RNA–Protein interactions for RNA: ENST00000201963.3

DNMT3B-201, Transcript of DNA methyltransferase 3 beta, humanhuman

TSL 1 (best) BASIC

Gene DNMT3B, Length 4,255 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-201ENST00000201963 ZNF236Q9UL36 1845 aa10.51□□□□□ -0.73
DNMT3B-201ENST00000201963 H3BML4 177 aa10.51□□□□□ -0.73
DNMT3B-201ENST00000201963 CDC42EP2O14613 210 aa10.51□□□□□ -0.73
DNMT3B-201ENST00000201963 IMPA2O14732 288 aa10.51□□□□□ -0.73
DNMT3B-201ENST00000201963 NSA2O95478 260 aaKnown RBP10.51□□□□□ -0.73
DNMT3B-201ENST00000201963 IGF2P01344 180 aa10.51□□□□□ -0.73
DNMT3B-201ENST00000201963 GALP22466 123 aa10.51□□□□□ -0.73
DNMT3B-201ENST00000201963 FOXC1Q12948 553 aa10.51□□□□□ -0.73
DNMT3B-201ENST00000201963 NPAS1Q99742 590 aa10.51□□□□□ -0.73
DNMT3B-201ENST00000201963 ZNF442Q9H7R0 627 aa10.51□□□□□ -0.73
DNMT3B-201ENST00000201963 SLC22A11Q9NSA0 550 aa10.51□□□□□ -0.73
DNMT3B-201ENST00000201963 PISDQ9UG56 409 aa10.51□□□□□ -0.73
DNMT3B-201ENST00000201963 PLEKHM1Q9Y4G2 1056 aa10.51□□□□□ -0.73
DNMT3B-201ENST00000201963 KPTNQ9Y664 436 aa10.51□□□□□ -0.73
DNMT3B-201ENST00000201963 ZNF705FA8MVS1 300 aaPredicted RBP10.5□□□□□ -0.73
DNMT3B-201ENST00000201963 GCM2O75603 506 aaPredicted RBP10.5□□□□□ -0.73
DNMT3B-201ENST00000201963 CD160O95971 181 aa10.5□□□□□ -0.73
DNMT3B-201ENST00000201963 ZNF705DP0CH99 300 aaPredicted RBP10.5□□□□□ -0.73
DNMT3B-201ENST00000201963 ZNF705BP0CI00 300 aaPredicted RBP10.5□□□□□ -0.73
DNMT3B-201ENST00000201963 MECP2P51608 486 aaKnown RBP10.5□□□□□ -0.73
DNMT3B-201ENST00000201963 HIST2H3PS2Q5TEC6 136 aa10.5□□□□□ -0.73
DNMT3B-201ENST00000201963 WBP2NLQ6ICG8 309 aa10.5□□□□□ -0.73
DNMT3B-201ENST00000201963 RABEPKQ7Z6M1 372 aa10.5□□□□□ -0.73
DNMT3B-201ENST00000201963 ADGRE4PQ86SQ3 457 aa10.5□□□□□ -0.73
DNMT3B-201ENST00000201963 SPICQ8N5J4 248 aa10.5□□□□□ -0.73
DNMT3B-201ENST00000201963 OR5M9Q8NGP3 310 aa10.5□□□□□ -0.73
DNMT3B-201ENST00000201963 NUDCD2Q8WVJ2 157 aa10.5□□□□□ -0.73
DNMT3B-201ENST00000201963 PATE1Q8WXA2 126 aa10.5□□□□□ -0.73
DNMT3B-201ENST00000201963 HIST1H2AAQ96QV6 131 aa10.5□□□□□ -0.73
DNMT3B-201ENST00000201963 TINAGL1Q9GZM7 467 aaPredicted RBP10.5□□□□□ -0.73
DNMT3B-201ENST00000201963 LRIT1Q9P2V4 623 aa10.5□□□□□ -0.73
DNMT3B-201ENST00000201963 FAM230AA0A1W2PPH8 454 aa10.5□□□□□ -0.73
DNMT3B-201ENST00000201963 SMCO3A2RU48 225 aa10.5□□□□□ -0.73
DNMT3B-201ENST00000201963 CDC14CA4D256 554 aa10.5□□□□□ -0.73
DNMT3B-201ENST00000201963 H0YGG7 62 aa10.5□□□□□ -0.73
DNMT3B-201ENST00000201963 K7EQS6 105 aa10.5□□□□□ -0.73
DNMT3B-201ENST00000201963 DCTN6O00399 190 aa10.5□□□□□ -0.73
DNMT3B-201ENST00000201963 NMBP08949 121 aa10.5□□□□□ -0.73
DNMT3B-201ENST00000201963 TACR3P29371 465 aa10.5□□□□□ -0.73
DNMT3B-201ENST00000201963 KCNAB1Q14722 419 aa10.5□□□□□ -0.73
DNMT3B-201ENST00000201963 RNF212Q495C1 297 aa10.5□□□□□ -0.73
DNMT3B-201ENST00000201963 MANEAQ5SRI9 462 aa10.5□□□□□ -0.73
DNMT3B-201ENST00000201963 SLC22A25Q6T423 547 aa10.5□□□□□ -0.73
DNMT3B-201ENST00000201963 CD300LDQ6UXZ3 194 aa10.5□□□□□ -0.73
DNMT3B-201ENST00000201963 MFSD9Q8NBP5 474 aa10.5□□□□□ -0.73
DNMT3B-201ENST00000201963 RAB3CQ96E17 227 aa10.5□□□□□ -0.73
DNMT3B-201ENST00000201963 STRADBQ9C0K7 418 aa10.5□□□□□ -0.73
DNMT3B-201ENST00000201963 COL6A6A6NMZ7 2263 aa10.5□□□□□ -0.73
DNMT3B-201ENST00000201963 RBBP6Q7Z6E9 1792 aaKnown RBP10.5□□□□□ -0.73
DNMT3B-201ENST00000201963 A0A0B4J293 547 aa10.5□□□□□ -0.73
DNMT3B-201ENST00000201963 IDSB3KWA1 339 aa10.5□□□□□ -0.73
DNMT3B-201ENST00000201963 GLI4P10075 376 aa10.5□□□□□ -0.73
DNMT3B-201ENST00000201963 SDHAP31040 664 aa10.5□□□□□ -0.73
DNMT3B-201ENST00000201963 TLE3Q04726 772 aa10.5□□□□□ -0.73
DNMT3B-201ENST00000201963 HMGN3Q15651 99 aa10.5□□□□□ -0.73
DNMT3B-201ENST00000201963 ZNF626Q68DY1 528 aa10.5□□□□□ -0.73
DNMT3B-201ENST00000201963 THSD4Q6ZMP0 1018 aa10.5□□□□□ -0.73
DNMT3B-201ENST00000201963 Q6ZRG5 221 aa10.5□□□□□ -0.73
DNMT3B-201ENST00000201963 CLCC1Q96S66 551 aa10.5□□□□□ -0.73
DNMT3B-201ENST00000201963 FAM96BQ9Y3D0 163 aa10.5□□□□□ -0.73
DNMT3B-201ENST00000201963 IGLV3-16A0A075B6K0 115 aa10.5□□□□□ -0.73
DNMT3B-201ENST00000201963 A0A087WZY1 265 aa10.5□□□□□ -0.73
DNMT3B-201ENST00000201963 P2RY10O00398 339 aa10.5□□□□□ -0.73
DNMT3B-201ENST00000201963 DUX1O43812 170 aa10.5□□□□□ -0.73
DNMT3B-201ENST00000201963 NME2P1O60361 137 aa10.5□□□□□ -0.73
DNMT3B-201ENST00000201963 ZNF354AO60765 605 aaPredicted RBP10.5□□□□□ -0.73
DNMT3B-201ENST00000201963 PMPCAQ10713 525 aa10.5□□□□□ -0.73
DNMT3B-201ENST00000201963 SLC35D3Q5M8T2 416 aa10.5□□□□□ -0.73
DNMT3B-201ENST00000201963 C11orf87Q6NUJ2 197 aa10.5□□□□□ -0.73
DNMT3B-201ENST00000201963 LINC00346Q8IVM7 164 aa10.5□□□□□ -0.73
DNMT3B-201ENST00000201963 GALNT16Q8N428 558 aa10.5□□□□□ -0.73
DNMT3B-201ENST00000201963 OR4D6Q8NGJ1 314 aa10.5□□□□□ -0.73
DNMT3B-201ENST00000201963 MR1Q95460 341 aa10.5□□□□□ -0.73
DNMT3B-201ENST00000201963 FGF22Q9HCT0 170 aa10.5□□□□□ -0.73
DNMT3B-201ENST00000201963 SLC23A2Q9UGH3 650 aa10.5□□□□□ -0.73
DNMT3B-201ENST00000201963 PCDHGA9Q9Y5G4 932 aaKnown RBP10.5□□□□□ -0.73
DNMT3B-201ENST00000201963 PRSS38A1L453 326 aa10.49□□□□□ -0.73
DNMT3B-201ENST00000201963 ZFPL1O95159 310 aa10.49□□□□□ -0.73
DNMT3B-201ENST00000201963 CTSLP07711 333 aa10.49□□□□□ -0.73
DNMT3B-201ENST00000201963 THBS1P07996 1170 aa10.49□□□□□ -0.73
DNMT3B-201ENST00000201963 GABRR1P24046 479 aa10.49□□□□□ -0.73
DNMT3B-201ENST00000201963 SLC36A2Q495M3 483 aa10.49□□□□□ -0.73
DNMT3B-201ENST00000201963 DND1Q8IYX4 353 aaKnown RBP10.49□□□□□ -0.73
DNMT3B-201ENST00000201963 ASB17Q8WXJ9 295 aa10.49□□□□□ -0.73
DNMT3B-201ENST00000201963 FGGYQ96C11 551 aa10.49□□□□□ -0.73
DNMT3B-201ENST00000201963 METTL7AQ9H8H3 244 aa10.49□□□□□ -0.73
DNMT3B-201ENST00000201963 TMEM9BQ9NQ34 198 aa10.49□□□□□ -0.73
DNMT3B-201ENST00000201963 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.49□□□□□ -0.73
DNMT3B-201ENST00000201963 OR5V1Q9UGF6 321 aa10.49□□□□□ -0.73
DNMT3B-201ENST00000201963 OPN4Q9UHM6 478 aa10.49□□□□□ -0.73
DNMT3B-201ENST00000201963 SLC22A13Q9Y226 551 aa10.49□□□□□ -0.73
DNMT3B-201ENST00000201963 PCYT1BQ9Y5K3 369 aaPredicted RBP10.49□□□□□ -0.73
DNMT3B-201ENST00000201963 SERINC4A6NH21 518 aa10.49□□□□□ -0.73
DNMT3B-201ENST00000201963 F5H5K5 113 aa10.49□□□□□ -0.73
DNMT3B-201ENST00000201963 XRCC3O43542 346 aa10.49□□□□□ -0.73
DNMT3B-201ENST00000201963 DUSP8Q13202 625 aa10.49□□□□□ -0.73
DNMT3B-201ENST00000201963 ZNF561Q8N587 486 aa10.49□□□□□ -0.73
DNMT3B-201ENST00000201963 GLYATL2Q8WU03 294 aa10.49□□□□□ -0.73
DNMT3B-201ENST00000201963 HGDQ93099 445 aa10.49□□□□□ -0.73
DNMT3B-201ENST00000201963 TMEM59Q9BXS4 323 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms