RNA–Protein interactions for RNA: ENST00000641009.1

LINC00339-211, long intergenic non-protein coding RNA 339, humanhuman

Gene LINC00339, Length 1,450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-211ENST00000641009 PCMT1P22061 227 aa11.84□□□□□ -0.51
LINC00339-211ENST00000641009 GCH1P30793 250 aa11.84□□□□□ -0.51
LINC00339-211ENST00000641009 GUCA1AP43080 201 aaPredicted RBP11.84□□□□□ -0.51
LINC00339-211ENST00000641009 NUDT2P50583 147 aa11.84□□□□□ -0.51
LINC00339-211ENST00000641009 MMP15P51511 669 aa11.84□□□□□ -0.51
LINC00339-211ENST00000641009 RAP1BP61224 184 aa11.84□□□□□ -0.51
LINC00339-211ENST00000641009 RAP1AP62834 184 aa11.84□□□□□ -0.51
LINC00339-211ENST00000641009 ENDOGQ14249 297 aaKnown RBP11.84□□□□□ -0.51
LINC00339-211ENST00000641009 MOGQ16653 247 aa11.84□□□□□ -0.51
LINC00339-211ENST00000641009 LIPNQ5VXI9 398 aa11.84□□□□□ -0.51
LINC00339-211ENST00000641009 MBOAT2Q6ZWT7 520 aa11.84□□□□□ -0.51
LINC00339-211ENST00000641009 ALDH16A1Q8IZ83 802 aa11.84□□□□□ -0.51
LINC00339-211ENST00000641009 RNF113BQ8IZP6 322 aaKnown RBP11.84□□□□□ -0.51
LINC00339-211ENST00000641009 OR51F2Q8NH61 342 aa11.84□□□□□ -0.51
LINC00339-211ENST00000641009 ABHD4Q8TB40 342 aa11.84□□□□□ -0.51
LINC00339-211ENST00000641009 KLF14Q8TD94 323 aaPredicted RBP11.84□□□□□ -0.51
LINC00339-211ENST00000641009 HOPXQ9BPY8 73 aaPredicted RBP11.84□□□□□ -0.51
LINC00339-211ENST00000641009 TIMM10BQ9Y5J6 103 aa11.84□□□□□ -0.51
LINC00339-211ENST00000641009 NGFP01138 241 aa11.83□□□□□ -0.52
LINC00339-211ENST00000641009 ITGA2P17301 1181 aa11.83□□□□□ -0.52
LINC00339-211ENST00000641009 MSR1P21757 451 aa11.83□□□□□ -0.52
LINC00339-211ENST00000641009 RPL4P36578 427 aaKnown RBP11.83□□□□□ -0.52
LINC00339-211ENST00000641009 MDH1P40925 334 aaKnown RBP11.83□□□□□ -0.52
LINC00339-211ENST00000641009 SLC9A3P48764 834 aa11.83□□□□□ -0.52
LINC00339-211ENST00000641009 PPP1CBP62140 327 aa11.83□□□□□ -0.52
LINC00339-211ENST00000641009 TEKQ02763 1124 aa11.83□□□□□ -0.52
LINC00339-211ENST00000641009 ANKDD1AQ495B1 522 aa11.83□□□□□ -0.52
LINC00339-211ENST00000641009 MBNL2Q5VZF2 373 aaKnown RBP11.83□□□□□ -0.52
LINC00339-211ENST00000641009 TMPRSS11FQ6ZWK6 438 aa11.83□□□□□ -0.52
LINC00339-211ENST00000641009 TSEN54Q7Z6J9 526 aaKnown RBP11.83□□□□□ -0.52
LINC00339-211ENST00000641009 FAM162AQ96A26 154 aa11.83□□□□□ -0.52
LINC00339-211ENST00000641009 Q96M85 177 aa11.83□□□□□ -0.52
LINC00339-211ENST00000641009 METTL17Q9H7H0 456 aaPredicted RBP11.83□□□□□ -0.52
LINC00339-211ENST00000641009 ZNF665Q9H7R5 613 aa11.83□□□□□ -0.52
LINC00339-211ENST00000641009 EFCAB1Q9HAE3 211 aa11.83□□□□□ -0.52
LINC00339-211ENST00000641009 EMC7Q9NPA0 242 aa11.83□□□□□ -0.52
LINC00339-211ENST00000641009 POLE4Q9NR33 117 aa11.83□□□□□ -0.52
LINC00339-211ENST00000641009 GRHPRQ9UBQ7 328 aa11.83□□□□□ -0.52
LINC00339-211ENST00000641009 GRIP1Q9Y3R0 1128 aa11.83□□□□□ -0.52
LINC00339-211ENST00000641009 PLSCR5A0PG75 271 aa11.83□□□□□ -0.52
LINC00339-211ENST00000641009 ZSCAN5BA6NJL1 495 aa11.83□□□□□ -0.52
LINC00339-211ENST00000641009 CLDN25C9JDP6 229 aa11.83□□□□□ -0.52
LINC00339-211ENST00000641009 CCDC22O60826 627 aa11.83□□□□□ -0.52
LINC00339-211ENST00000641009 PCBD1P61457 104 aa11.83□□□□□ -0.52
LINC00339-211ENST00000641009 HNRNPA0Q13151 305 aaKnown RBP11.83□□□□□ -0.52
LINC00339-211ENST00000641009 HFEQ30201 348 aa11.83□□□□□ -0.52
LINC00339-211ENST00000641009 ZBED5Q49AG3 693 aa11.83□□□□□ -0.52
LINC00339-211ENST00000641009 HSP90B2PQ58FF3 399 aa11.83□□□□□ -0.52
LINC00339-211ENST00000641009 MESTQ5EB52 335 aa11.83□□□□□ -0.52
LINC00339-211ENST00000641009 FAM209AQ5JX71 171 aa11.83□□□□□ -0.52
LINC00339-211ENST00000641009 UNQ6126/PRO20091Q6UXV3 157 aa11.83□□□□□ -0.52
LINC00339-211ENST00000641009 RRM2BQ7LG56 351 aa11.83□□□□□ -0.52
LINC00339-211ENST00000641009 SLC7A13Q8TCU3 470 aa11.83□□□□□ -0.52
LINC00339-211ENST00000641009 FAM46AQ96IP4 442 aaKnown RBP11.83□□□□□ -0.52
LINC00339-211ENST00000641009 KCTD14Q9BQ13 255 aaPredicted RBP11.83□□□□□ -0.52
LINC00339-211ENST00000641009 OCEL1Q9H607 264 aa11.83□□□□□ -0.52
LINC00339-211ENST00000641009 NMNAT1Q9HAN9 279 aaPredicted RBP11.83□□□□□ -0.52
LINC00339-211ENST00000641009 METRNQ9UJH8 293 aa11.83□□□□□ -0.52
LINC00339-211ENST00000641009 WIPI2Q9Y4P8 454 aa11.83□□□□□ -0.52
LINC00339-211ENST00000641009 DOCK11Q5JSL3 2073 aa11.82□□□□□ -0.52
LINC00339-211ENST00000641009 C12orf71A8MTZ7 269 aa11.82□□□□□ -0.52
LINC00339-211ENST00000641009 ICMTO60725 284 aa11.82□□□□□ -0.52
LINC00339-211ENST00000641009 CD14P08571 375 aa11.82□□□□□ -0.52
LINC00339-211ENST00000641009 SPRNQ5BIV9 151 aa11.82□□□□□ -0.52
LINC00339-211ENST00000641009 OTPQ5XKR4 325 aa11.82□□□□□ -0.52
LINC00339-211ENST00000641009 ACSM5Q6NUN0 579 aa11.82□□□□□ -0.52
LINC00339-211ENST00000641009 FAHD2BQ6P2I3 314 aaPredicted RBP11.82□□□□□ -0.52
LINC00339-211ENST00000641009 HACD2Q6Y1H2 254 aa11.82□□□□□ -0.52
LINC00339-211ENST00000641009 THSD4Q6ZMP0 1018 aa11.82□□□□□ -0.52
LINC00339-211ENST00000641009 ZNF771Q7L3S4 317 aaPredicted RBP11.82□□□□□ -0.52
LINC00339-211ENST00000641009 FAM122BQ7Z309 247 aa11.82□□□□□ -0.52
LINC00339-211ENST00000641009 CYP4Z1Q86W10 505 aa11.82□□□□□ -0.52
LINC00339-211ENST00000641009 FAM156AQ8NDB6 213 aa11.82□□□□□ -0.52
LINC00339-211ENST00000641009 CCL17Q92583 94 aa11.82□□□□□ -0.52
LINC00339-211ENST00000641009 RASD2Q96D21 266 aa11.82□□□□□ -0.52
LINC00339-211ENST00000641009 ELMOD3Q96FG2 381 aa11.82□□□□□ -0.52
LINC00339-211ENST00000641009 FAHD2AQ96GK7 314 aa11.82□□□□□ -0.52
LINC00339-211ENST00000641009 C4orf45Q96LM5 186 aa11.82□□□□□ -0.52
LINC00339-211ENST00000641009 ZNF570Q96NI8 536 aa11.82□□□□□ -0.52
LINC00339-211ENST00000641009 ELOVL3Q9HB03 270 aa11.82□□□□□ -0.52
LINC00339-211ENST00000641009 MSL2Q9HCI7 577 aa11.82□□□□□ -0.52
LINC00339-211ENST00000641009 ABCD2Q9UBJ2 740 aa11.82□□□□□ -0.52
LINC00339-211ENST00000641009 EGFL7Q9UHF1 273 aa11.82□□□□□ -0.52
LINC00339-211ENST00000641009 ENPP4Q9Y6X5 453 aa11.82□□□□□ -0.52
LINC00339-211ENST00000641009 TRAV20A0A0B4J274 112 aa11.81□□□□□ -0.52
LINC00339-211ENST00000641009 TEX13CA0A0J9YWL9 993 aa11.81□□□□□ -0.52
LINC00339-211ENST00000641009 PRSS37A4D1T9 235 aa11.81□□□□□ -0.52
LINC00339-211ENST00000641009 XKRYO14609 159 aa11.81□□□□□ -0.52
LINC00339-211ENST00000641009 IMPA2O14732 288 aa11.81□□□□□ -0.52
LINC00339-211ENST00000641009 DOK2O60496 412 aa11.81□□□□□ -0.52
LINC00339-211ENST00000641009 DEAF1O75398 565 aaPredicted RBP11.81□□□□□ -0.52
LINC00339-211ENST00000641009 UBOX5O94941 541 aa11.81□□□□□ -0.52
LINC00339-211ENST00000641009 MPZL1O95297 269 aa11.81□□□□□ -0.52
LINC00339-211ENST00000641009 ABHD16AO95870 558 aa11.81□□□□□ -0.52
LINC00339-211ENST00000641009 PNPP00491 289 aa11.81□□□□□ -0.52
LINC00339-211ENST00000641009 CTLA4P16410 223 aa11.81□□□□□ -0.52
LINC00339-211ENST00000641009 ARHGDIAP52565 204 aa11.81□□□□□ -0.52
LINC00339-211ENST00000641009 FGD3Q5JSP0 725 aa11.81□□□□□ -0.52
LINC00339-211ENST00000641009 SHQ1Q6PI26 577 aaKnown RBP11.81□□□□□ -0.52
LINC00339-211ENST00000641009 C1orf229Q6ZS94 237 aaPredicted RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms