RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 CD53P19397 219 aa9.77□□□□□ -0.85
SF3B6-201ENST00000233468 IGFBP5P24593 272 aa9.77□□□□□ -0.85
SF3B6-201ENST00000233468 STOMP27105 288 aa9.77□□□□□ -0.85
SF3B6-201ENST00000233468 FMO3P31513 532 aa9.77□□□□□ -0.85
SF3B6-201ENST00000233468 RAD52P43351 418 aa9.77□□□□□ -0.85
SF3B6-201ENST00000233468 GDI2P50395 445 aaKnown RBP9.77□□□□□ -0.85
SF3B6-201ENST00000233468 DAPP51397 102 aa9.77□□□□□ -0.85
SF3B6-201ENST00000233468 CRISP1P54107 249 aa9.77□□□□□ -0.85
SF3B6-201ENST00000233468 SELENOVP59797 346 aa9.77□□□□□ -0.85
SF3B6-201ENST00000233468 ETFDHQ16134 617 aa9.77□□□□□ -0.85
SF3B6-201ENST00000233468 PABPC1L2AQ5JQF8 200 aa9.77□□□□□ -0.85
SF3B6-201ENST00000233468 LRRC75A-AS1Q8N1F1 130 aa9.77□□□□□ -0.85
SF3B6-201ENST00000233468 SLC37A3Q8NCC5 494 aa9.77□□□□□ -0.85
SF3B6-201ENST00000233468 ICA1LQ8NDH6 482 aa9.77□□□□□ -0.85
SF3B6-201ENST00000233468 GJC3Q8NFK1 279 aa9.77□□□□□ -0.85
SF3B6-201ENST00000233468 OR2AJ1Q8NGZ0 328 aa9.77□□□□□ -0.85
SF3B6-201ENST00000233468 LILRB1Q8NHL6 650 aaPredicted RBP9.77□□□□□ -0.85
SF3B6-201ENST00000233468 FBXO17Q96EF6 278 aa9.77□□□□□ -0.85
SF3B6-201ENST00000233468 OR2H1Q9GZK4 316 aa9.77□□□□□ -0.85
SF3B6-201ENST00000233468 SEMA6AQ9H2E6 1030 aa9.77□□□□□ -0.85
SF3B6-201ENST00000233468 ZNF442Q9H7R0 627 aa9.77□□□□□ -0.85
SF3B6-201ENST00000233468 NOX3Q9HBY0 568 aa9.77□□□□□ -0.85
SF3B6-201ENST00000233468 S100A14Q9HCY8 104 aa9.77□□□□□ -0.85
SF3B6-201ENST00000233468 CBLN4Q9NTU7 201 aa9.77□□□□□ -0.85
SF3B6-201ENST00000233468 OAZ3Q9UMX2 235 aa9.77□□□□□ -0.85
SF3B6-201ENST00000233468 PMF1-BGLAPU3KQ54 211 aa9.77□□□□□ -0.85
SF3B6-201ENST00000233468 JMJD1CQ15652 2540 aa9.77□□□□□ -0.85
SF3B6-201ENST00000233468 TLN2Q9Y4G6 2542 aa9.77□□□□□ -0.85
SF3B6-201ENST00000233468 IGLV1-36A0A0B4J1U3 117 aa9.76□□□□□ -0.85
SF3B6-201ENST00000233468 B9A039 149 aa9.76□□□□□ -0.85
SF3B6-201ENST00000233468 PRR23D1E9PI22 279 aaPredicted RBP9.76□□□□□ -0.85
SF3B6-201ENST00000233468 SGCEO43556 437 aa9.76□□□□□ -0.85
SF3B6-201ENST00000233468 TP53P04637 393 aaPredicted RBP9.76□□□□□ -0.85
SF3B6-201ENST00000233468 IGFBP1P08833 259 aaPredicted RBP9.76□□□□□ -0.85
SF3B6-201ENST00000233468 CELA3BP08861 270 aa9.76□□□□□ -0.85
SF3B6-201ENST00000233468 DANCRP0C864 163 aa9.76□□□□□ -0.85
SF3B6-201ENST00000233468 PRR23D2P0DMB1 279 aaPredicted RBP9.76□□□□□ -0.85
SF3B6-201ENST00000233468 ZNF35P13682 527 aa9.76□□□□□ -0.85
SF3B6-201ENST00000233468 NR4A1P22736 598 aa9.76□□□□□ -0.85
SF3B6-201ENST00000233468 PCSK6P29122 969 aa9.76□□□□□ -0.85
SF3B6-201ENST00000233468 CALCRP30988 508 aa9.76□□□□□ -0.85
SF3B6-201ENST00000233468 GLRXP35754 106 aa9.76□□□□□ -0.85
SF3B6-201ENST00000233468 SERPINF1P36955 418 aa9.76□□□□□ -0.85
SF3B6-201ENST00000233468 SNRPD2P62316 118 aaKnown RBP9.76□□□□□ -0.85
SF3B6-201ENST00000233468 CDK5Q00535 292 aa9.76□□□□□ -0.85
SF3B6-201ENST00000233468 PSG4Q00888 419 aa9.76□□□□□ -0.85
SF3B6-201ENST00000233468 TEKQ02763 1124 aa9.76□□□□□ -0.85
SF3B6-201ENST00000233468 SPOCK1Q08629 439 aa9.76□□□□□ -0.85
SF3B6-201ENST00000233468 SNTB2Q13425 540 aaKnown RBP9.76□□□□□ -0.85
SF3B6-201ENST00000233468 CRMP1Q14194 572 aa9.76□□□□□ -0.85
SF3B6-201ENST00000233468 SNAPC1Q16533 368 aa9.76□□□□□ -0.85
SF3B6-201ENST00000233468 MOGQ16653 247 aa9.76□□□□□ -0.85
SF3B6-201ENST00000233468 KDM4DQ6B0I6 523 aa9.76□□□□□ -0.85
SF3B6-201ENST00000233468 DTX2Q86UW9 622 aa9.76□□□□□ -0.85
SF3B6-201ENST00000233468 OR4Q3Q8NH05 313 aa9.76□□□□□ -0.85
SF3B6-201ENST00000233468 FGFBP3Q8TAT2 258 aa9.76□□□□□ -0.85
SF3B6-201ENST00000233468 C11orf40Q8WZ69 217 aa9.76□□□□□ -0.85
SF3B6-201ENST00000233468 NEUROG1Q92886 237 aa9.76□□□□□ -0.85
SF3B6-201ENST00000233468 OTULINQ96BN8 352 aa9.76□□□□□ -0.85
SF3B6-201ENST00000233468 ZNF75AQ96N20 296 aa9.76□□□□□ -0.85
SF3B6-201ENST00000233468 TSSK2Q96PF2 358 aa9.76□□□□□ -0.85
SF3B6-201ENST00000233468 BCL2L14Q9BZR8 327 aa9.76□□□□□ -0.85
SF3B6-201ENST00000233468 ELOVL3Q9HB03 270 aa9.76□□□□□ -0.85
SF3B6-201ENST00000233468 SLC25A19Q9HC21 320 aa9.76□□□□□ -0.85
SF3B6-201ENST00000233468 EMC7Q9NPA0 242 aa9.76□□□□□ -0.85
SF3B6-201ENST00000233468 PLEK2Q9NYT0 353 aa9.76□□□□□ -0.85
SF3B6-201ENST00000233468 ASH2LQ9UBL3 628 aa9.76□□□□□ -0.85
SF3B6-201ENST00000233468 ATPIF1Q9UII2 106 aa9.76□□□□□ -0.85
SF3B6-201ENST00000233468 CMAHPQ9Y471 501 aa9.76□□□□□ -0.85
SF3B6-201ENST00000233468 C5orf49A4QMS7 147 aa9.75□□□□□ -0.85
SF3B6-201ENST00000233468 SAC3D1A6NKF1 404 aa9.75□□□□□ -0.85
SF3B6-201ENST00000233468 H3BNX3 289 aa9.75□□□□□ -0.85
SF3B6-201ENST00000233468 WIPF1O43516 503 aa9.75□□□□□ -0.85
SF3B6-201ENST00000233468 DOK2O60496 412 aa9.75□□□□□ -0.85
SF3B6-201ENST00000233468 BAG2O95816 211 aa9.75□□□□□ -0.85
SF3B6-201ENST00000233468 ERCC1P07992 297 aaPredicted RBP9.75□□□□□ -0.85
SF3B6-201ENST00000233468 FOSL1P15407 271 aa9.75□□□□□ -0.85
SF3B6-201ENST00000233468 PAX1P15863 534 aa9.75□□□□□ -0.85
SF3B6-201ENST00000233468 CCNOP22674 350 aa9.75□□□□□ -0.85
SF3B6-201ENST00000233468 TUBG1P23258 451 aa9.75□□□□□ -0.85
SF3B6-201ENST00000233468 RAD23AP54725 363 aa9.75□□□□□ -0.85
SF3B6-201ENST00000233468 ECH1Q13011 328 aa9.75□□□□□ -0.85
SF3B6-201ENST00000233468 ENDOGQ14249 297 aaKnown RBP9.75□□□□□ -0.85
SF3B6-201ENST00000233468 PTGES3Q15185 160 aaKnown RBP9.75□□□□□ -0.85
SF3B6-201ENST00000233468 OXLD1Q5BKU9 147 aa9.75□□□□□ -0.85
SF3B6-201ENST00000233468 KRT80Q6KB66 452 aa9.75□□□□□ -0.85
SF3B6-201ENST00000233468 VHLLQ6RSH7 139 aa9.75□□□□□ -0.85
SF3B6-201ENST00000233468 IQCF1Q8N6M8 205 aa9.75□□□□□ -0.85
SF3B6-201ENST00000233468 CYB561A3Q8NBI2 242 aa9.75□□□□□ -0.85
SF3B6-201ENST00000233468 SLC26A10Q8NG04 563 aa9.75□□□□□ -0.85
SF3B6-201ENST00000233468 HTRA1Q92743 480 aa9.75□□□□□ -0.85
SF3B6-201ENST00000233468 COG8Q96MW5 612 aa9.75□□□□□ -0.85
SF3B6-201ENST00000233468 DCLRE1CQ96SD1 692 aaKnown RBP9.75□□□□□ -0.85
SF3B6-201ENST00000233468 DDOQ99489 341 aa9.75□□□□□ -0.85
SF3B6-201ENST00000233468 PKP2Q99959 881 aa9.75□□□□□ -0.85
SF3B6-201ENST00000233468 C9orf16Q9BUW7 83 aa9.75□□□□□ -0.85
SF3B6-201ENST00000233468 TRAF4Q9BUZ4 470 aaPredicted RBP9.75□□□□□ -0.85
SF3B6-201ENST00000233468 FN3KQ9H479 309 aa9.75□□□□□ -0.85
SF3B6-201ENST00000233468 BARX1Q9HBU1 254 aaPredicted RBP9.75□□□□□ -0.85
SF3B6-201ENST00000233468 TUBG2Q9NRH3 451 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms