RNA–Protein interactions for RNA: ENSMUST00000005600.5

Rfx1-201, Transcript of MHC class II regulatory factor RFX1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Rfx1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1-201ENSMUST00000005600 Usp18Q9WTV6 368 aa10.97□□□□□ -0.65
Rfx1-201ENSMUST00000005600 Eif3gQ9Z1D1 320 aaKnown RBP10.97□□□□□ -0.65
Rfx1-201ENSMUST00000005600 Kcnj16Q9Z307 419 aa10.97□□□□□ -0.65
Rfx1-201ENSMUST00000005600 Olfr1156A2AVC3 323 aa10.97□□□□□ -0.65
Rfx1-201ENSMUST00000005600 Gpr155A2AWR3 868 aa10.97□□□□□ -0.65
Rfx1-201ENSMUST00000005600 Gm16434J3QN10 205 aa10.97□□□□□ -0.65
Rfx1-201ENSMUST00000005600 Gstm2P15626 218 aa10.97□□□□□ -0.65
Rfx1-201ENSMUST00000005600 Klk1b9P15949 261 aa10.97□□□□□ -0.65
Rfx1-201ENSMUST00000005600 Kcnc3Q63959 769 aa10.97□□□□□ -0.65
Rfx1-201ENSMUST00000005600 Ube3dQ8BX13 368 aa10.97□□□□□ -0.65
Rfx1-201ENSMUST00000005600 PigmQ8C2R7 423 aa10.97□□□□□ -0.65
Rfx1-201ENSMUST00000005600 Agbl3Q8CDP0 1006 aa10.97□□□□□ -0.65
Rfx1-201ENSMUST00000005600 Fbxo4Q8CHQ0 385 aa10.97□□□□□ -0.65
Rfx1-201ENSMUST00000005600 Olfr229Q8VFN5 307 aa10.97□□□□□ -0.65
Rfx1-201ENSMUST00000005600 Mrps24Q9CQV5 167 aa10.97□□□□□ -0.65
Rfx1-201ENSMUST00000005600 Ptp4a3Q9D658 173 aa10.97□□□□□ -0.65
Rfx1-201ENSMUST00000005600 Pycr3Q9DCC4 274 aa10.97□□□□□ -0.65
Rfx1-201ENSMUST00000005600 PrnA0A075B668 197 aa10.97□□□□□ -0.65
Rfx1-201ENSMUST00000005600 Gm3952A0A0A6YXJ1 191 aa10.97□□□□□ -0.65
Rfx1-201ENSMUST00000005600 Dpy19l1A6X919 746 aa10.97□□□□□ -0.65
Rfx1-201ENSMUST00000005600 Vmn1r137D3YTY1 307 aa10.97□□□□□ -0.65
Rfx1-201ENSMUST00000005600 Vmn1r143E9PUW9 307 aa10.97□□□□□ -0.65
Rfx1-201ENSMUST00000005600 Vmn1r157E9Q069 297 aa10.97□□□□□ -0.65
Rfx1-201ENSMUST00000005600 Vmn1r139E9Q8L6 297 aa10.97□□□□□ -0.65
Rfx1-201ENSMUST00000005600 Vmn1r112G3UY48 297 aa10.97□□□□□ -0.65
Rfx1-201ENSMUST00000005600 Vmn1r135K9J7G0 307 aa10.97□□□□□ -0.65
Rfx1-201ENSMUST00000005600 Vmn1r125L7N227 307 aa10.97□□□□□ -0.65
Rfx1-201ENSMUST00000005600 Vmn1r116L7N2A6 307 aa10.97□□□□□ -0.65
Rfx1-201ENSMUST00000005600 Gm3033M0QWI0 180 aa10.97□□□□□ -0.65
Rfx1-201ENSMUST00000005600 Gm3532M0QWL4 194 aa10.97□□□□□ -0.65
Rfx1-201ENSMUST00000005600 Sp100O35892 482 aa10.97□□□□□ -0.65
Rfx1-201ENSMUST00000005600 H2-Q10P01898 325 aa10.97□□□□□ -0.65
Rfx1-201ENSMUST00000005600 Tyrp1P07147 537 aa10.97□□□□□ -0.65
Rfx1-201ENSMUST00000005600 Igsf6P0C6B7 237 aa10.97□□□□□ -0.65
Rfx1-201ENSMUST00000005600 Pcsk4P29121 655 aa10.97□□□□□ -0.65
Rfx1-201ENSMUST00000005600 Fgf13P70377 245 aa10.97□□□□□ -0.65
Rfx1-201ENSMUST00000005600 Q149G0 166 aaKnown RBP10.97□□□□□ -0.65
Rfx1-201ENSMUST00000005600 Tfap2eQ6VUP9 442 aa10.97□□□□□ -0.65
Rfx1-201ENSMUST00000005600 Fbxl2Q8BH16 423 aa10.97□□□□□ -0.65
Rfx1-201ENSMUST00000005600 Nob1Q8BW10 403 aa10.97□□□□□ -0.65
Rfx1-201ENSMUST00000005600 Kremen2Q8K1S7 461 aa10.97□□□□□ -0.65
Rfx1-201ENSMUST00000005600 DutQ8VCG1 200 aaKnown RBP10.97□□□□□ -0.65
Rfx1-201ENSMUST00000005600 Abhd14bQ8VCR7 210 aa10.97□□□□□ -0.65
Rfx1-201ENSMUST00000005600 Olfr828Q8VFM8 312 aa10.97□□□□□ -0.65
Rfx1-201ENSMUST00000005600 Cdca4Q9CWM2 237 aa10.97□□□□□ -0.65
Rfx1-201ENSMUST00000005600 Tomm34Q9CYG7 309 aa10.97□□□□□ -0.65
Rfx1-201ENSMUST00000005600 Slc25a27Q9D6D0 322 aa10.97□□□□□ -0.65
Rfx1-201ENSMUST00000005600 Lrrc51Q9DAK8 192 aa10.97□□□□□ -0.65
Rfx1-201ENSMUST00000005600 Vmn1r100Q9EPS5 307 aa10.97□□□□□ -0.65
Rfx1-201ENSMUST00000005600 Cldn12Q9ET43 244 aa10.97□□□□□ -0.65
Rfx1-201ENSMUST00000005600 PrndQ9QUG3 179 aa10.97□□□□□ -0.65
Rfx1-201ENSMUST00000005600 Gk2Q9WU65 554 aa10.97□□□□□ -0.65
Rfx1-201ENSMUST00000005600 Psmd4O35226 376 aaKnown RBP10.96□□□□□ -0.65
Rfx1-201ENSMUST00000005600 Rab11bP46638 218 aa10.96□□□□□ -0.65
Rfx1-201ENSMUST00000005600 GifP52787 417 aa10.96□□□□□ -0.65
Rfx1-201ENSMUST00000005600 CdaP56389 146 aa10.96□□□□□ -0.65
Rfx1-201ENSMUST00000005600 Tmem231Q3U284 315 aa10.96□□□□□ -0.65
Rfx1-201ENSMUST00000005600 Olfr1106Q7TR57 312 aa10.96□□□□□ -0.65
Rfx1-201ENSMUST00000005600 Olfr1058Q7TR74 316 aa10.96□□□□□ -0.65
Rfx1-201ENSMUST00000005600 4933402N03RikQ8CDT9 329 aa10.96□□□□□ -0.65
Rfx1-201ENSMUST00000005600 Hist1h2akQ8CGP7 130 aa10.96□□□□□ -0.65
Rfx1-201ENSMUST00000005600 Olfr1217Q8VGG1 304 aa10.96□□□□□ -0.65
Rfx1-201ENSMUST00000005600 Pycr1Q922W5 309 aa10.96□□□□□ -0.65
Rfx1-201ENSMUST00000005600 Dusp22Q99N11 184 aa10.96□□□□□ -0.65
Rfx1-201ENSMUST00000005600 LipfQ9CPP7 395 aa10.96□□□□□ -0.65
Rfx1-201ENSMUST00000005600 Asb12Q9D738 308 aa10.96□□□□□ -0.65
Rfx1-201ENSMUST00000005600 Taf8Q9EQH4 308 aa10.96□□□□□ -0.65
Rfx1-201ENSMUST00000005600 Suv39h2Q9EQQ0 477 aa10.96□□□□□ -0.65
Rfx1-201ENSMUST00000005600 Gm21936A0A1Y7VJE9 144 aa10.96□□□□□ -0.65
Rfx1-201ENSMUST00000005600 Atxn7l3A2AWT3 347 aa10.96□□□□□ -0.65
Rfx1-201ENSMUST00000005600 Btbd8D3YUB6 377 aa10.96□□□□□ -0.65
Rfx1-201ENSMUST00000005600 Zfp599E9PWP1 548 aa10.96□□□□□ -0.65
Rfx1-201ENSMUST00000005600 Omt2aF6ZJR3 104 aa10.96□□□□□ -0.65
Rfx1-201ENSMUST00000005600 Gm2056J3QQ02 144 aa10.96□□□□□ -0.65
Rfx1-201ENSMUST00000005600 Tspan6O70401 245 aa10.96□□□□□ -0.65
Rfx1-201ENSMUST00000005600 HexaP29416 528 aa10.96□□□□□ -0.65
Rfx1-201ENSMUST00000005600 Ptx3P48759 381 aa10.96□□□□□ -0.65
Rfx1-201ENSMUST00000005600 Milr1Q3TB92 246 aa10.96□□□□□ -0.65
Rfx1-201ENSMUST00000005600 Rps27Q6ZWU9 84 aaKnown RBP10.96□□□□□ -0.65
Rfx1-201ENSMUST00000005600 Doc2aQ7TNF0 405 aa10.96□□□□□ -0.65
Rfx1-201ENSMUST00000005600 Olfr1065Q7TR70 313 aa10.96□□□□□ -0.65
Rfx1-201ENSMUST00000005600 Znf436Q8BPP0 452 aa10.96□□□□□ -0.65
Rfx1-201ENSMUST00000005600 Pi15Q8BS03 258 aa10.96□□□□□ -0.65
Rfx1-201ENSMUST00000005600 Sdhaf2Q8C6I2 164 aa10.96□□□□□ -0.65
Rfx1-201ENSMUST00000005600 Agpat2Q8K3K7 278 aa10.96□□□□□ -0.65
Rfx1-201ENSMUST00000005600 Clec2fQ8VI21 196 aa10.96□□□□□ -0.65
Rfx1-201ENSMUST00000005600 NosipQ9D6T0 301 aaKnown RBP10.96□□□□□ -0.65
Rfx1-201ENSMUST00000005600 Qtrt1Q9JMA2 403 aa10.96□□□□□ -0.65
Rfx1-201ENSMUST00000005600 Cml5Q9QXS8 227 aa10.96□□□□□ -0.65
Rfx1-201ENSMUST00000005600 Dennd4cA6H8H2 1906 aa10.96□□□□□ -0.66
Rfx1-201ENSMUST00000005600 Olfr1082A0A1L1SUC9 313 aa10.96□□□□□ -0.66
Rfx1-201ENSMUST00000005600 Gm42517A0A1Y7VLQ2 374 aa10.96□□□□□ -0.66
Rfx1-201ENSMUST00000005600 Zfp712E9PXJ4 705 aa10.96□□□□□ -0.66
Rfx1-201ENSMUST00000005600 Olfr547E9PXN3 311 aa10.96□□□□□ -0.66
Rfx1-201ENSMUST00000005600 Pbx2O35984 430 aa10.96□□□□□ -0.66
Rfx1-201ENSMUST00000005600 Foxa1P35582 468 aa10.96□□□□□ -0.66
Rfx1-201ENSMUST00000005600 Ufd1P70362 307 aa10.96□□□□□ -0.66
Rfx1-201ENSMUST00000005600 Inca1Q6PKN7 231 aa10.96□□□□□ -0.66
Rfx1-201ENSMUST00000005600 Olfr1115Q7TR53 326 aa10.96□□□□□ -0.66
Rfx1-201ENSMUST00000005600 Slc22a20Q80UJ1 556 aa10.96□□□□□ -0.66
Retrieved 100 of 22,080 RNA–protein pairs in 25 ms