RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 ARAP2Q8WZ64 1704 aa12.62□□□□□ -0.39
HCFC2-201ENST00000229330 MAN2B1O00754 1011 aa12.61□□□□□ -0.39
HCFC2-201ENST00000229330 FABP4P15090 132 aa12.61□□□□□ -0.39
HCFC2-201ENST00000229330 OR1D4P47884 311 aa12.61□□□□□ -0.39
HCFC2-201ENST00000229330 MOGAT2Q3SYC2 334 aa12.61□□□□□ -0.39
HCFC2-201ENST00000229330 FCRL6Q6DN72 434 aa12.61□□□□□ -0.39
HCFC2-201ENST00000229330 CAMKMTQ7Z624 323 aa12.61□□□□□ -0.39
HCFC2-201ENST00000229330 COMMD1Q8N668 190 aa12.61□□□□□ -0.39
HCFC2-201ENST00000229330 GOT1L1Q8NHS2 421 aaPredicted RBP12.61□□□□□ -0.39
HCFC2-201ENST00000229330 FGF13Q92913 245 aa12.61□□□□□ -0.39
HCFC2-201ENST00000229330 GNPNAT1Q96EK6 184 aaPredicted RBP12.61□□□□□ -0.39
HCFC2-201ENST00000229330 SDF2Q99470 211 aa12.61□□□□□ -0.39
HCFC2-201ENST00000229330 C1QTNF6Q9BXI9 259 aa12.61□□□□□ -0.39
HCFC2-201ENST00000229330 FOXJ3Q9UPW0 622 aa12.61□□□□□ -0.39
HCFC2-201ENST00000229330 E5RGE8 158 aa12.61□□□□□ -0.39
HCFC2-201ENST00000229330 LRP3O75074 770 aa12.61□□□□□ -0.39
HCFC2-201ENST00000229330 SYNGR4O95473 234 aa12.61□□□□□ -0.39
HCFC2-201ENST00000229330 BCL6P41182 706 aa12.61□□□□□ -0.39
HCFC2-201ENST00000229330 ERVK-16P61578 105 aa12.61□□□□□ -0.39
HCFC2-201ENST00000229330 GUCA2AQ02747 115 aa12.61□□□□□ -0.39
HCFC2-201ENST00000229330 ZP2Q05996 745 aa12.61□□□□□ -0.39
HCFC2-201ENST00000229330 PLCXD3Q63HM9 321 aa12.61□□□□□ -0.39
HCFC2-201ENST00000229330 BRICD5Q6PL45 260 aa12.61□□□□□ -0.39
HCFC2-201ENST00000229330 TMEFF1Q8IYR6 380 aa12.61□□□□□ -0.39
HCFC2-201ENST00000229330 MARCH1Q8TCQ1 289 aa12.61□□□□□ -0.39
HCFC2-201ENST00000229330 MITD1Q8WV92 249 aa12.61□□□□□ -0.39
HCFC2-201ENST00000229330 MRPL22Q9NWU5 206 aaKnown RBP12.61□□□□□ -0.39
HCFC2-201ENST00000229330 NSG2Q9Y328 171 aa12.61□□□□□ -0.39
HCFC2-201ENST00000229330 BLACEA4D250 179 aa12.61□□□□□ -0.39
HCFC2-201ENST00000229330 RPA2P15927 270 aa12.61□□□□□ -0.39
HCFC2-201ENST00000229330 WNT3P56703 355 aa12.61□□□□□ -0.39
HCFC2-201ENST00000229330 MANEAQ5SRI9 462 aa12.61□□□□□ -0.39
HCFC2-201ENST00000229330 TSSK2Q96PF2 358 aa12.61□□□□□ -0.39
HCFC2-201ENST00000229330 UHRF2Q96PU4 802 aa12.61□□□□□ -0.39
HCFC2-201ENST00000229330 STACQ99469 402 aa12.61□□□□□ -0.39
HCFC2-201ENST00000229330 HCFC2Q9Y5Z7 792 aa12.61□□□□□ -0.39
HCFC2-201ENST00000229330 MICAL3Q7RTP6 2002 aa12.61□□□□□ -0.39
HCFC2-201ENST00000229330 TMEM218A2RU14 115 aa12.61□□□□□ -0.39
HCFC2-201ENST00000229330 A6NLC8 198 aa12.61□□□□□ -0.39
HCFC2-201ENST00000229330 PEX12O00623 359 aa12.61□□□□□ -0.39
HCFC2-201ENST00000229330 BCKDHBP21953 392 aa12.61□□□□□ -0.39
HCFC2-201ENST00000229330 HRH1P35367 487 aa12.61□□□□□ -0.39
HCFC2-201ENST00000229330 RAB38P57729 211 aa12.61□□□□□ -0.39
HCFC2-201ENST00000229330 KIAA0040Q15053 153 aa12.61□□□□□ -0.39
HCFC2-201ENST00000229330 PDLIM3Q53GG5 364 aaPredicted RBP12.61□□□□□ -0.39
HCFC2-201ENST00000229330 MAMSTRQ6ZN01 415 aa12.61□□□□□ -0.39
HCFC2-201ENST00000229330 DND1Q8IYX4 353 aaKnown RBP12.61□□□□□ -0.39
HCFC2-201ENST00000229330 CHAC2Q8WUX2 184 aa12.61□□□□□ -0.39
HCFC2-201ENST00000229330 OR1E3Q8WZA6 343 aa12.61□□□□□ -0.39
HCFC2-201ENST00000229330 TVP23CQ96ET8 276 aa12.61□□□□□ -0.39
HCFC2-201ENST00000229330 APOBEC3BQ9UH17 382 aaKnown RBP12.61□□□□□ -0.39
HCFC2-201ENST00000229330 FBXO4Q9UKT5 387 aa12.61□□□□□ -0.39
HCFC2-201ENST00000229330 TMPRSS11DO60235 418 aa12.61□□□□□ -0.39
HCFC2-201ENST00000229330 ITGB8P26012 769 aa12.61□□□□□ -0.39
HCFC2-201ENST00000229330 RTN4RL1Q86UN2 441 aaPredicted RBP12.61□□□□□ -0.39
HCFC2-201ENST00000229330 TMEM123Q8N131 208 aa12.61□□□□□ -0.39
HCFC2-201ENST00000229330 SEMA6DQ8NFY4 1073 aa12.61□□□□□ -0.39
HCFC2-201ENST00000229330 GDF2Q9UK05 429 aaPredicted RBP12.61□□□□□ -0.39
HCFC2-201ENST00000229330 BTBD17A6NE02 478 aa12.6□□□□□ -0.39
HCFC2-201ENST00000229330 H0YGG7 62 aa12.6□□□□□ -0.39
HCFC2-201ENST00000229330 PLPP2O43688 288 aa12.6□□□□□ -0.39
HCFC2-201ENST00000229330 OR7C1O76099 320 aaPredicted RBP12.6□□□□□ -0.39
HCFC2-201ENST00000229330 CD63P08962 238 aa12.6□□□□□ -0.39
HCFC2-201ENST00000229330 HLA-DOBP13765 273 aa12.6□□□□□ -0.39
HCFC2-201ENST00000229330 NKX2-1P43699 371 aaPredicted RBP12.6□□□□□ -0.39
HCFC2-201ENST00000229330 DUSP8Q13202 625 aa12.6□□□□□ -0.39
HCFC2-201ENST00000229330 ZNF485Q8NCK3 441 aa12.6□□□□□ -0.39
HCFC2-201ENST00000229330 NUDCD2Q8WVJ2 157 aa12.6□□□□□ -0.39
HCFC2-201ENST00000229330 ZDHHC5Q9C0B5 715 aa12.6□□□□□ -0.39
HCFC2-201ENST00000229330 PLK3Q9H4B4 646 aa12.6□□□□□ -0.39
HCFC2-201ENST00000229330 MIOXQ9UGB7 285 aa12.6□□□□□ -0.39
HCFC2-201ENST00000229330 CA14Q9ULX7 337 aa12.6□□□□□ -0.39
HCFC2-201ENST00000229330 RREB1Q92766 1687 aa12.6□□□□□ -0.39
HCFC2-201ENST00000229330 FCMRO60667 390 aa12.6□□□□□ -0.39
HCFC2-201ENST00000229330 GLSO94925 669 aaPredicted RBP12.6□□□□□ -0.39
HCFC2-201ENST00000229330 PVRP15151 417 aa12.6□□□□□ -0.39
HCFC2-201ENST00000229330 DVL1P1P54792 670 aaPredicted RBP12.6□□□□□ -0.39
HCFC2-201ENST00000229330 SMAD2Q15796 467 aaKnown RBP12.6□□□□□ -0.39
HCFC2-201ENST00000229330 RNF165Q6ZSG1 346 aa12.6□□□□□ -0.39
HCFC2-201ENST00000229330 FAM58AQ8N1B3 248 aa12.6□□□□□ -0.39
HCFC2-201ENST00000229330 BANF2Q9H503 90 aa12.6□□□□□ -0.39
HCFC2-201ENST00000229330 DUSP22Q9NRW4 184 aa12.6□□□□□ -0.39
HCFC2-201ENST00000229330 TMEM30AQ9NV96 361 aa12.6□□□□□ -0.39
HCFC2-201ENST00000229330 NXT1Q9UKK6 140 aaKnown RBP12.6□□□□□ -0.39
HCFC2-201ENST00000229330 AP4M1O00189 453 aa12.6□□□□□ -0.39
HCFC2-201ENST00000229330 IRF3Q14653 427 aa12.6□□□□□ -0.39
HCFC2-201ENST00000229330 GUK1Q16774 197 aa12.6□□□□□ -0.39
HCFC2-201ENST00000229330 TUSC1Q2TAM9 212 aa12.6□□□□□ -0.39
HCFC2-201ENST00000229330 TMEM31Q5JXX7 168 aa12.6□□□□□ -0.39
HCFC2-201ENST00000229330 MOB3CQ70IA8 216 aa12.6□□□□□ -0.39
HCFC2-201ENST00000229330 RTL10Q7L3V2 364 aa12.6□□□□□ -0.39
HCFC2-201ENST00000229330 CBLN2Q8IUK8 224 aa12.6□□□□□ -0.39
HCFC2-201ENST00000229330 LOC107986453A0A1B0GWG9 222 aa12.6□□□□□ -0.39
HCFC2-201ENST00000229330 OR6C68A6NDL8 312 aa12.6□□□□□ -0.39
HCFC2-201ENST00000229330 ZNF727A8MUV8 499 aa12.6□□□□□ -0.39
HCFC2-201ENST00000229330 FTCDNL1E5RQL4 147 aa12.6□□□□□ -0.39
HCFC2-201ENST00000229330 SULT2B1O00204 365 aa12.6□□□□□ -0.39
HCFC2-201ENST00000229330 AVPR2P30518 371 aa12.6□□□□□ -0.39
HCFC2-201ENST00000229330 RFC3P40938 356 aa12.6□□□□□ -0.39
HCFC2-201ENST00000229330 RNLSQ5VYX0 342 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms