RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 LDB2O43679 373 aa5.59□□□□□ -1.51
VPS13D-201ENST00000011700 FZD6O60353 706 aa5.59□□□□□ -1.51
VPS13D-201ENST00000011700 CLDN15P56746 228 aa5.59□□□□□ -1.51
VPS13D-201ENST00000011700 POU3F1Q03052 451 aaPredicted RBP5.59□□□□□ -1.51
VPS13D-201ENST00000011700 CLPPQ16740 277 aaPredicted RBP5.59□□□□□ -1.51
VPS13D-201ENST00000011700 LGALSLQ3ZCW2 172 aaPredicted RBP5.59□□□□□ -1.51
VPS13D-201ENST00000011700 LETMD1Q6P1Q0 360 aa5.59□□□□□ -1.51
VPS13D-201ENST00000011700 DEGS2Q6QHC5 323 aa5.59□□□□□ -1.51
VPS13D-201ENST00000011700 TMPRSS11FQ6ZWK6 438 aa5.59□□□□□ -1.51
VPS13D-201ENST00000011700 LINC00596Q86U02 117 aa5.59□□□□□ -1.51
VPS13D-201ENST00000011700 ZDHHC22Q8N966 263 aa5.59□□□□□ -1.51
VPS13D-201ENST00000011700 OR10Q1Q8NGQ4 319 aa5.59□□□□□ -1.51
VPS13D-201ENST00000011700 ZNF707Q96C28 371 aaPredicted RBP5.59□□□□□ -1.51
VPS13D-201ENST00000011700 TMEM56Q96MV1 263 aa5.59□□□□□ -1.51
VPS13D-201ENST00000011700 LMF1Q96S06 567 aa5.59□□□□□ -1.51
VPS13D-201ENST00000011700 CSNK1G1Q9HCP0 422 aa5.59□□□□□ -1.51
VPS13D-201ENST00000011700 PURGQ9UJV8 347 aaKnown RBP5.59□□□□□ -1.51
VPS13D-201ENST00000011700 DRGXA6NNA5 263 aa5.59□□□□□ -1.51
VPS13D-201ENST00000011700 HNRNPA3P51991 378 aaKnown RBP5.59□□□□□ -1.51
VPS13D-201ENST00000011700 OR5H6Q8NGV6 325 aa5.59□□□□□ -1.51
VPS13D-201ENST00000011700 NPRL2Q8WTW4 380 aa5.59□□□□□ -1.51
VPS13D-201ENST00000011700 POM121Q96HA1 1249 aa5.59□□□□□ -1.51
VPS13D-201ENST00000011700 OCIAD1Q9NX40 245 aa5.59□□□□□ -1.51
VPS13D-201ENST00000011700 CLDND1Q9NY35 253 aa5.59□□□□□ -1.51
VPS13D-201ENST00000011700 HSPB8Q9UJY1 196 aa5.59□□□□□ -1.51
VPS13D-201ENST00000011700 HRH3Q9Y5N1 445 aa5.59□□□□□ -1.51
VPS13D-201ENST00000011700 PUS1Q9Y606 427 aaKnown RBP eCLIP5.59□□□□□ -1.51
VPS13D-201ENST00000011700 ZNF888P0CJ79 500 aaPredicted RBP5.59□□□□□ -1.51
VPS13D-201ENST00000011700 PGA4P0DJD7 388 aa5.59□□□□□ -1.51
VPS13D-201ENST00000011700 PGA5P0DJD9 388 aa5.59□□□□□ -1.51
VPS13D-201ENST00000011700 SDC1P18827 310 aa5.59□□□□□ -1.51
VPS13D-201ENST00000011700 PMCHP20382 165 aa5.59□□□□□ -1.51
VPS13D-201ENST00000011700 GABRA4P48169 554 aa5.59□□□□□ -1.51
VPS13D-201ENST00000011700 PJVKQ0ZLH3 352 aa5.59□□□□□ -1.51
VPS13D-201ENST00000011700 TMEM184AQ6ZMB5 413 aa5.59□□□□□ -1.51
VPS13D-201ENST00000011700 HSD17B13Q7Z5P4 300 aaPredicted RBP5.59□□□□□ -1.51
VPS13D-201ENST00000011700 OR2G3Q8NGZ4 309 aa5.59□□□□□ -1.51
VPS13D-201ENST00000011700 SORT1Q99523 831 aa5.59□□□□□ -1.51
VPS13D-201ENST00000011700 FAAP24Q9BTP7 215 aa5.59□□□□□ -1.51
VPS13D-201ENST00000011700 COMMD5Q9GZQ3 224 aa5.59□□□□□ -1.51
VPS13D-201ENST00000011700 ERVMER34-1Q9H9K5 563 aa5.59□□□□□ -1.51
VPS13D-201ENST00000011700 CREBZFQ9NS37 354 aa5.59□□□□□ -1.51
VPS13D-201ENST00000011700 LPAR3Q9UBY5 353 aa5.59□□□□□ -1.51
VPS13D-201ENST00000011700 FLVCR2Q9UPI3 526 aa5.59□□□□□ -1.51
VPS13D-201ENST00000011700 VDAC3Q9Y277 283 aa5.59□□□□□ -1.51
VPS13D-201ENST00000011700 K7ERU9 68 aa5.59□□□□□ -1.51
VPS13D-201ENST00000011700 ZNF749O43361 778 aa5.59□□□□□ -1.51
VPS13D-201ENST00000011700 ZNF207O43670 478 aaKnown RBP5.59□□□□□ -1.51
VPS13D-201ENST00000011700 TIMM8AO60220 97 aaPredicted RBP5.59□□□□□ -1.51
VPS13D-201ENST00000011700 CPNE6O95741 557 aa5.59□□□□□ -1.51
VPS13D-201ENST00000011700 MBPP02686 304 aaPredicted RBP5.59□□□□□ -1.51
VPS13D-201ENST00000011700 CHRM5P08912 532 aaPredicted RBP5.59□□□□□ -1.51
VPS13D-201ENST00000011700 HERVK_113P61574 105 aa5.59□□□□□ -1.51
VPS13D-201ENST00000011700 RUNX3Q13761 415 aa5.59□□□□□ -1.51
VPS13D-201ENST00000011700 TAZQ16635 292 aa5.59□□□□□ -1.51
VPS13D-201ENST00000011700 IAH1Q2TAA2 248 aaPredicted RBP5.59□□□□□ -1.51
VPS13D-201ENST00000011700 ZNF766Q5HY98 468 aa5.59□□□□□ -1.51
VPS13D-201ENST00000011700 LYPD4Q6UWN0 246 aa5.59□□□□□ -1.51
VPS13D-201ENST00000011700 H1FNTQ75WM6 255 aaPredicted RBP5.59□□□□□ -1.51
VPS13D-201ENST00000011700 OR10P1Q8NGE3 313 aa5.59□□□□□ -1.51
VPS13D-201ENST00000011700 SLC38A5Q8WUX1 472 aa5.59□□□□□ -1.51
VPS13D-201ENST00000011700 INPP5KQ9BT40 448 aa5.59□□□□□ -1.51
VPS13D-201ENST00000011700 CTDSP1Q9GZU7 261 aa5.59□□□□□ -1.51
VPS13D-201ENST00000011700 SIRT7Q9NRC8 400 aa5.59□□□□□ -1.51
VPS13D-201ENST00000011700 IL17CQ9P0M4 197 aa5.59□□□□□ -1.51
VPS13D-201ENST00000011700 GIMAP2Q9UG22 337 aa5.59□□□□□ -1.51
VPS13D-201ENST00000011700 SH2D7A6NKC9 451 aaPredicted RBP5.59□□□□□ -1.52
VPS13D-201ENST00000011700 IL5P05113 134 aa5.59□□□□□ -1.52
VPS13D-201ENST00000011700 HMGN2P05204 90 aaKnown RBP5.59□□□□□ -1.52
VPS13D-201ENST00000011700 CTRB1P17538 263 aa5.59□□□□□ -1.52
VPS13D-201ENST00000011700 SERPINA2P20848 420 aa5.59□□□□□ -1.52
VPS13D-201ENST00000011700 COMPP49747 757 aaPredicted RBP5.59□□□□□ -1.52
VPS13D-201ENST00000011700 FAM53BQ14153 422 aa5.59□□□□□ -1.52
VPS13D-201ENST00000011700 SLC35G1Q2M3R5 365 aa5.59□□□□□ -1.52
VPS13D-201ENST00000011700 PABPC1L2AQ5JQF8 200 aa5.59□□□□□ -1.52
VPS13D-201ENST00000011700 PRAMEF20Q5VT98 475 aa5.59□□□□□ -1.52
VPS13D-201ENST00000011700 SHEQ5VZ18 495 aa5.59□□□□□ -1.52
VPS13D-201ENST00000011700 CTRB2Q6GPI1 263 aa5.59□□□□□ -1.52
VPS13D-201ENST00000011700 FCRLAQ7L513 359 aa5.59□□□□□ -1.52
VPS13D-201ENST00000011700 B3GNT8Q7Z7M8 397 aa5.59□□□□□ -1.52
VPS13D-201ENST00000011700 LMO3Q8TAP4 145 aa5.59□□□□□ -1.52
VPS13D-201ENST00000011700 C11orf40Q8WZ69 217 aa5.59□□□□□ -1.52
VPS13D-201ENST00000011700 BCL2L2Q92843 193 aaPredicted RBP5.59□□□□□ -1.52
VPS13D-201ENST00000011700 MRPL22Q9NWU5 206 aaKnown RBP5.59□□□□□ -1.52
VPS13D-201ENST00000011700 HMSDA8MTL9 139 aa5.59□□□□□ -1.52
VPS13D-201ENST00000011700 NCR1O76036 304 aa5.59□□□□□ -1.52
VPS13D-201ENST00000011700 PNPP00491 289 aa5.59□□□□□ -1.52
VPS13D-201ENST00000011700 TNFRSF1AP19438 455 aa5.59□□□□□ -1.52
VPS13D-201ENST00000011700 ERVS71-1P61550 626 aa5.59□□□□□ -1.52
VPS13D-201ENST00000011700 IKZF1Q13422 519 aa5.59□□□□□ -1.52
VPS13D-201ENST00000011700 MOGAT2Q3SYC2 334 aa5.59□□□□□ -1.52
VPS13D-201ENST00000011700 SFRP4Q6FHJ7 346 aaPredicted RBP5.59□□□□□ -1.52
VPS13D-201ENST00000011700 FBXO46Q6PJ61 603 aaPredicted RBP5.59□□□□□ -1.52
VPS13D-201ENST00000011700 OR52L2PQ8NGH6 319 aa5.59□□□□□ -1.52
VPS13D-201ENST00000011700 A0A1W2PQU0 124 aa5.58□□□□□ -1.52
VPS13D-201ENST00000011700 OR2M5A3KFT3 312 aa5.58□□□□□ -1.52
VPS13D-201ENST00000011700 TXNL1O43396 289 aa5.58□□□□□ -1.52
VPS13D-201ENST00000011700 BTG2P78543 158 aa5.58□□□□□ -1.52
VPS13D-201ENST00000011700 TEAD2Q15562 447 aa5.58□□□□□ -1.52
VPS13D-201ENST00000011700 PRICKLE2Q7Z3G6 844 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms