RNA–Protein interactions for RNA: ENST00000638120.1

CACNA1D-228, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 2 BASIC

Gene CACNA1D, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-228ENST00000638120 TRIM16LQ309B1 348 aa10.88□□□□□ -0.67
CACNA1D-228ENST00000638120 SLC25A35Q3KQZ1 300 aa10.88□□□□□ -0.67
CACNA1D-228ENST00000638120 CEP78Q5JTW2 689 aa10.88□□□□□ -0.67
CACNA1D-228ENST00000638120 AGAP7PQ5VUJ5 663 aa10.88□□□□□ -0.67
CACNA1D-228ENST00000638120 ABLIM2Q6H8Q1 611 aa10.88□□□□□ -0.67
CACNA1D-228ENST00000638120 ZNF544Q6NX49 715 aa10.88□□□□□ -0.67
CACNA1D-228ENST00000638120 LRFN4Q6PJG9 635 aa10.88□□□□□ -0.67
CACNA1D-228ENST00000638120 UBQLNLQ8IYU4 475 aa10.88□□□□□ -0.67
CACNA1D-228ENST00000638120 TMEM123Q8N131 208 aa10.88□□□□□ -0.67
CACNA1D-228ENST00000638120 GPR148Q8TDV2 347 aa10.88□□□□□ -0.67
CACNA1D-228ENST00000638120 COX4I2Q96KJ9 171 aa10.88□□□□□ -0.67
CACNA1D-228ENST00000638120 AGAP4Q96P64 663 aa10.88□□□□□ -0.67
CACNA1D-228ENST00000638120 TTTY12Q9BZ98 90 aa10.88□□□□□ -0.67
CACNA1D-228ENST00000638120 B3GAT2Q9NPZ5 323 aa10.88□□□□□ -0.67
CACNA1D-228ENST00000638120 GLTPQ9NZD2 209 aa10.88□□□□□ -0.67
CACNA1D-228ENST00000638120 ZNF292O60281 2723 aa10.88□□□□□ -0.67
CACNA1D-228ENST00000638120 ARPC4-TTLL3A0A0A6YYG9 625 aa10.87□□□□□ -0.67
CACNA1D-228ENST00000638120 ANKRD61A6NGH8 418 aa10.87□□□□□ -0.67
CACNA1D-228ENST00000638120 MAGEB3O15480 346 aa10.87□□□□□ -0.67
CACNA1D-228ENST00000638120 CXCL13O43927 109 aa10.87□□□□□ -0.67
CACNA1D-228ENST00000638120 NME2P1O60361 137 aa10.87□□□□□ -0.67
CACNA1D-228ENST00000638120 SP1P08047 785 aa10.87□□□□□ -0.67
CACNA1D-228ENST00000638120 SRMP19623 302 aa10.87□□□□□ -0.67
CACNA1D-228ENST00000638120 NME2P22392 152 aa10.87□□□□□ -0.67
CACNA1D-228ENST00000638120 MAGEB1P43366 347 aa10.87□□□□□ -0.67
CACNA1D-228ENST00000638120 CSNK1A1P48729 337 aa10.87□□□□□ -0.67
CACNA1D-228ENST00000638120 STARP49675 285 aa10.87□□□□□ -0.67
CACNA1D-228ENST00000638120 SUCLG1P53597 346 aaKnown RBP10.87□□□□□ -0.67
CACNA1D-228ENST00000638120 SRSF6Q13247 344 aaKnown RBP10.87□□□□□ -0.67
CACNA1D-228ENST00000638120 KCNMB1Q16558 191 aa10.87□□□□□ -0.67
CACNA1D-228ENST00000638120 C10orf128Q5T292 105 aa10.87□□□□□ -0.67
CACNA1D-228ENST00000638120 SLC25A25Q6KCM7 469 aa10.87□□□□□ -0.67
CACNA1D-228ENST00000638120 CNIH2Q6PI25 160 aa10.87□□□□□ -0.67
CACNA1D-228ENST00000638120 XKRXQ6PP77 449 aa10.87□□□□□ -0.67
CACNA1D-228ENST00000638120 CORO6Q6QEF8 472 aa10.87□□□□□ -0.67
CACNA1D-228ENST00000638120 SYT9Q86SS6 491 aa10.87□□□□□ -0.67
CACNA1D-228ENST00000638120 CATSPERDQ86XM0 798 aa10.87□□□□□ -0.67
CACNA1D-228ENST00000638120 ZIC4Q8N9L1 334 aa10.87□□□□□ -0.67
CACNA1D-228ENST00000638120 IL17RDQ8NFM7 739 aa10.87□□□□□ -0.67
CACNA1D-228ENST00000638120 OR10AC1Q8NH08 325 aa10.87□□□□□ -0.67
CACNA1D-228ENST00000638120 OR10D3Q8NH80 312 aa10.87□□□□□ -0.67
CACNA1D-228ENST00000638120 THRSPQ92748 146 aa10.87□□□□□ -0.67
CACNA1D-228ENST00000638120 TMEM54Q969K7 222 aa10.87□□□□□ -0.67
CACNA1D-228ENST00000638120 SMAD5Q99717 465 aaKnown RBP10.87□□□□□ -0.67
CACNA1D-228ENST00000638120 SOSTQ9BQB4 213 aa10.87□□□□□ -0.67
CACNA1D-228ENST00000638120 SEC61A2Q9H9S3 476 aa10.87□□□□□ -0.67
CACNA1D-228ENST00000638120 FAIMQ9NVQ4 179 aa10.87□□□□□ -0.67
CACNA1D-228ENST00000638120 FBXL3Q9UKT7 428 aa10.87□□□□□ -0.67
CACNA1D-228ENST00000638120 SLC22A13Q9Y226 551 aa10.87□□□□□ -0.67
CACNA1D-228ENST00000638120 R4GMQ9 66 aa10.87□□□□□ -0.67
CACNA1D-228ENST00000638120 TRBV5-7A0A0A0MS05 114 aa10.86□□□□□ -0.67
CACNA1D-228ENST00000638120 A6NL46 340 aa10.86□□□□□ -0.67
CACNA1D-228ENST00000638120 PDCD5O14737 125 aa10.86□□□□□ -0.67
CACNA1D-228ENST00000638120 GLSO94925 669 aaPredicted RBP10.86□□□□□ -0.67
CACNA1D-228ENST00000638120 RAF1P04049 648 aa10.86□□□□□ -0.67
CACNA1D-228ENST00000638120 PRKAR1AP10644 381 aa10.86□□□□□ -0.67
CACNA1D-228ENST00000638120 SLC2A2P11168 524 aaPredicted RBP10.86□□□□□ -0.67
CACNA1D-228ENST00000638120 EPXP11678 715 aa10.86□□□□□ -0.67
CACNA1D-228ENST00000638120 ATF1P18846 271 aa10.86□□□□□ -0.67
CACNA1D-228ENST00000638120 AZGP1P25311 298 aaKnown RBP10.86□□□□□ -0.67
CACNA1D-228ENST00000638120 PTBP1P26599 531 aaKnown RBP eCLIP10.86□□□□□ -0.67
CACNA1D-228ENST00000638120 APEX1P27695 318 aaKnown RBP10.86□□□□□ -0.67
CACNA1D-228ENST00000638120 CDAP32320 146 aa10.86□□□□□ -0.67
CACNA1D-228ENST00000638120 RFC3P40938 356 aa10.86□□□□□ -0.67
CACNA1D-228ENST00000638120 EIF1AXP47813 144 aaKnown RBP10.86□□□□□ -0.67
CACNA1D-228ENST00000638120 SOX2P48431 317 aa10.86□□□□□ -0.67
CACNA1D-228ENST00000638120 EVX1P49640 407 aa10.86□□□□□ -0.67
CACNA1D-228ENST00000638120 CLDN15P56746 228 aa10.86□□□□□ -0.67
CACNA1D-228ENST00000638120 METAP1DQ6UB28 335 aaPredicted RBP10.86□□□□□ -0.67
CACNA1D-228ENST00000638120 GALNTL5Q7Z4T8 443 aa10.86□□□□□ -0.67
CACNA1D-228ENST00000638120 OR6N1Q8NGY5 312 aa10.86□□□□□ -0.67
CACNA1D-228ENST00000638120 PNPLA2Q96AD5 504 aa10.86□□□□□ -0.67
CACNA1D-228ENST00000638120 ORAI1Q96D31 301 aa10.86□□□□□ -0.67
CACNA1D-228ENST00000638120 SLAMF6Q96DU3 332 aa10.86□□□□□ -0.67
CACNA1D-228ENST00000638120 SLC25A18Q9H1K4 315 aa10.86□□□□□ -0.67
CACNA1D-228ENST00000638120 C1orf198Q9H425 327 aa10.86□□□□□ -0.67
CACNA1D-228ENST00000638120 EMC7Q9NPA0 242 aa10.86□□□□□ -0.67
CACNA1D-228ENST00000638120 POLE4Q9NR33 117 aa10.86□□□□□ -0.67
CACNA1D-228ENST00000638120 C14orf119Q9NWQ9 140 aa10.86□□□□□ -0.67
CACNA1D-228ENST00000638120 FOXD3Q9UJU5 478 aaPredicted RBP10.86□□□□□ -0.67
CACNA1D-228ENST00000638120 GDF2Q9UK05 429 aaPredicted RBP10.86□□□□□ -0.67
CACNA1D-228ENST00000638120 AK6Q9Y3D8 172 aaKnown RBP10.86□□□□□ -0.67
CACNA1D-228ENST00000638120 LHFPL6Q9Y693 200 aa10.86□□□□□ -0.67
CACNA1D-228ENST00000638120 CACNA1CQ13936 2221 aa10.86□□□□□ -0.67
CACNA1D-228ENST00000638120 CNTRLQ7Z7A1 2325 aa10.86□□□□□ -0.67
CACNA1D-228ENST00000638120 ZNF716A6NP11 495 aa10.86□□□□□ -0.67
CACNA1D-228ENST00000638120 FAM166BA8MTA8 275 aa10.86□□□□□ -0.67
CACNA1D-228ENST00000638120 PROB1E7EW31 1015 aa10.86□□□□□ -0.67
CACNA1D-228ENST00000638120 NKX2-8O15522 239 aa10.86□□□□□ -0.67
CACNA1D-228ENST00000638120 CELA3AP09093 270 aa10.86□□□□□ -0.67
CACNA1D-228ENST00000638120 H2BFMP0C1H6 154 aa10.86□□□□□ -0.67
CACNA1D-228ENST00000638120 CD46P15529 392 aa10.86□□□□□ -0.67
CACNA1D-228ENST00000638120 MAGEA5P43359 124 aa10.86□□□□□ -0.67
CACNA1D-228ENST00000638120 MEOX1P50221 254 aa10.86□□□□□ -0.67
CACNA1D-228ENST00000638120 ODF4Q2M2E3 257 aa10.86□□□□□ -0.67
CACNA1D-228ENST00000638120 HYAL4Q2M3T9 481 aa10.86□□□□□ -0.67
CACNA1D-228ENST00000638120 PHYHD1Q5SRE7 291 aa10.86□□□□□ -0.67
CACNA1D-228ENST00000638120 PDSS1Q5T2R2 415 aa10.86□□□□□ -0.67
CACNA1D-228ENST00000638120 FOXL2NBQ6ZUU3 175 aa10.86□□□□□ -0.67
CACNA1D-228ENST00000638120 SLC22A16Q86VW1 577 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms