RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Sirpb1cK7N6K7 397 aa9.46□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Vmn1r159K7N701 305 aa9.46□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Ppt2O35448 302 aa9.46□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Lin7bO88951 207 aa9.46□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Hbb-yP02104 147 aa9.46□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Drd1Q61616 446 aa9.46□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Morn4Q6PGF2 146 aa9.46□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Lrrc20Q8CI70 184 aa9.46□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 HinfpQ8K1K9 503 aa9.46□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Or51e2Q8VBV9 320 aa9.46□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Olfr583Q8VG25 319 aa9.46□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Asb16Q8VHS5 453 aa9.46□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Cd209aQ91ZX1 238 aa9.46□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Tinagl1Q99JR5 466 aa9.46□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Csnk1eQ9JMK2 416 aaKnown RBP9.46□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 TfecQ9WTW4 317 aa9.46□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 ClcnkaQ9WUB7 687 aa9.46□□□□□ -0.89
Ccdc40-201ENSMUST00000035935 Glb1l3A2RSQ1 649 aa9.46□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Vmn2r60L7N2A1 853 aa9.46□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 EomesO54839 707 aa9.46□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Il7rP16872 459 aa9.46□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Hoxd12P23812 268 aa9.46□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Olfr429Q7TRW1 312 aa9.46□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Olfr314Q7TRZ7 330 aa9.46□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Mblac1Q8BWY4 260 aa9.46□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Slc35f4Q8BZK4 485 aa9.46□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Defb35Q8R2I3 63 aa9.46□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 DhrsxQ8VBZ0 335 aa9.46□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Olfr54Q8VFE6 313 aa9.46□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Pink1Q99MQ3 580 aa9.46□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Actl6bQ99MR0 426 aa9.46□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Wdr5bQ9D7H2 328 aa9.46□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Neu3Q9JMH7 418 aa9.46□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Pmm2Q9Z2M7 242 aa9.46□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Myh14Q6URW6 2000 aa9.46□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Pgbd5D3YZI9 523 aa9.46□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Zfp820E9Q5G8 549 aa9.46□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Igkv7-33P01632 114 aa9.46□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Pou2f1P25425 770 aa9.46□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Atp5j2P56135 88 aaKnown RBP9.46□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Tnfaip3Q60769 775 aa9.46□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Gas6Q61592 674 aa9.46□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Slc17a1Q61983 465 aa9.46□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 4930553M12RikQ9CUH1 165 aa9.46□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Slc34a2Q9DBP0 697 aa9.46□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Mfap5Q9QZJ6 164 aa9.46□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Aloxe3Q9WV07 711 aa9.46□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Phf1Q9Z1B8 559 aa9.46□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Ubl3Q9Z2M6 117 aa9.46□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Dmrta2A2A9A2 531 aa9.45□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Vmn1r177E9PXM3 309 aa9.45□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Raet1cO08604 253 aa9.45□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Il5raP21183 415 aa9.45□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 CapzbP47757 277 aaKnown RBP9.45□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 GifP52787 417 aa9.45□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Ppp2cbP62715 309 aa9.45□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Ppp2caP63330 309 aa9.45□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 ZpbpQ62522 350 aa9.45□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Tmeff1Q6PFE7 372 aa9.45□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Eif5a2Q8BGY2 153 aaKnown RBP9.45□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Nob1Q8BW10 403 aa9.45□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Dzank1Q8C008 778 aa9.45□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 FntbQ8K2I1 437 aa9.45□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Olfr646Q8VGW2 312 aa9.45□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 EsamQ925F2 394 aa9.45□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Ifitm3Q9CQW9 137 aa9.45□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Arfgap3Q9D8S3 523 aa9.45□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Ing5Q9D8Y8 240 aa9.45□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Olfr225E9PWF9 419 aa9.45□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Vmn2r30K7N5W1 852 aa9.45□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Vmn2r47K7N709 852 aa9.45□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 NfyaP23708 346 aa9.45□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Elk1P41969 429 aa9.45□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Casp3P70677 277 aa9.45□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Pgap2Q3TQR0 254 aa9.45□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Epha5Q60629 876 aa9.45□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Grb2Q60631 217 aaKnown RBP9.45□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Stoml3Q6PE84 287 aa9.45□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Fam57bQ7TNV1 275 aa9.45□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Vrk1Q80X41 440 aa9.45□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Vash1Q8C1W1 375 aa9.45□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 4930451G09RikQ8C5G4 195 aa9.45□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Slc1a7Q8JZR4 559 aa9.45□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Srpx2Q8R054 468 aa9.45□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Olfr1217Q8VGG1 304 aa9.45□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Adarb1Q91ZS8 711 aaKnown RBP9.45□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Dnajc4Q9D844 244 aa9.45□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Slc25a43A2A3V2 341 aa9.45□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Esp15A8R0U8 85 aa9.45□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 OpcmlG5E8G3 345 aa9.45□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Ms4a18J3QN01 344 aa9.45□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Eef1a1P10126 462 aaKnown RBP9.45□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 HbegfQ06186 208 aa9.45□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Prss43Q76HL1 382 aa9.45□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Kiaa1456Q80WQ4 447 aa9.45□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Emc1Q8C7X2 997 aaKnown RBP9.45□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Rdh10Q8VCH7 341 aa9.45□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Itgbl1Q8VDV0 494 aa9.45□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Armc10Q9D0L7 306 aa9.45□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Izumo1rQ9EQF4 244 aa9.45□□□□□ -0.9
Retrieved 100 of 22,080 RNA–protein pairs in 36.1 ms