RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 TMEM43Q9BTV4 400 aa6.78□□□□□ -1.32
PNKP-229ENST00000637897 TAPBPLQ9BX59 468 aa6.78□□□□□ -1.32
PNKP-229ENST00000637897 PRRG3Q9BZD7 231 aa6.78□□□□□ -1.32
PNKP-229ENST00000637897 CCDC90BQ9GZT6 254 aa6.78□□□□□ -1.32
PNKP-229ENST00000637897 CRLF2Q9HC73 371 aa6.78□□□□□ -1.32
PNKP-229ENST00000637897 CA10Q9NS85 328 aa6.78□□□□□ -1.32
PNKP-229ENST00000637897 PAK1IP1Q9NWT1 392 aaPredicted RBP6.78□□□□□ -1.32
PNKP-229ENST00000637897 MRPL39Q9NYK5 338 aaKnown RBP6.78□□□□□ -1.32
PNKP-229ENST00000637897 TESQ9UGI8 421 aaKnown RBP6.78□□□□□ -1.32
PNKP-229ENST00000637897 PSORS1C1Q9UIG5 152 aa6.78□□□□□ -1.32
PNKP-229ENST00000637897 A0A087WUU8 490 aa6.77□□□□□ -1.33
PNKP-229ENST00000637897 IGKV1D-43A0A0B4J1Z2 117 aa6.77□□□□□ -1.33
PNKP-229ENST00000637897 IGHV4-61A0A0C4DH41 118 aa6.77□□□□□ -1.33
PNKP-229ENST00000637897 TRAPPC13A5PLN9 417 aa6.77□□□□□ -1.33
PNKP-229ENST00000637897 EFCAB10A6NFE3 127 aa6.77□□□□□ -1.33
PNKP-229ENST00000637897 CPSF4LA6NMK7 179 aaKnown RBP6.77□□□□□ -1.33
PNKP-229ENST00000637897 ZNF99A8MXY4 864 aaPredicted RBP6.77□□□□□ -1.33
PNKP-229ENST00000637897 H3BN98 237 aa6.77□□□□□ -1.33
PNKP-229ENST00000637897 M0R3G1 203 aa6.77□□□□□ -1.33
PNKP-229ENST00000637897 TRMUO75648 421 aaKnown RBP6.77□□□□□ -1.33
PNKP-229ENST00000637897 F12P00748 615 aaPredicted RBP6.77□□□□□ -1.33
PNKP-229ENST00000637897 HLA-HP01893 362 aa6.77□□□□□ -1.33
PNKP-229ENST00000637897 TSPAN19P0C672 248 aa6.77□□□□□ -1.33
PNKP-229ENST00000637897 ASAH2BP0C7U1 165 aa6.77□□□□□ -1.33
PNKP-229ENST00000637897 PATE4P0C8F1 98 aa6.77□□□□□ -1.33
PNKP-229ENST00000637897 IGHV4-31P0DP07 118 aa6.77□□□□□ -1.33
PNKP-229ENST00000637897 ZNF35P13682 527 aa6.77□□□□□ -1.33
PNKP-229ENST00000637897 CBR1P16152 277 aa6.77□□□□□ -1.33
PNKP-229ENST00000637897 ZNF14P17017 642 aaPredicted RBP6.77□□□□□ -1.33
PNKP-229ENST00000637897 ZNF43P17038 809 aa6.77□□□□□ -1.33
PNKP-229ENST00000637897 GABRB1P18505 474 aa6.77□□□□□ -1.33
PNKP-229ENST00000637897 PCMT1P22061 227 aa6.77□□□□□ -1.33
PNKP-229ENST00000637897 POU1F1P28069 291 aa6.77□□□□□ -1.33
PNKP-229ENST00000637897 THBS4P35443 961 aa6.77□□□□□ -1.33
PNKP-229ENST00000637897 GSSP48637 474 aa6.77□□□□□ -1.33
PNKP-229ENST00000637897 EMX1Q04741 257 aaPredicted RBP6.77□□□□□ -1.33
PNKP-229ENST00000637897 LOXL1Q08397 574 aaPredicted RBP6.77□□□□□ -1.33
PNKP-229ENST00000637897 TSPAN31Q12999 210 aa6.77□□□□□ -1.33
PNKP-229ENST00000637897 LSAMPQ13449 338 aa6.77□□□□□ -1.33
PNKP-229ENST00000637897 CAMK2DQ13557 499 aa6.77□□□□□ -1.33
PNKP-229ENST00000637897 FHL1Q13642 323 aa6.77□□□□□ -1.33
PNKP-229ENST00000637897 EFNB3Q15768 340 aa6.77□□□□□ -1.33
PNKP-229ENST00000637897 ZNF74Q16587 644 aa6.77□□□□□ -1.33
PNKP-229ENST00000637897 TMEM249Q2WGJ8 235 aa6.77□□□□□ -1.33
PNKP-229ENST00000637897 C3orf36Q3SXR2 165 aa6.77□□□□□ -1.33
PNKP-229ENST00000637897 TMEM255AQ5JRV8 349 aa6.77□□□□□ -1.33
PNKP-229ENST00000637897 GPR107Q5VW38 600 aa6.77□□□□□ -1.33
PNKP-229ENST00000637897 CARD17Q5XLA6 110 aa6.77□□□□□ -1.33
PNKP-229ENST00000637897 C12orf73Q69YU5 71 aa6.77□□□□□ -1.33
PNKP-229ENST00000637897 KLHL24Q6TFL4 600 aa6.77□□□□□ -1.33
PNKP-229ENST00000637897 RASSF6Q6ZTQ3 369 aa6.77□□□□□ -1.33
PNKP-229ENST00000637897 ZER1Q7Z7L7 766 aa6.77□□□□□ -1.33
PNKP-229ENST00000637897 NKAIN4Q8IVV8 208 aa6.77□□□□□ -1.33
PNKP-229ENST00000637897 RNF113BQ8IZP6 322 aaKnown RBP6.77□□□□□ -1.33
PNKP-229ENST00000637897 FBXL14Q8N1E6 418 aa6.77□□□□□ -1.33
PNKP-229ENST00000637897 ARIH2OSQ8N7S6 290 aa6.77□□□□□ -1.33
PNKP-229ENST00000637897 ANKK1Q8NFD2 765 aa6.77□□□□□ -1.33
PNKP-229ENST00000637897 OR8J1Q8NGP2 316 aa6.77□□□□□ -1.33
PNKP-229ENST00000637897 RAB2BQ8WUD1 216 aa6.77□□□□□ -1.33
PNKP-229ENST00000637897 APH1BQ8WW43 257 aa6.77□□□□□ -1.33
PNKP-229ENST00000637897 TMEM54Q969K7 222 aa6.77□□□□□ -1.33
PNKP-229ENST00000637897 UBE2FQ969M7 185 aa6.77□□□□□ -1.33
PNKP-229ENST00000637897 FBXO17Q96EF6 278 aa6.77□□□□□ -1.33
PNKP-229ENST00000637897 SIGLEC11Q96RL6 698 aa6.77□□□□□ -1.33
PNKP-229ENST00000637897 BCL7BQ9BQE9 202 aa6.77□□□□□ -1.33
PNKP-229ENST00000637897 COPS4Q9BT78 406 aa6.77□□□□□ -1.33
PNKP-229ENST00000637897 KATNB1Q9BVA0 655 aa6.77□□□□□ -1.33
PNKP-229ENST00000637897 REPIN1Q9BWE0 567 aaKnown RBP6.77□□□□□ -1.33
PNKP-229ENST00000637897 TEX12Q9BXU0 123 aa6.77□□□□□ -1.33
PNKP-229ENST00000637897 PLK3Q9H4B4 646 aa6.77□□□□□ -1.33
PNKP-229ENST00000637897 SLC25A19Q9HC21 320 aa6.77□□□□□ -1.33
PNKP-229ENST00000637897 OBP2BQ9NPH6 170 aa6.77□□□□□ -1.33
PNKP-229ENST00000637897 C20orf141Q9NUB4 165 aa6.77□□□□□ -1.33
PNKP-229ENST00000637897 FKBP14Q9NWM8 211 aa6.77□□□□□ -1.33
PNKP-229ENST00000637897 CNOT2Q9NZN8 540 aaKnown RBP6.77□□□□□ -1.33
PNKP-229ENST00000637897 ERVK-18Q9QC07 812 aa6.77□□□□□ -1.33
PNKP-229ENST00000637897 POU2F3Q9UKI9 436 aa6.77□□□□□ -1.33
PNKP-229ENST00000637897 MXRA5Q9NR99 2828 aa6.77□□□□□ -1.33
PNKP-229ENST00000637897 CHP2O43745 196 aa6.76□□□□□ -1.33
PNKP-229ENST00000637897 OR2T1O43869 369 aa6.76□□□□□ -1.33
PNKP-229ENST00000637897 SLC43A1O75387 559 aa6.76□□□□□ -1.33
PNKP-229ENST00000637897 MT-ND2P03891 347 aa6.76□□□□□ -1.33
PNKP-229ENST00000637897 CDK1P06493 297 aa6.76□□□□□ -1.33
PNKP-229ENST00000637897 OR4A8P0C604 315 aa6.76□□□□□ -1.33
PNKP-229ENST00000637897 PIPP12273 146 aaPredicted RBP6.76□□□□□ -1.33
PNKP-229ENST00000637897 IFNGR1P15260 489 aa6.76□□□□□ -1.33
PNKP-229ENST00000637897 FUT1P19526 365 aa6.76□□□□□ -1.33
PNKP-229ENST00000637897 FPR3P25089 353 aa6.76□□□□□ -1.33
PNKP-229ENST00000637897 IL2RGP31785 369 aa6.76□□□□□ -1.33
PNKP-229ENST00000637897 GIPRP48546 466 aa6.76□□□□□ -1.33
PNKP-229ENST00000637897 IDH3GP51553 393 aaPredicted RBP6.76□□□□□ -1.33
PNKP-229ENST00000637897 EFNA4P52798 201 aa6.76□□□□□ -1.33
PNKP-229ENST00000637897 NUDT6P53370 316 aa6.76□□□□□ -1.33
PNKP-229ENST00000637897 CDK5Q00535 292 aa6.76□□□□□ -1.33
PNKP-229ENST00000637897 POU3F1Q03052 451 aaPredicted RBP6.76□□□□□ -1.33
PNKP-229ENST00000637897 TGFBR3Q03167 851 aa6.76□□□□□ -1.33
PNKP-229ENST00000637897 PUDPQ08623 228 aa6.76□□□□□ -1.33
PNKP-229ENST00000637897 MFSD13AQ14CX5 517 aa6.76□□□□□ -1.33
PNKP-229ENST00000637897 TBCEQ15813 527 aaPredicted RBP6.76□□□□□ -1.33
PNKP-229ENST00000637897 OCLNQ16625 522 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms