RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Olfr1170Q8VFG1 316 aa8.14□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Oosp1Q925U0 202 aa8.14□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Rnf141Q99MB7 230 aa8.14□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Slc25a11Q9CR62 314 aaKnown RBP8.14□□□□□ -1.11
Upf3b-201ENSMUST00000076265 MmabQ9D273 237 aa8.14□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Tmprss6Q9DBI0 811 aa8.14□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Vmn1r52Q9EP79 309 aa8.14□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Praf2Q9JIG8 178 aa8.14□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Hs3st3b1Q9QZS6 390 aa8.14□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Lama3Q61789 3330 aa8.14□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Rpl13a-ps1A0A140T8K2 203 aaKnown RBP8.13□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Vmn1r157E9Q069 297 aa8.13□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Olfr521E9Q519 321 aa8.13□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Vmn1r139E9Q8L6 297 aa8.13□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Adam3F8VQ03 822 aa8.13□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Vmn1r112G3UY48 297 aa8.13□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Nrp2O35375 931 aa8.13□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Adam10O35598 749 aa8.13□□□□□ -1.11
Upf3b-201ENSMUST00000076265 P01729 129 aa8.13□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Tcp1P11983 556 aaKnown RBP8.13□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Tmem35bQ3U0Y2 150 aa8.13□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Spata13Q5DU57 656 aa8.13□□□□□ -1.11
Upf3b-201ENSMUST00000076265 ShhQ62226 437 aa8.13□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Zfp92Q62396 488 aa8.13□□□□□ -1.11
Upf3b-201ENSMUST00000076265 PcnpQ6P8I4 178 aaKnown RBP8.13□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Olfr270Q7TS19 314 aa8.13□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Abhd13Q80UX8 337 aa8.13□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Il22ra1Q80XZ4 581 aa8.13□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Nabp1Q8BGW5 198 aa8.13□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Ccdc32Q8BS39 179 aa8.13□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Pqlc2Q8C4N4 293 aa8.13□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Myct1Q8R411 188 aa8.13□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Olfr1499Q8VG65 314 aa8.13□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Olfr161Q8VGB9 313 aa8.13□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Olfr1298Q8VGE6 312 aa8.13□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Olfr639Q8VGY8 316 aa8.13□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Atoh8Q99NA2 322 aa8.13□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Glipr1Q9CWG1 255 aa8.13□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Isca2Q9DCB8 154 aa8.13□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Ctnnbip1Q9JJN6 81 aa8.13□□□□□ -1.11
Upf3b-201ENSMUST00000076265 P2rx4Q9JJX6 388 aa8.13□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Rdh11Q9QYF1 316 aa8.13□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Rs1Q9Z1L4 224 aa8.13□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Mpeg1A1L314 713 aa8.13□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Zfr2E9Q5M4 874 aa8.13□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Colca2F8VPY8 239 aa8.13□□□□□ -1.11
Upf3b-201ENSMUST00000076265 P2rx6O54803 389 aa8.13□□□□□ -1.11
Upf3b-201ENSMUST00000076265 CaskO70589 926 aa8.13□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Ucp1P12242 307 aa8.13□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Rps15aP62245 130 aaKnown RBP8.13□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Lhx1P63006 406 aa8.13□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Krt86P97861 486 aa8.13□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Atp5a1Q03265 553 aaKnown RBP8.13□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Babam1Q3UI43 333 aa8.13□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Akr1clQ3UXL1 322 aa8.13□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Usp22Q5DU02 525 aa8.13□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Med26Q7TN02 588 aa8.13□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Clec4b1Q7TS58 209 aa8.13□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Gadl1Q80WP8 550 aa8.13□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Acsm5Q8BGA8 578 aa8.13□□□□□ -1.11
Upf3b-201ENSMUST00000076265 C8bQ8BH35 589 aa8.13□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Elp6Q8BK75 266 aa8.13□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Bpifb6Q8BU51 449 aa8.13□□□□□ -1.11
Upf3b-201ENSMUST00000076265 ShfQ8CG80 238 aa8.13□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Alg12Q8VDB2 486 aa8.13□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Tnk1Q99ML2 666 aa8.13□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Hcfc1r1Q9CYQ5 120 aa8.13□□□□□ -1.11
Upf3b-201ENSMUST00000076265 FtmtQ9D5H4 237 aa8.13□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Med8Q9D7W5 268 aa8.13□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Fam241bQ9D882 120 aa8.13□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Med27Q9DB40 311 aa8.13□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Rdh14Q9ERI6 334 aa8.13□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Myoz1Q9JK37 296 aa8.13□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Dusp13Q9QYJ7 198 aa8.13□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Ubxn8Q9QZ49 277 aa8.13□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Astn1Q61137 1302 aa8.13□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Gm44511A0A0N4SW10 223 aa8.12□□□□□ -1.11
Upf3b-201ENSMUST00000076265 DohhA0A1Y7VJ29 135 aa8.12□□□□□ -1.11
Upf3b-201ENSMUST00000076265 SmoktcrA2KF29 484 aa8.12□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Shisa8J3QNX5 399 aa8.12□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Sstr5O08858 362 aa8.12□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Chst3O88199 472 aa8.12□□□□□ -1.11
Upf3b-201ENSMUST00000076265 P01724 129 aa8.12□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Cd48P18181 240 aa8.12□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Klrb1bP27812 223 aa8.12□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Tbx5P70326 518 aa8.12□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Zfp51Q3U4L8 781 aa8.12□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Timm8a2Q4FZG7 97 aa8.12□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Olfr222Q7TS30 318 aa8.12□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Zfp790Q80ZX2 779 aa8.12□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Olfr70Q80ZX9 316 aa8.12□□□□□ -1.11
Upf3b-201ENSMUST00000076265 COA4Q8BT51 87 aa8.12□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Usp27Q8CEG8 438 aa8.12□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Olfr1317Q8VF84 316 aa8.12□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Pex16Q91XC9 336 aa8.12□□□□□ -1.11
Upf3b-201ENSMUST00000076265 4930544G11RikQ9CR99 193 aa8.12□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Emc4Q9CZX9 183 aa8.12□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Oma1Q9D8H7 521 aa8.12□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Cyp3a44Q9EQW4 504 aa8.12□□□□□ -1.11
Upf3b-201ENSMUST00000076265 Dll4Q9JI71 686 aa8.12□□□□□ -1.11
Retrieved 100 of 22,080 RNA–protein pairs in 46.3 ms