RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 OR8B4Q96RC9 309 aa6.88□□□□□ -1.31
RIF1-201ENST00000243326 ALOX12BO75342 701 aa6.88□□□□□ -1.31
RIF1-201ENST00000243326 TMEFF2Q9UIK5 374 aaPredicted RBP6.88□□□□□ -1.31
RIF1-201ENST00000243326 PLCH1Q4KWH8 1693 aa6.88□□□□□ -1.31
RIF1-201ENST00000243326 H3BMH7 237 aa6.88□□□□□ -1.31
RIF1-201ENST00000243326 PRAMEF4O60810 478 aa6.88□□□□□ -1.31
RIF1-201ENST00000243326 POU3F2P20265 443 aaPredicted RBP6.88□□□□□ -1.31
RIF1-201ENST00000243326 RPS4XP62701 263 aaKnown RBP6.88□□□□□ -1.31
RIF1-201ENST00000243326 MYPOPQ86VE0 399 aaPredicted RBP6.88□□□□□ -1.31
RIF1-201ENST00000243326 ASB13Q8WXK3 278 aa6.88□□□□□ -1.31
RIF1-201ENST00000243326 CDK5RAP2Q96SN8 1893 aa6.88□□□□□ -1.31
RIF1-201ENST00000243326 TRIM77I1YAP6 450 aa6.88□□□□□ -1.31
RIF1-201ENST00000243326 TP53I11O14683 189 aa6.88□□□□□ -1.31
RIF1-201ENST00000243326 CA12O43570 354 aa6.88□□□□□ -1.31
RIF1-201ENST00000243326 HNRNPA2B1P22626 353 aaKnown RBP6.88□□□□□ -1.31
RIF1-201ENST00000243326 DAP3P51398 398 aaKnown RBP6.88□□□□□ -1.31
RIF1-201ENST00000243326 SNTB1Q13884 538 aaKnown RBP6.88□□□□□ -1.31
RIF1-201ENST00000243326 GAREM2Q75VX8 874 aa6.88□□□□□ -1.31
RIF1-201ENST00000243326 OR8U1Q8NH10 309 aa6.88□□□□□ -1.31
RIF1-201ENST00000243326 SLC25A31Q9H0C2 315 aa6.88□□□□□ -1.31
RIF1-201ENST00000243326 ARV1Q9H2C2 271 aa6.88□□□□□ -1.31
RIF1-201ENST00000243326 C1orf123Q9NWV4 160 aa6.88□□□□□ -1.31
RIF1-201ENST00000243326 RNF186Q9NXI6 227 aa6.88□□□□□ -1.31
RIF1-201ENST00000243326 MYOGP15173 224 aa6.88□□□□□ -1.31
RIF1-201ENST00000243326 CPEP16870 476 aa6.88□□□□□ -1.31
RIF1-201ENST00000243326 CRABP1P29762 137 aa6.88□□□□□ -1.31
RIF1-201ENST00000243326 MNX1P50219 401 aaPredicted RBP6.88□□□□□ -1.31
RIF1-201ENST00000243326 MAP2K6P52564 334 aa6.88□□□□□ -1.31
RIF1-201ENST00000243326 CLDN20P56880 219 aa6.88□□□□□ -1.31
RIF1-201ENST00000243326 AMER3Q8N944 861 aa6.88□□□□□ -1.31
RIF1-201ENST00000243326 BORCS7Q96B45 105 aa6.88□□□□□ -1.31
RIF1-201ENST00000243326 UPRTQ96BW1 309 aa6.88□□□□□ -1.31
RIF1-201ENST00000243326 A0A1W2PR48 441 aa6.88□□□□□ -1.31
RIF1-201ENST00000243326 TMEM200CA6NKL6 621 aa6.88□□□□□ -1.31
RIF1-201ENST00000243326 GPR75O95800 540 aa6.88□□□□□ -1.31
RIF1-201ENST00000243326 FAM71E1Q6IPT2 247 aa6.88□□□□□ -1.31
RIF1-201ENST00000243326 PTTG3PQ9NZH4 202 aa6.88□□□□□ -1.31
RIF1-201ENST00000243326 A0A087WUU8 490 aa6.88□□□□□ -1.31
RIF1-201ENST00000243326 LOC100289279A0A1B0GTE1 492 aa6.88□□□□□ -1.31
RIF1-201ENST00000243326 RFPL4AA6NLU0 287 aa6.88□□□□□ -1.31
RIF1-201ENST00000243326 RFPL4AL1F8VTS6 287 aa6.88□□□□□ -1.31
RIF1-201ENST00000243326 NAGAP17050 411 aa6.88□□□□□ -1.31
RIF1-201ENST00000243326 EVX1P49640 407 aa6.88□□□□□ -1.31
RIF1-201ENST00000243326 TPRA1Q86W33 373 aa6.88□□□□□ -1.31
RIF1-201ENST00000243326 CDH20Q9HBT6 801 aa6.88□□□□□ -1.31
RIF1-201ENST00000243326 TEKQ02763 1124 aa6.87□□□□□ -1.31
RIF1-201ENST00000243326 RUNX3Q13761 415 aa6.87□□□□□ -1.31
RIF1-201ENST00000243326 H3BQ06 376 aaPredicted RBP6.87□□□□□ -1.31
RIF1-201ENST00000243326 ZNF623O75123 536 aa6.87□□□□□ -1.31
RIF1-201ENST00000243326 OR10J4P0C629 311 aa6.87□□□□□ -1.31
RIF1-201ENST00000243326 OR4E1P0C645 316 aa6.87□□□□□ -1.31
RIF1-201ENST00000243326 MRPS10P82664 201 aaKnown RBP6.87□□□□□ -1.31
RIF1-201ENST00000243326 NPSR1Q6W5P4 371 aa6.87□□□□□ -1.31
RIF1-201ENST00000243326 SLC35A4Q96G79 324 aa6.87□□□□□ -1.31
RIF1-201ENST00000243326 TOPAZ1Q8N9V7 1692 aa6.87□□□□□ -1.31
RIF1-201ENST00000243326 PRSS38A1L453 326 aa6.87□□□□□ -1.31
RIF1-201ENST00000243326 CST7O76096 145 aa6.87□□□□□ -1.31
RIF1-201ENST00000243326 SEMA3BQ13214 749 aa6.87□□□□□ -1.31
RIF1-201ENST00000243326 IL22RA2Q969J5 263 aa6.87□□□□□ -1.31
RIF1-201ENST00000243326 TP53TG5Q9Y2B4 290 aa6.87□□□□□ -1.31
RIF1-201ENST00000243326 FGF8P55075 233 aaPredicted RBP6.87□□□□□ -1.31
RIF1-201ENST00000243326 XKR7Q5GH72 579 aa6.87□□□□□ -1.31
RIF1-201ENST00000243326 ZBTB37Q5TC79 503 aa6.87□□□□□ -1.31
RIF1-201ENST00000243326 THNSL2Q86YJ6 484 aa6.87□□□□□ -1.31
RIF1-201ENST00000243326 OR4C16Q8NGL9 310 aa6.87□□□□□ -1.31
RIF1-201ENST00000243326 TCEAL7Q9BRU2 100 aa6.87□□□□□ -1.31
RIF1-201ENST00000243326 RBM38Q9H0Z9 239 aaKnown RBP6.87□□□□□ -1.31
RIF1-201ENST00000243326 FANCMQ8IYD8 2048 aa6.87□□□□□ -1.31
RIF1-201ENST00000243326 A6NIZ1 184 aa6.87□□□□□ -1.31
RIF1-201ENST00000243326 OPN1MWP04001 364 aa6.87□□□□□ -1.31
RIF1-201ENST00000243326 TPOP07202 933 aa6.87□□□□□ -1.31
RIF1-201ENST00000243326 OPN1MW2P0DN77 364 aa6.87□□□□□ -1.31
RIF1-201ENST00000243326 OPN1MW3P0DN78 364 aa6.87□□□□□ -1.31
RIF1-201ENST00000243326 SPI1P17947 270 aa6.87□□□□□ -1.31
RIF1-201ENST00000243326 PMCHP20382 165 aa6.87□□□□□ -1.31
RIF1-201ENST00000243326 P2RX1P51575 399 aa6.87□□□□□ -1.31
RIF1-201ENST00000243326 RAP1BP61224 184 aa6.87□□□□□ -1.31
RIF1-201ENST00000243326 BTG2P78543 158 aa6.87□□□□□ -1.31
RIF1-201ENST00000243326 ELAVL3Q14576 367 aaKnown RBP6.87□□□□□ -1.31
RIF1-201ENST00000243326 ZNF239Q16600 458 aaKnown RBP6.87□□□□□ -1.31
RIF1-201ENST00000243326 RSPO2Q6UXX9 243 aaPredicted RBP6.87□□□□□ -1.31
RIF1-201ENST00000243326 SRRQ9GZT4 340 aa6.87□□□□□ -1.31
RIF1-201ENST00000243326 OR52A1Q9UKL2 312 aa6.87□□□□□ -1.31
RIF1-201ENST00000243326 A0A096LPE4 126 aa6.87□□□□□ -1.31
RIF1-201ENST00000243326 A0A1W2PPZ6 126 aa6.87□□□□□ -1.31
RIF1-201ENST00000243326 ABLIM3O94929 683 aa6.87□□□□□ -1.31
RIF1-201ENST00000243326 EFNA3P52797 238 aa6.87□□□□□ -1.31
RIF1-201ENST00000243326 LIPNQ5VXI9 398 aa6.87□□□□□ -1.31
RIF1-201ENST00000243326 MS4A8Q9BY19 250 aa6.87□□□□□ -1.31
RIF1-201ENST00000243326 PIAS3Q9Y6X2 628 aa6.87□□□□□ -1.31
RIF1-201ENST00000243326 EIF3GO75821 320 aaKnown RBP eCLIP6.87□□□□□ -1.31
RIF1-201ENST00000243326 GIPP09681 153 aaPredicted RBP6.87□□□□□ -1.31
RIF1-201ENST00000243326 NTSR1P30989 418 aa6.87□□□□□ -1.31
RIF1-201ENST00000243326 ATP1B3P54709 279 aa6.87□□□□□ -1.31
RIF1-201ENST00000243326 CAMK2BQ13554 666 aa6.87□□□□□ -1.31
RIF1-201ENST00000243326 ELOCQ15369 112 aa6.87□□□□□ -1.31
RIF1-201ENST00000243326 PDLIM3Q53GG5 364 aaPredicted RBP6.87□□□□□ -1.31
RIF1-201ENST00000243326 TMEM244Q5VVB8 128 aa6.87□□□□□ -1.31
RIF1-201ENST00000243326 PTOV1Q86YD1 416 aa6.87□□□□□ -1.31
RIF1-201ENST00000243326 DAZLQ92904 295 aaKnown RBP6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms