.4
SDF2-201ENST00000247020 MCEMP1Q8IX19 187 aa12.52□□□□□ -0.4
SDF2-201ENST00000247020 MFSD4AQ8N468 514 aa12.52□□□□□ -0.4
SDF2-201ENST00000247020 OR10S1Q8NGN2 331 aa12.52□□□□□ -0.4
SDF2-201ENST00000247020 OR13C5Q8NGS8 318 aa12.52□□□□□ -0.4
SDF2-201ENST00000247020 FNDC9Q8TBE3 224 aa12.52□□□□□ -0.4
SDF2-201ENST00000247020 DERL3Q96Q80 235 aa12.52□□□□□ -0.4
SDF2-201ENST00000247020 ZCCHC4Q9H5U6 513 aa12.52□□□□□ -0.4
SDF2-201ENST00000247020 CENPMQ9NSP4 180 aa12.52□□□□□ -0.4
SDF2-201ENST00000247020 DDX28Q9NUL7 540 aaKnown RBP12.52□□□□□ -0.4
SDF2-201ENST00000247020 TMEM38BQ9NVV0 291 aa12.52□□□□□ -0.4
SDF2-201ENST00000247020 ASH2LQ9UBL3 628 aa12.52□□□□□ -0.4
SDF2-201ENST00000247020 B3GNT3Q9Y2A9 372 aa12.52□□□□□ -0.4
SDF2-201ENST00000247020 OR14I1A6ND48 311 aa12.52□□□□□ -0.41
SDF2-201ENST00000247020 ACOD1A6NK06 481 aa12.52□□□□□ -0.41
SDF2-201ENST00000247020 PDCD5O14737 125 aa12.52□□□□□ -0.41
SDF2-201ENST00000247020 WNT11O96014 354 aa12.52□□□□□ -0.41
SDF2-201ENST00000247020 OCM2P0CE71 109 aa12.52□□□□□ -0.41
SDF2-201ENST00000247020 UBCP0CG48 685 aaKnown RBP12.52□□□□□ -0.41
SDF2-201ENST00000247020 BMP4P12644 408 aa12.52□□□□□ -0.41
SDF2-201ENST00000247020 RAB3BP20337 219 aa12.52□□□□□ -0.41
SDF2-201ENST00000247020 PSMA6P60900 246 aaKnown RBP12.52□□□□□ -0.41
SDF2-201ENST00000247020 ENDOGQ14249 297 aaKnown RBP12.52□□□□□ -0.41
SDF2-201ENST00000247020 TMEM244Q5VVB8 128 aa12.52□□□□□ -0.41
SDF2-201ENST00000247020 CORO6Q6QEF8 472 aa12.52□□□□□ -0.41
SDF2-201ENST00000247020 CFAP77Q6ZQR2 320 aa12.52□□□□□ -0.41
SDF2-201ENST00000247020 CCDC190Q86UF4 302 aa12.52□□□□□ -0.41
SDF2-201ENST00000247020 FOXB1Q99853 325 aa12.52□□□□□ -0.41
SDF2-201ENST00000247020 PPIL3Q9H2H8 161 aaKnown RBP12.52□□□□□ -0.41
SDF2-201ENST00000247020 CRLF2Q9HC73 371 aa12.52□□□□□ -0.41
SDF2-201ENST00000247020 GPR35Q9HC97 309 aa12.52□□□□□ -0.41
SDF2-201ENST00000247020 PNRC2Q9NPJ4 139 aaKnown RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 143.8 ms