RNA–Protein interactions for RNA: ENST00000639487.1

RTTN-215, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 3,175 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-215ENST00000639487 MVKQ03426 396 aa5.69□□□□□ -1.5
RTTN-215ENST00000639487 BTBD16Q32M84 506 aa5.69□□□□□ -1.5
RTTN-215ENST00000639487 ZBED5Q49AG3 693 aa5.69□□□□□ -1.5
RTTN-215ENST00000639487 SFRP5Q5T4F7 317 aa5.69□□□□□ -1.5
RTTN-215ENST00000639487 RNF130Q86XS8 419 aa5.69□□□□□ -1.5
RTTN-215ENST00000639487 CPEB3Q8NE35 698 aaKnown RBP5.69□□□□□ -1.5
RTTN-215ENST00000639487 CNOT9Q92600 299 aaKnown RBP5.69□□□□□ -1.5
RTTN-215ENST00000639487 MRPL48Q96GC5 212 aaKnown RBP5.69□□□□□ -1.5
RTTN-215ENST00000639487 SLC25A44Q96H78 314 aaPredicted RBP5.69□□□□□ -1.5
RTTN-215ENST00000639487 SRA1Q9HD15 236 aaKnown RBP5.69□□□□□ -1.5
RTTN-215ENST00000639487 COA4Q9NYJ1 87 aa5.69□□□□□ -1.5
RTTN-215ENST00000639487 RPH3ALQ9UNE2 315 aa5.69□□□□□ -1.5
RTTN-215ENST00000639487 CFAP20Q9Y6A4 193 aaKnown RBP5.69□□□□□ -1.5
RTTN-215ENST00000639487 ZNF99A8MXY4 864 aaPredicted RBP5.68□□□□□ -1.5
RTTN-215ENST00000639487 FAM227AF5H4B4 570 aa5.68□□□□□ -1.5
RTTN-215ENST00000639487 SURF4O15260 269 aa5.68□□□□□ -1.5
RTTN-215ENST00000639487 OGG1O15527 345 aa5.68□□□□□ -1.5
RTTN-215ENST00000639487 CD14P08571 375 aa5.68□□□□□ -1.5
RTTN-215ENST00000639487 STAG3L3P0CL85 134 aa5.68□□□□□ -1.5
RTTN-215ENST00000639487 ERP29P30040 261 aaKnown RBP5.68□□□□□ -1.5
RTTN-215ENST00000639487 COMPP49747 757 aaPredicted RBP5.68□□□□□ -1.5
RTTN-215ENST00000639487 GBX2P52951 348 aaPredicted RBP5.68□□□□□ -1.5
RTTN-215ENST00000639487 SLC25A3Q00325 362 aa5.68□□□□□ -1.5
RTTN-215ENST00000639487 APOFQ13790 326 aa5.68□□□□□ -1.5
RTTN-215ENST00000639487 RBM48Q5RL73 367 aaKnown RBP5.68□□□□□ -1.5
RTTN-215ENST00000639487 HLA-DQA1Q5Y7H0 255 aa5.68□□□□□ -1.5
RTTN-215ENST00000639487 OR4D11Q8NGI4 311 aa5.68□□□□□ -1.5
RTTN-215ENST00000639487 CHAC2Q8WUX2 184 aa5.68□□□□□ -1.5
RTTN-215ENST00000639487 NANOS1Q8WY41 292 aaKnown RBP5.68□□□□□ -1.5
RTTN-215ENST00000639487 ATP6V0BQ99437 205 aa5.68□□□□□ -1.5
RTTN-215ENST00000639487 NAA50Q9GZZ1 169 aaKnown RBP5.68□□□□□ -1.5
RTTN-215ENST00000639487 TMEM27Q9HBJ8 222 aa5.68□□□□□ -1.5
RTTN-215ENST00000639487 POLE4Q9NR33 117 aa5.68□□□□□ -1.5
RTTN-215ENST00000639487 TMEM38BQ9NVV0 291 aa5.68□□□□□ -1.5
RTTN-215ENST00000639487 DAPK2Q9UIK4 370 aa5.68□□□□□ -1.5
RTTN-215ENST00000639487 ZNF346Q9UL40 294 aaKnown RBP5.68□□□□□ -1.5
RTTN-215ENST00000639487 MCTS1Q9ULC4 181 aaKnown RBP5.68□□□□□ -1.5
RTTN-215ENST00000639487 LSM2Q9Y333 95 aaKnown RBP5.68□□□□□ -1.5
RTTN-215ENST00000639487 PMF1-BGLAPU3KQ54 211 aa5.68□□□□□ -1.5
RTTN-215ENST00000639487 XKRY2A2RUG3 117 aa5.68□□□□□ -1.5
RTTN-215ENST00000639487 ZNF726A6NNF4 738 aa5.68□□□□□ -1.5
RTTN-215ENST00000639487 NPIPB11E5RHQ5 1161 aa5.68□□□□□ -1.5
RTTN-215ENST00000639487 KPNA4O00629 521 aaPredicted RBP5.68□□□□□ -1.5
RTTN-215ENST00000639487 SGCEO43556 437 aa5.68□□□□□ -1.5
RTTN-215ENST00000639487 CCNB2O95067 398 aa5.68□□□□□ -1.5
RTTN-215ENST00000639487 LHBP01229 141 aa5.68□□□□□ -1.5
RTTN-215ENST00000639487 OPN1LWP04000 364 aa5.68□□□□□ -1.5
RTTN-215ENST00000639487 ADRA2CP18825 462 aa5.68□□□□□ -1.5
RTTN-215ENST00000639487 CCKARP32238 428 aa5.68□□□□□ -1.5
RTTN-215ENST00000639487 KIR3DL2P43630 455 aa5.68□□□□□ -1.5
RTTN-215ENST00000639487 ZNF468Q5VIY5 522 aaPredicted RBP5.68□□□□□ -1.5
RTTN-215ENST00000639487 OR2T5Q6IEZ7 315 aa5.68□□□□□ -1.5
RTTN-215ENST00000639487 SLC27A4Q6P1M0 643 aa5.68□□□□□ -1.5
RTTN-215ENST00000639487 SMARCD3Q6STE5 483 aa5.68□□□□□ -1.5
RTTN-215ENST00000639487 ETV3LQ6ZN32 361 aa5.68□□□□□ -1.5
RTTN-215ENST00000639487 GDPGP1Q6ZNW5 385 aa5.68□□□□□ -1.5
RTTN-215ENST00000639487 PTCHD4Q6ZW05 846 aa5.68□□□□□ -1.5
RTTN-215ENST00000639487 OR2T29Q8NH02 315 aa5.68□□□□□ -1.5
RTTN-215ENST00000639487 CORO2AQ92828 525 aa5.68□□□□□ -1.5
RTTN-215ENST00000639487 NEU1Q99519 415 aa5.68□□□□□ -1.5
RTTN-215ENST00000639487 RTN4RQ9BZR6 473 aa5.68□□□□□ -1.5
RTTN-215ENST00000639487 PKIBQ9C010 78 aa5.68□□□□□ -1.5
RTTN-215ENST00000639487 HDHD2Q9H0R4 259 aa5.68□□□□□ -1.5
RTTN-215ENST00000639487 AKIRIN1Q9H9L7 192 aaPredicted RBP5.68□□□□□ -1.5
RTTN-215ENST00000639487 NMNAT1Q9HAN9 279 aaPredicted RBP5.68□□□□□ -1.5
RTTN-215ENST00000639487 MEPEQ9NQ76 525 aaPredicted RBP5.68□□□□□ -1.5
RTTN-215ENST00000639487 TAS2R16Q9NYV7 291 aa5.68□□□□□ -1.5
RTTN-215ENST00000639487 MRPL15Q9P015 296 aaKnown RBP5.68□□□□□ -1.5
RTTN-215ENST00000639487 PCDHB10Q9UN67 800 aa5.68□□□□□ -1.5
RTTN-215ENST00000639487 AURKCQ9UQB9 309 aa5.68□□□□□ -1.5
RTTN-215ENST00000639487 A0A0G2JNJ9 132 aa5.67□□□□□ -1.5
RTTN-215ENST00000639487 TRBV5-5A0A0J9YX44 114 aa5.67□□□□□ -1.5
RTTN-215ENST00000639487 A0A1B0GWA3 101 aa5.67□□□□□ -1.5
RTTN-215ENST00000639487 IFNW1P05000 195 aa5.67□□□□□ -1.5
RTTN-215ENST00000639487 CD3GP09693 182 aa5.67□□□□□ -1.5
RTTN-215ENST00000639487 DANCRP0C864 163 aa5.67□□□□□ -1.5
RTTN-215ENST00000639487 OR12D1P0DN82 309 aa5.67□□□□□ -1.5
RTTN-215ENST00000639487 ZNF26P17031 533 aaPredicted RBP5.67□□□□□ -1.5
RTTN-215ENST00000639487 EPHA3P29320 983 aa5.67□□□□□ -1.5
RTTN-215ENST00000639487 HTR1FP30939 366 aa5.67□□□□□ -1.5
RTTN-215ENST00000639487 KCNJ3P48549 501 aa5.67□□□□□ -1.5
RTTN-215ENST00000639487 PPP5CP53041 499 aa5.67□□□□□ -1.5
RTTN-215ENST00000639487 LTBQ06643 244 aa5.67□□□□□ -1.5
RTTN-215ENST00000639487 FAM98BQ52LJ0 330 aaKnown RBP5.67□□□□□ -1.5
RTTN-215ENST00000639487 ESCO2Q56NI9 601 aa5.67□□□□□ -1.5
RTTN-215ENST00000639487 BEX5Q5H9J7 111 aa5.67□□□□□ -1.5
RTTN-215ENST00000639487 ZNF691Q5VV52 312 aa5.67□□□□□ -1.5
RTTN-215ENST00000639487 ANKRD26P1Q6NSI1 321 aa5.67□□□□□ -1.5
RTTN-215ENST00000639487 TTC33Q6PID6 262 aaPredicted RBP5.67□□□□□ -1.5
RTTN-215ENST00000639487 KLHL17Q6TDP4 642 aa5.67□□□□□ -1.5
RTTN-215ENST00000639487 SHFQ7M4L6 423 aa5.67□□□□□ -1.5
RTTN-215ENST00000639487 SSX9Q7RTT3 188 aa5.67□□□□□ -1.5
RTTN-215ENST00000639487 SLC16A14Q7RTX9 510 aa5.67□□□□□ -1.5
RTTN-215ENST00000639487 ARIH2OSQ8N7S6 290 aa5.67□□□□□ -1.5
RTTN-215ENST00000639487 CYB561A3Q8NBI2 242 aa5.67□□□□□ -1.5
RTTN-215ENST00000639487 TBC1D15Q8TC07 691 aa5.67□□□□□ -1.5
RTTN-215ENST00000639487 RNF133Q8WVZ7 376 aa5.67□□□□□ -1.5
RTTN-215ENST00000639487 TMEM239Q8WW34 195 aa5.67□□□□□ -1.5
RTTN-215ENST00000639487 DOK1Q99704 481 aa5.67□□□□□ -1.5
RTTN-215ENST00000639487 SSX3Q99909 188 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms