RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 PPP1CBP62140 327 aa15.66■□□□□ 0.1
CLN6-220ENST00000637450 PRKCDQ05655 676 aa15.66■□□□□ 0.1
CLN6-220ENST00000637450 ANKDD1AQ495B1 522 aa15.66■□□□□ 0.1
CLN6-220ENST00000637450 CGB2Q6NT52 195 aa15.66■□□□□ 0.1
CLN6-220ENST00000637450 ZNF774Q6NX45 483 aa15.66■□□□□ 0.1
CLN6-220ENST00000637450 NRMQ8IXM6 262 aa15.66■□□□□ 0.1
CLN6-220ENST00000637450 OR4M2Q8NGB6 313 aa15.66■□□□□ 0.1
CLN6-220ENST00000637450 OR51A7Q8NH64 312 aa15.66■□□□□ 0.1
CLN6-220ENST00000637450 ABHD4Q8TB40 342 aa15.66■□□□□ 0.1
CLN6-220ENST00000637450 LZICQ8WZA0 190 aa15.66■□□□□ 0.1
CLN6-220ENST00000637450 C4orf45Q96LM5 186 aa15.66■□□□□ 0.1
CLN6-220ENST00000637450 EGLN1Q9GZT9 426 aa15.66■□□□□ 0.1
CLN6-220ENST00000637450 ELOVL3Q9HB03 270 aa15.66■□□□□ 0.1
CLN6-220ENST00000637450 FGFR1OP2Q9NVK5 253 aa15.66■□□□□ 0.1
CLN6-220ENST00000637450 ARGLU1Q9NWB6 273 aaPredicted RBP15.66■□□□□ 0.1
CLN6-220ENST00000637450 RHCGQ9UBD6 479 aa15.66■□□□□ 0.1
CLN6-220ENST00000637450 ZDHHC8Q9ULC8 765 aa15.66■□□□□ 0.1
CLN6-220ENST00000637450 SNX13Q9Y5W8 968 aa15.66■□□□□ 0.1
CLN6-220ENST00000637450 TRAV27A0A087WT01 109 aa15.65■□□□□ 0.1
CLN6-220ENST00000637450 A6NIZ1 184 aa15.65■□□□□ 0.1
CLN6-220ENST00000637450 H3BSA7 217 aa15.65■□□□□ 0.1
CLN6-220ENST00000637450 J3QLI3 93 aa15.65■□□□□ 0.1
CLN6-220ENST00000637450 FFAR1O14842 300 aa15.65■□□□□ 0.1
CLN6-220ENST00000637450 RGS9O75916 674 aaPredicted RBP15.65■□□□□ 0.1
CLN6-220ENST00000637450 SASH3O75995 380 aa15.65■□□□□ 0.1
CLN6-220ENST00000637450 SCG5P05408 212 aa15.65■□□□□ 0.1
CLN6-220ENST00000637450 HILS1P60008 231 aa15.65■□□□□ 0.1
CLN6-220ENST00000637450 RAP1BP61224 184 aa15.65■□□□□ 0.1
CLN6-220ENST00000637450 RAP1AP62834 184 aa15.65■□□□□ 0.1
CLN6-220ENST00000637450 SLC3A1Q07837 685 aa15.65■□□□□ 0.1
CLN6-220ENST00000637450 SF3A3Q12874 501 aaKnown RBP eCLIP15.65■□□□□ 0.1
CLN6-220ENST00000637450 ENDOGQ14249 297 aaKnown RBP15.65■□□□□ 0.1
CLN6-220ENST00000637450 TRAM2Q15035 370 aa15.65■□□□□ 0.1
CLN6-220ENST00000637450 C1QL2Q7Z5L3 287 aa15.65■□□□□ 0.1
CLN6-220ENST00000637450 VTCN1Q7Z7D3 282 aa15.65■□□□□ 0.1
CLN6-220ENST00000637450 SYT9Q86SS6 491 aa15.65■□□□□ 0.1
CLN6-220ENST00000637450 OAFQ86UD1 273 aa15.65■□□□□ 0.1
CLN6-220ENST00000637450 RNF113BQ8IZP6 322 aaKnown RBP15.65■□□□□ 0.1
CLN6-220ENST00000637450 OFCC1Q8IZS5 231 aa15.65■□□□□ 0.1
CLN6-220ENST00000637450 DIRC2Q96SL1 478 aa15.65■□□□□ 0.1
CLN6-220ENST00000637450 FNDC11Q9BVV2 318 aa15.65■□□□□ 0.1
CLN6-220ENST00000637450 CMTM6Q9NX76 183 aa15.65■□□□□ 0.1
CLN6-220ENST00000637450 CGGBP1Q9UFW8 167 aaPredicted RBP15.65■□□□□ 0.1
CLN6-220ENST00000637450 A0A1W2PPL8 197 aa15.64■□□□□ 0.09
CLN6-220ENST00000637450 C12orf71A8MTZ7 269 aa15.64■□□□□ 0.09
CLN6-220ENST00000637450 EFCAB9A8MZ26 197 aa15.64■□□□□ 0.09
CLN6-220ENST00000637450 J3KTA2 159 aa15.64■□□□□ 0.09
CLN6-220ENST00000637450 CD55P08174 381 aa15.64■□□□□ 0.09
CLN6-220ENST00000637450 MSR1P21757 451 aa15.64■□□□□ 0.09
CLN6-220ENST00000637450 GATA3P23771 443 aa15.64■□□□□ 0.09
CLN6-220ENST00000637450 SLC9A3P48764 834 aa15.64■□□□□ 0.09
CLN6-220ENST00000637450 COMPP49747 757 aaPredicted RBP15.64■□□□□ 0.09
CLN6-220ENST00000637450 ARHGDIAP52565 204 aa15.64■□□□□ 0.09
CLN6-220ENST00000637450 DCAF12L2Q5VW00 463 aa15.64■□□□□ 0.09
CLN6-220ENST00000637450 ARL9Q6T311 187 aa15.64■□□□□ 0.09
CLN6-220ENST00000637450 PEG10Q86TG7 708 aaKnown RBP15.64■□□□□ 0.09
CLN6-220ENST00000637450 FAM216AQ8WUB2 273 aa15.64■□□□□ 0.09
CLN6-220ENST00000637450 GAL3ST1Q99999 423 aa15.64■□□□□ 0.09
CLN6-220ENST00000637450 WACQ9BTA9 647 aa15.64■□□□□ 0.09
CLN6-220ENST00000637450 POLE4Q9NR33 117 aa15.64■□□□□ 0.09
CLN6-220ENST00000637450 GMPR2Q9P2T1 348 aaKnown RBP15.64■□□□□ 0.09
CLN6-220ENST00000637450 AP3M1Q9Y2T2 418 aa15.64■□□□□ 0.09
CLN6-220ENST00000637450 A0A087WUU8 490 aa15.63■□□□□ 0.09
CLN6-220ENST00000637450 IFNW1P05000 195 aa15.63■□□□□ 0.09
CLN6-220ENST00000637450 COX5BP10606 129 aa15.63■□□□□ 0.09
CLN6-220ENST00000637450 PSG7Q13046 419 aa15.63■□□□□ 0.09
CLN6-220ENST00000637450 SPRNQ5BIV9 151 aa15.63■□□□□ 0.09
CLN6-220ENST00000637450 TBPL2Q6SJ96 375 aa15.63■□□□□ 0.09
CLN6-220ENST00000637450 FAM156AQ8NDB6 213 aa15.63■□□□□ 0.09
CLN6-220ENST00000637450 ACOT11Q8WXI4 607 aaPredicted RBP15.63■□□□□ 0.09
CLN6-220ENST00000637450 RCN3Q96D15 328 aa15.63■□□□□ 0.09
CLN6-220ENST00000637450 MSL2Q9HCI7 577 aa15.63■□□□□ 0.09
CLN6-220ENST00000637450 NDRG4Q9ULP0 352 aaKnown RBP15.63■□□□□ 0.09
CLN6-220ENST00000637450 CAPN7Q9Y6W3 813 aa15.63■□□□□ 0.09
CLN6-220ENST00000637450 TMEM89A2RUT3 159 aa15.62■□□□□ 0.09
CLN6-220ENST00000637450 H7C1C5 153 aa15.62■□□□□ 0.09
CLN6-220ENST00000637450 TRIM77I1YAP6 450 aa15.62■□□□□ 0.09
CLN6-220ENST00000637450 SLC22A2O15244 555 aa15.62■□□□□ 0.09
CLN6-220ENST00000637450 ADRA2CP18825 462 aa15.62■□□□□ 0.09
CLN6-220ENST00000637450 TUBG1P23258 451 aa15.62■□□□□ 0.09
CLN6-220ENST00000637450 LCN6P62502 163 aa15.62■□□□□ 0.09
CLN6-220ENST00000637450 ACTG1P63261 375 aa15.62■□□□□ 0.09
CLN6-220ENST00000637450 CDK5R2Q13319 367 aa15.62■□□□□ 0.09
CLN6-220ENST00000637450 ZMAT1Q5H9K5 638 aa15.62■□□□□ 0.09
CLN6-220ENST00000637450 MTX3Q5HYI7 312 aa15.62■□□□□ 0.09
CLN6-220ENST00000637450 MBOAT2Q6ZWT7 520 aa15.62■□□□□ 0.09
CLN6-220ENST00000637450 ZER1Q7Z7L7 766 aa15.62■□□□□ 0.09
CLN6-220ENST00000637450 SLC15A3Q8IY34 581 aa15.62■□□□□ 0.09
CLN6-220ENST00000637450 OR13C2Q8NGS9 318 aa15.62■□□□□ 0.09
CLN6-220ENST00000637450 NANPQ8TBE9 248 aa15.62■□□□□ 0.09
CLN6-220ENST00000637450 GEMIN6Q8WXD5 167 aaKnown RBP15.62■□□□□ 0.09
CLN6-220ENST00000637450 JMJD8Q96S16 334 aa15.62■□□□□ 0.09
CLN6-220ENST00000637450 C7orf69Q9H7B7 122 aa15.62■□□□□ 0.09
CLN6-220ENST00000637450 EMC7Q9NPA0 242 aa15.62■□□□□ 0.09
CLN6-220ENST00000637450 TUBG2Q9NRH3 451 aa15.62■□□□□ 0.09
CLN6-220ENST00000637450 TBCCD1Q9NVR7 557 aa15.62■□□□□ 0.09
CLN6-220ENST00000637450 ARMCX1Q9P291 453 aa15.62■□□□□ 0.09
CLN6-220ENST00000637450 OPN4Q9UHM6 478 aa15.62■□□□□ 0.09
CLN6-220ENST00000637450 WNK2Q9Y3S1 2297 aa15.62■□□□□ 0.09
CLN6-220ENST00000637450 ISPDA4D126 451 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms