RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 TNFSF14O43557 240 aa12.71□□□□□ -0.37
SF1-201ENST00000227503 LDB3O75112 727 aa12.71□□□□□ -0.37
SF1-201ENST00000227503 UPK3AO75631 287 aa12.71□□□□□ -0.37
SF1-201ENST00000227503 TPT1P13693 172 aaKnown RBP12.71□□□□□ -0.37
SF1-201ENST00000227503 MAP3K8P41279 467 aa12.71□□□□□ -0.37
SF1-201ENST00000227503 LPAR6P43657 344 aa12.71□□□□□ -0.37
SF1-201ENST00000227503 ADPRHP54922 357 aa12.71□□□□□ -0.37
SF1-201ENST00000227503 SEC13P55735 322 aa12.71□□□□□ -0.37
SF1-201ENST00000227503 ALKBH1Q13686 389 aaKnown RBP12.71□□□□□ -0.37
SF1-201ENST00000227503 GAS6Q14393 721 aa12.71□□□□□ -0.37
SF1-201ENST00000227503 VWA2Q5GFL6 755 aa12.71□□□□□ -0.37
SF1-201ENST00000227503 DHRS11Q6UWP2 260 aa12.71□□□□□ -0.37
SF1-201ENST00000227503 ABHD13Q7L211 337 aa12.71□□□□□ -0.37
SF1-201ENST00000227503 SKA3Q8IX90 412 aa12.71□□□□□ -0.37
SF1-201ENST00000227503 COX18Q8N8Q8 333 aa12.71□□□□□ -0.37
SF1-201ENST00000227503 ZSCAN4Q8NAM6 433 aaPredicted RBP12.71□□□□□ -0.37
SF1-201ENST00000227503 TMEM52Q8NDY8 209 aa12.71□□□□□ -0.37
SF1-201ENST00000227503 CCL4L1Q8NHW4 92 aa12.71□□□□□ -0.37
SF1-201ENST00000227503 RNF141Q8WVD5 230 aa12.71□□□□□ -0.37
SF1-201ENST00000227503 TSEN15Q8WW01 171 aaKnown RBP12.71□□□□□ -0.37
SF1-201ENST00000227503 FAM3DQ96BQ1 224 aa12.71□□□□□ -0.37
SF1-201ENST00000227503 ALG12Q9BV10 488 aa12.71□□□□□ -0.37
SF1-201ENST00000227503 TWSG1Q9GZX9 223 aa12.71□□□□□ -0.37
SF1-201ENST00000227503 LRRC72A6NJI9 287 aa12.71□□□□□ -0.38
SF1-201ENST00000227503 GATCO43716 136 aaKnown RBP12.71□□□□□ -0.38
SF1-201ENST00000227503 FGF17O60258 216 aa12.71□□□□□ -0.38
SF1-201ENST00000227503 HEXAP06865 529 aa12.71□□□□□ -0.38
SF1-201ENST00000227503 FBP1P09467 338 aa12.71□□□□□ -0.38
SF1-201ENST00000227503 IL13RA1P78552 427 aa12.71□□□□□ -0.38
SF1-201ENST00000227503 PARGQ86W56 976 aa12.71□□□□□ -0.38
SF1-201ENST00000227503 CDRT4Q8N9R6 151 aa12.71□□□□□ -0.38
SF1-201ENST00000227503 PHOSPHO2Q8TCD6 241 aa12.71□□□□□ -0.38
SF1-201ENST00000227503 FOXRED1Q96CU9 486 aaPredicted RBP12.71□□□□□ -0.38
SF1-201ENST00000227503 CMBLQ96DG6 245 aa12.71□□□□□ -0.38
SF1-201ENST00000227503 STACQ99469 402 aa12.71□□□□□ -0.38
SF1-201ENST00000227503 POTEKPQ9BYX7 375 aa12.71□□□□□ -0.38
SF1-201ENST00000227503 SMCO4Q9NRQ5 59 aa12.71□□□□□ -0.38
SF1-201ENST00000227503 CYTL1Q9NRR1 136 aa12.71□□□□□ -0.38
SF1-201ENST00000227503 ASH2LQ9UBL3 628 aa12.71□□□□□ -0.38
SF1-201ENST00000227503 PILRAQ9UKJ1 303 aa12.71□□□□□ -0.38
SF1-201ENST00000227503 TRIOO75962 3097 aa12.7□□□□□ -0.38
SF1-201ENST00000227503 A0A087WV62 115 aa12.7□□□□□ -0.38
SF1-201ENST00000227503 H0YIZ8 118 aa12.7□□□□□ -0.38
SF1-201ENST00000227503 SOX1O00570 391 aaPredicted RBP12.7□□□□□ -0.38
SF1-201ENST00000227503 ZNF735P0CB33 412 aa12.7□□□□□ -0.38
SF1-201ENST00000227503 KIR2DL1P43626 348 aaPredicted RBP12.7□□□□□ -0.38
SF1-201ENST00000227503 MGAT2Q10469 447 aa12.7□□□□□ -0.38
SF1-201ENST00000227503 ZNF585AQ6P3V2 769 aa12.7□□□□□ -0.38
SF1-201ENST00000227503 PRSS41Q7RTY9 318 aa12.7□□□□□ -0.38
SF1-201ENST00000227503 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.7□□□□□ -0.38
SF1-201ENST00000227503 FOXRED2Q8IWF2 684 aa12.7□□□□□ -0.38
SF1-201ENST00000227503 FAM24BQ8N5W8 94 aa12.7□□□□□ -0.38
SF1-201ENST00000227503 GPX8Q8TED1 209 aa12.7□□□□□ -0.38
SF1-201ENST00000227503 SLC22A18Q96BI1 424 aa12.7□□□□□ -0.38
SF1-201ENST00000227503 AMELYQ99218 206 aa12.7□□□□□ -0.38
SF1-201ENST00000227503 GGACTQ9BVM4 153 aa12.7□□□□□ -0.38
SF1-201ENST00000227503 RXFP3Q9NSD7 469 aa12.7□□□□□ -0.38
SF1-201ENST00000227503 KLK13Q9UKR3 277 aa12.7□□□□□ -0.38
SF1-201ENST00000227503 TBC1D3DA0A087WVF3 549 aa12.7□□□□□ -0.38
SF1-201ENST00000227503 TBC1D3IA0A087WXS9 549 aa12.7□□□□□ -0.38
SF1-201ENST00000227503 TBC1D3LB9A6J9 549 aa12.7□□□□□ -0.38
SF1-201ENST00000227503 BLOC1S5-TXNDC5H3BN57 136 aa12.7□□□□□ -0.38
SF1-201ENST00000227503 TBC1D3HP0C7X1 549 aa12.7□□□□□ -0.38
SF1-201ENST00000227503 SERPINF1P36955 418 aa12.7□□□□□ -0.38
SF1-201ENST00000227503 CDKN2AP42771 156 aaKnown RBP12.7□□□□□ -0.38
SF1-201ENST00000227503 TAS2R19P59542 299 aa12.7□□□□□ -0.38
SF1-201ENST00000227503 CXADRP78310 365 aa12.7□□□□□ -0.38
SF1-201ENST00000227503 FAM53BQ14153 422 aa12.7□□□□□ -0.38
SF1-201ENST00000227503 KIR2DS3Q14952 304 aa12.7□□□□□ -0.38
SF1-201ENST00000227503 TBC1D3CQ6IPX1 549 aa12.7□□□□□ -0.38
SF1-201ENST00000227503 UNQ6494/PRO21346Q6UXR6 183 aa12.7□□□□□ -0.38
SF1-201ENST00000227503 TBC1D3Q8IZP1 549 aaPredicted RBP12.7□□□□□ -0.38
SF1-201ENST00000227503 MRGPRFQ96AM1 343 aa12.7□□□□□ -0.38
SF1-201ENST00000227503 CHMP1AQ9HD42 196 aaPredicted RBP12.7□□□□□ -0.38
SF1-201ENST00000227503 UPB1Q9UBR1 384 aa12.7□□□□□ -0.38
SF1-201ENST00000227503 ZNF736B4DX44 427 aaPredicted RBP12.69□□□□□ -0.38
SF1-201ENST00000227503 K7EQS6 105 aa12.69□□□□□ -0.38
SF1-201ENST00000227503 BRINP1O60477 761 aa12.69□□□□□ -0.38
SF1-201ENST00000227503 LRP3O75074 770 aa12.69□□□□□ -0.38
SF1-201ENST00000227503 FBXO24O75426 580 aa12.69□□□□□ -0.38
SF1-201ENST00000227503 CT62P0C5K7 136 aa12.69□□□□□ -0.38
SF1-201ENST00000227503 ACKR3P25106 362 aa12.69□□□□□ -0.38
SF1-201ENST00000227503 TSC22D1Q15714 1073 aa12.69□□□□□ -0.38
SF1-201ENST00000227503 PRICKLE4Q2TBC4 344 aa12.69□□□□□ -0.38
SF1-201ENST00000227503 CDNFQ49AH0 187 aa12.69□□□□□ -0.38
SF1-201ENST00000227503 FAM220AQ7Z4H9 259 aa12.69□□□□□ -0.38
SF1-201ENST00000227503 ACBD4Q8NC06 268 aa12.69□□□□□ -0.38
SF1-201ENST00000227503 FAM174AQ8TBP5 190 aa12.69□□□□□ -0.38
SF1-201ENST00000227503 WDR76Q9H967 626 aa12.69□□□□□ -0.38
SF1-201ENST00000227503 RNF122Q9H9V4 155 aa12.69□□□□□ -0.38
SF1-201ENST00000227503 LYRM4Q9HD34 91 aa12.69□□□□□ -0.38
SF1-201ENST00000227503 KCNG2Q9UJ96 466 aa12.69□□□□□ -0.38
SF1-201ENST00000227503 SLC22A13Q9Y226 551 aa12.69□□□□□ -0.38
SF1-201ENST00000227503 A0A0B4J2E0 115 aa12.69□□□□□ -0.38
SF1-201ENST00000227503 A0A1B0GX12 115 aa12.69□□□□□ -0.38
SF1-201ENST00000227503 OIP5O43482 229 aa12.69□□□□□ -0.38
SF1-201ENST00000227503 MED6O75586 246 aa12.69□□□□□ -0.38
SF1-201ENST00000227503 NDUFB2O95178 105 aa12.69□□□□□ -0.38
SF1-201ENST00000227503 CYB5AP00167 134 aa12.69□□□□□ -0.38
SF1-201ENST00000227503 LSSP48449 732 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms