RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 PPM1FP49593 454 aaPredicted RBP11.94□□□□□ -0.5
SRP54-201ENST00000216774 PMPCAQ10713 525 aa11.94□□□□□ -0.5
SRP54-201ENST00000216774 ETFDHQ16134 617 aa11.94□□□□□ -0.5
SRP54-201ENST00000216774 GALNT16Q8N428 558 aa11.94□□□□□ -0.5
SRP54-201ENST00000216774 OR13C3Q8NGS6 347 aa11.94□□□□□ -0.5
SRP54-201ENST00000216774 DAZLQ92904 295 aaKnown RBP11.94□□□□□ -0.5
SRP54-201ENST00000216774 DNAJA3Q96EY1 480 aa11.94□□□□□ -0.5
SRP54-201ENST00000216774 ZDHHC12Q96GR4 267 aa11.94□□□□□ -0.5
SRP54-201ENST00000216774 TINAGL1Q9GZM7 467 aaPredicted RBP11.94□□□□□ -0.5
SRP54-201ENST00000216774 WWTR1Q9GZV5 400 aa11.94□□□□□ -0.5
SRP54-201ENST00000216774 RAB33BQ9H082 229 aa11.94□□□□□ -0.5
SRP54-201ENST00000216774 COL5A1P20908 1838 aaPredicted RBP11.94□□□□□ -0.5
SRP54-201ENST00000216774 A0A1B0GTI1 187 aa11.94□□□□□ -0.5
SRP54-201ENST00000216774 CDC14CA4D256 554 aa11.94□□□□□ -0.5
SRP54-201ENST00000216774 A6NIZ1 184 aa11.94□□□□□ -0.5
SRP54-201ENST00000216774 C17orf51A8MQB3 221 aa11.94□□□□□ -0.5
SRP54-201ENST00000216774 D6RAR5 112 aa11.94□□□□□ -0.5
SRP54-201ENST00000216774 H3BMH7 237 aa11.94□□□□□ -0.5
SRP54-201ENST00000216774 OR2T1O43869 369 aa11.94□□□□□ -0.5
SRP54-201ENST00000216774 WISP1O95388 367 aa11.94□□□□□ -0.5
SRP54-201ENST00000216774 AHSA1O95433 338 aa11.94□□□□□ -0.5
SRP54-201ENST00000216774 HPP00738 406 aa11.94□□□□□ -0.5
SRP54-201ENST00000216774 FCER2P06734 321 aa11.94□□□□□ -0.5
SRP54-201ENST00000216774 ZNF735P0CB33 412 aa11.94□□□□□ -0.5
SRP54-201ENST00000216774 NME1P15531 152 aaKnown RBP11.94□□□□□ -0.5
SRP54-201ENST00000216774 RAB6AP20340 208 aa11.94□□□□□ -0.5
SRP54-201ENST00000216774 ARRB1P49407 418 aaPredicted RBP11.94□□□□□ -0.5
SRP54-201ENST00000216774 SLC26A5P58743 744 aa11.94□□□□□ -0.5
SRP54-201ENST00000216774 RAP1BP61224 184 aa11.94□□□□□ -0.5
SRP54-201ENST00000216774 RAP1AP62834 184 aa11.94□□□□□ -0.5
SRP54-201ENST00000216774 ZP2Q05996 745 aa11.94□□□□□ -0.5
SRP54-201ENST00000216774 MEF2DQ14814 521 aa11.94□□□□□ -0.5
SRP54-201ENST00000216774 ATPAF1Q5TC12 328 aaPredicted RBP11.94□□□□□ -0.5
SRP54-201ENST00000216774 ZNF704Q6ZNC4 412 aaPredicted RBP11.94□□□□□ -0.5
SRP54-201ENST00000216774 TMED4Q7Z7H5 227 aa11.94□□□□□ -0.5
SRP54-201ENST00000216774 ZNF546Q86UE3 836 aa11.94□□□□□ -0.5
SRP54-201ENST00000216774 STEAP2Q8NFT2 490 aa11.94□□□□□ -0.5
SRP54-201ENST00000216774 OR5M8Q8NGP6 311 aa11.94□□□□□ -0.5
SRP54-201ENST00000216774 GPR119Q8TDV5 335 aa11.94□□□□□ -0.5
SRP54-201ENST00000216774 FOXRED1Q96CU9 486 aaPredicted RBP11.94□□□□□ -0.5
SRP54-201ENST00000216774 COPS7AQ9UBW8 275 aa11.94□□□□□ -0.5
SRP54-201ENST00000216774 RANBP2P49792 3224 aaKnown RBP11.94□□□□□ -0.5
SRP54-201ENST00000216774 TMEM200CA6NKL6 621 aa11.93□□□□□ -0.5
SRP54-201ENST00000216774 M0QYG6 137 aa11.93□□□□□ -0.5
SRP54-201ENST00000216774 ATXN8OSP0DMR3 200 aa11.93□□□□□ -0.5
SRP54-201ENST00000216774 ABCD3P28288 659 aa11.93□□□□□ -0.5
SRP54-201ENST00000216774 ZNF345Q14585 488 aa11.93□□□□□ -0.5
SRP54-201ENST00000216774 PCK2Q16822 640 aa11.93□□□□□ -0.5
SRP54-201ENST00000216774 PHF19Q5T6S3 580 aa11.93□□□□□ -0.5
SRP54-201ENST00000216774 RAB12Q6IQ22 244 aa11.93□□□□□ -0.5
SRP54-201ENST00000216774 TFAP2EQ6VUC0 442 aa11.93□□□□□ -0.5
SRP54-201ENST00000216774 SLC29A4Q7RTT9 530 aa11.93□□□□□ -0.5
SRP54-201ENST00000216774 C17orf82Q86X59 251 aaPredicted RBP11.93□□□□□ -0.5
SRP54-201ENST00000216774 BEST3Q8N1M1 668 aa11.93□□□□□ -0.5
SRP54-201ENST00000216774 OR6S1Q8NH40 331 aa11.93□□□□□ -0.5
SRP54-201ENST00000216774 ST8SIA4Q92187 359 aa11.93□□□□□ -0.5
SRP54-201ENST00000216774 SLC2A8Q9NY64 477 aa11.93□□□□□ -0.5
SRP54-201ENST00000216774 CGGBP1Q9UFW8 167 aaPredicted RBP11.93□□□□□ -0.5
SRP54-201ENST00000216774 GPN3Q9UHW5 284 aaPredicted RBP11.93□□□□□ -0.5
SRP54-201ENST00000216774 MSRAQ9UJ68 235 aa11.93□□□□□ -0.5
SRP54-201ENST00000216774 COA3Q9Y2R0 106 aaPredicted RBP11.93□□□□□ -0.5
SRP54-201ENST00000216774 EMC9Q9Y3B6 208 aa11.93□□□□□ -0.5
SRP54-201ENST00000216774 CPAMD8Q8IZJ3 1885 aa11.93□□□□□ -0.5
SRP54-201ENST00000216774 LOC107986453A0A1B0GWG9 222 aa11.93□□□□□ -0.5
SRP54-201ENST00000216774 DCDC2BA2VCK2 349 aa11.93□□□□□ -0.5
SRP54-201ENST00000216774 OR6C76A6NM76 312 aa11.93□□□□□ -0.5
SRP54-201ENST00000216774 TRIM77I1YAP6 450 aa11.93□□□□□ -0.5
SRP54-201ENST00000216774 TSPAN4O14817 238 aa11.93□□□□□ -0.5
SRP54-201ENST00000216774 FADS1O60427 444 aa11.93□□□□□ -0.5
SRP54-201ENST00000216774 SPDEFO95238 335 aa11.93□□□□□ -0.5
SRP54-201ENST00000216774 RLN2P04090 185 aa11.93□□□□□ -0.5
SRP54-201ENST00000216774 MPZP25189 248 aa11.93□□□□□ -0.5
SRP54-201ENST00000216774 DHRS2Q13268 280 aa11.93□□□□□ -0.5
SRP54-201ENST00000216774 BTN1A1Q13410 526 aa11.93□□□□□ -0.5
SRP54-201ENST00000216774 ZMYND11Q15326 602 aa11.93□□□□□ -0.5
SRP54-201ENST00000216774 NR0B2Q15466 257 aa11.93□□□□□ -0.5
SRP54-201ENST00000216774 PAPD4Q6PIY7 484 aaKnown RBP11.93□□□□□ -0.5
SRP54-201ENST00000216774 DNM1P34Q6PK57 102 aa11.93□□□□□ -0.5
SRP54-201ENST00000216774 DEGS2Q6QHC5 323 aa11.93□□□□□ -0.5
SRP54-201ENST00000216774 MDGA2Q7Z553 956 aa11.93□□□□□ -0.5
SRP54-201ENST00000216774 LYPD6Q86Y78 171 aa11.93□□□□□ -0.5
SRP54-201ENST00000216774 ZNF584Q8IVC4 421 aa11.93□□□□□ -0.5
SRP54-201ENST00000216774 BPIFB2Q8N4F0 458 aa11.93□□□□□ -0.5
SRP54-201ENST00000216774 JAGN1Q8N5M9 183 aa11.93□□□□□ -0.5
SRP54-201ENST00000216774 SLC26A10Q8NG04 563 aa11.93□□□□□ -0.5
SRP54-201ENST00000216774 OR51A2Q8NGJ7 313 aa11.93□□□□□ -0.5
SRP54-201ENST00000216774 OR1J2Q8NGS2 313 aa11.93□□□□□ -0.5
SRP54-201ENST00000216774 LMX1AQ8TE12 382 aa11.93□□□□□ -0.5
SRP54-201ENST00000216774 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.93□□□□□ -0.5
SRP54-201ENST00000216774 CMKLR1Q99788 373 aa11.93□□□□□ -0.5
SRP54-201ENST00000216774 NKX3-1Q99801 234 aaPredicted RBP11.93□□□□□ -0.5
SRP54-201ENST00000216774 PRRT1Q99946 306 aa11.93□□□□□ -0.5
SRP54-201ENST00000216774 DNTTIP1Q9H147 329 aa11.93□□□□□ -0.5
SRP54-201ENST00000216774 G6PC2Q9NQR9 355 aa11.93□□□□□ -0.5
SRP54-201ENST00000216774 CYB5R1Q9UHQ9 305 aa11.93□□□□□ -0.5
SRP54-201ENST00000216774 OR52A1Q9UKL2 312 aa11.93□□□□□ -0.5
SRP54-201ENST00000216774 TDRD6O60522 2096 aaKnown RBP11.92□□□□□ -0.5
SRP54-201ENST00000216774 OR5H14A6NHG9 310 aa11.92□□□□□ -0.5
SRP54-201ENST00000216774 DISC1C4P0D8 188 aa11.92□□□□□ -0.5
SRP54-201ENST00000216774 SLC25A4P12235 298 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms