RNA–Protein interactions for RNA: ENST00000637083.1

CLN8-212, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 2,001 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-212ENST00000637083 HLA-DOBP13765 273 aa10.86□□□□□ -0.67
CLN8-212ENST00000637083 CSRP1P21291 193 aaKnown RBP10.86□□□□□ -0.67
CLN8-212ENST00000637083 ADH6P28332 368 aa10.86□□□□□ -0.67
CLN8-212ENST00000637083 EIF1P41567 113 aaKnown RBP10.86□□□□□ -0.67
CLN8-212ENST00000637083 TRA2AQ13595 282 aaKnown RBP eCLIP10.86□□□□□ -0.67
CLN8-212ENST00000637083 ST3GAL2Q16842 350 aa10.86□□□□□ -0.67
CLN8-212ENST00000637083 THEM4Q5T1C6 240 aa10.86□□□□□ -0.67
CLN8-212ENST00000637083 PHF19Q5T6S3 580 aa10.86□□□□□ -0.67
CLN8-212ENST00000637083 MRPL14Q6P1L8 145 aaKnown RBP10.86□□□□□ -0.67
CLN8-212ENST00000637083 KLHL24Q6TFL4 600 aa10.86□□□□□ -0.67
CLN8-212ENST00000637083 ARSKQ6UWY0 536 aa10.86□□□□□ -0.67
CLN8-212ENST00000637083 UEVLDQ8IX04 471 aa10.86□□□□□ -0.67
CLN8-212ENST00000637083 KDM8Q8N371 416 aa10.86□□□□□ -0.67
CLN8-212ENST00000637083 NKAIN3Q8N8D7 197 aa10.86□□□□□ -0.67
CLN8-212ENST00000637083 OR11H7Q8NGC8 314 aa10.86□□□□□ -0.67
CLN8-212ENST00000637083 OR51D1Q8NGF3 324 aa10.86□□□□□ -0.67
CLN8-212ENST00000637083 OR6M1Q8NGM8 313 aa10.86□□□□□ -0.67
CLN8-212ENST00000637083 FOXN4Q96NZ1 517 aa10.86□□□□□ -0.67
CLN8-212ENST00000637083 UTP23Q9BRU9 249 aaKnown RBP10.86□□□□□ -0.67
CLN8-212ENST00000637083 NOX3Q9HBY0 568 aa10.86□□□□□ -0.67
CLN8-212ENST00000637083 PRDM6Q9NQX0 595 aa10.86□□□□□ -0.67
CLN8-212ENST00000637083 RYDENQ9NUL5 291 aaKnown RBP10.86□□□□□ -0.67
CLN8-212ENST00000637083 NKIRAS2Q9NYR9 191 aa10.86□□□□□ -0.67
CLN8-212ENST00000637083 MTFP1Q9UDX5 166 aa10.86□□□□□ -0.67
CLN8-212ENST00000637083 SCP2D1Q9UJQ7 156 aa10.86□□□□□ -0.67
CLN8-212ENST00000637083 OR52A1Q9UKL2 312 aa10.86□□□□□ -0.67
CLN8-212ENST00000637083 CACNA1EQ15878 2313 aa10.86□□□□□ -0.67
CLN8-212ENST00000637083 VPS13AQ96RL7 3174 aa10.86□□□□□ -0.67
CLN8-212ENST00000637083 A0A087WV48 116 aa10.85□□□□□ -0.67
CLN8-212ENST00000637083 A0A0A6YYH2 397 aa10.85□□□□□ -0.67
CLN8-212ENST00000637083 A0A1W2PQ72 361 aa10.85□□□□□ -0.67
CLN8-212ENST00000637083 A6NJ64 397 aa10.85□□□□□ -0.67
CLN8-212ENST00000637083 SULT1C2O00338 296 aa10.85□□□□□ -0.67
CLN8-212ENST00000637083 GMDSO60547 372 aa10.85□□□□□ -0.67
CLN8-212ENST00000637083 CTAG2O75638 210 aa10.85□□□□□ -0.67
CLN8-212ENST00000637083 PNPP00491 289 aa10.85□□□□□ -0.67
CLN8-212ENST00000637083 IL5P05113 134 aa10.85□□□□□ -0.67
CLN8-212ENST00000637083 KLK3P07288 261 aaPredicted RBP10.85□□□□□ -0.67
CLN8-212ENST00000637083 HTR2CP28335 458 aa10.85□□□□□ -0.67
CLN8-212ENST00000637083 POU3F4P49335 361 aa10.85□□□□□ -0.67
CLN8-212ENST00000637083 SNTA1Q13424 505 aa10.85□□□□□ -0.67
CLN8-212ENST00000637083 PLPPR5Q32ZL2 321 aa10.85□□□□□ -0.67
CLN8-212ENST00000637083 C2orf76Q3KRA6 126 aa10.85□□□□□ -0.67
CLN8-212ENST00000637083 DCXRQ7Z4W1 244 aa10.85□□□□□ -0.67
CLN8-212ENST00000637083 OR11G2Q8NGC1 345 aa10.85□□□□□ -0.67
CLN8-212ENST00000637083 OR13C3Q8NGS6 347 aa10.85□□□□□ -0.67
CLN8-212ENST00000637083 ATOH1Q92858 354 aaPredicted RBP10.85□□□□□ -0.67
CLN8-212ENST00000637083 SPACA9Q96E40 222 aaPredicted RBP10.85□□□□□ -0.67
CLN8-212ENST00000637083 SLC25A44Q96H78 314 aaPredicted RBP10.85□□□□□ -0.67
CLN8-212ENST00000637083 GAREM1Q9H706 876 aa10.85□□□□□ -0.67
CLN8-212ENST00000637083 MRPL15Q9P015 296 aaKnown RBP10.85□□□□□ -0.67
CLN8-212ENST00000637083 CPAMD8Q8IZJ3 1885 aa10.85□□□□□ -0.67
CLN8-212ENST00000637083 TMEM269A0A1B0GVZ9 245 aa10.85□□□□□ -0.67
CLN8-212ENST00000637083 H3BML4 177 aa10.85□□□□□ -0.67
CLN8-212ENST00000637083 SRSF10O75494 262 aaKnown RBP10.85□□□□□ -0.67
CLN8-212ENST00000637083 OR2J2O76002 312 aa10.85□□□□□ -0.67
CLN8-212ENST00000637083 CD37P11049 281 aa10.85□□□□□ -0.67
CLN8-212ENST00000637083 NR2C1P13056 603 aa10.85□□□□□ -0.67
CLN8-212ENST00000637083 CPN1P15169 458 aa10.85□□□□□ -0.67
CLN8-212ENST00000637083 IGFBP3P17936 291 aaPredicted RBP10.85□□□□□ -0.67
CLN8-212ENST00000637083 IL11P20809 199 aa10.85□□□□□ -0.67
CLN8-212ENST00000637083 PRSS3P35030 304 aa10.85□□□□□ -0.67
CLN8-212ENST00000637083 Q5BKY6 102 aa10.85□□□□□ -0.67
CLN8-212ENST00000637083 LRFN4Q6PJG9 635 aa10.85□□□□□ -0.67
CLN8-212ENST00000637083 LYPD8Q6UX82 237 aa10.85□□□□□ -0.67
CLN8-212ENST00000637083 OR4K17Q8NGC6 315 aa10.85□□□□□ -0.67
CLN8-212ENST00000637083 IFI44Q8TCB0 444 aa10.85□□□□□ -0.67
CLN8-212ENST00000637083 ST7LQ8TDW4 575 aa10.85□□□□□ -0.67
CLN8-212ENST00000637083 PIGKQ92643 395 aa10.85□□□□□ -0.67
CLN8-212ENST00000637083 RADILQ96JH8 1075 aa10.85□□□□□ -0.67
CLN8-212ENST00000637083 FSCN3Q9NQT6 498 aa10.85□□□□□ -0.67
CLN8-212ENST00000637083 MGAT4AQ9UM21 535 aa10.85□□□□□ -0.67
CLN8-212ENST00000637083 EMC9Q9Y3B6 208 aa10.85□□□□□ -0.67
CLN8-212ENST00000637083 MUC3AQ02505 3323 aa10.84□□□□□ -0.67
CLN8-212ENST00000637083 WDR87Q6ZQQ6 2873 aa10.84□□□□□ -0.67
CLN8-212ENST00000637083 A0A087WZY1 265 aa10.84□□□□□ -0.67
CLN8-212ENST00000637083 SNRPGP15A8MWD9 76 aa10.84□□□□□ -0.67
CLN8-212ENST00000637083 NDUFB6O95139 128 aa10.84□□□□□ -0.67
CLN8-212ENST00000637083 IGHG1P01857 330 aa10.84□□□□□ -0.67
CLN8-212ENST00000637083 ITGA5P08648 1049 aa10.84□□□□□ -0.67
CLN8-212ENST00000637083 MMP16P51512 607 aa10.84□□□□□ -0.67
CLN8-212ENST00000637083 MECP2P51608 486 aaKnown RBP10.84□□□□□ -0.67
CLN8-212ENST00000637083 BIDP55957 195 aa10.84□□□□□ -0.67
CLN8-212ENST00000637083 CLRN1P58418 232 aa10.84□□□□□ -0.67
CLN8-212ENST00000637083 ACTBP60709 375 aa10.84□□□□□ -0.67
CLN8-212ENST00000637083 ACTG1P63261 375 aa10.84□□□□□ -0.67
CLN8-212ENST00000637083 MFGE8Q08431 387 aaPredicted RBP10.84□□□□□ -0.67
CLN8-212ENST00000637083 RBMS2Q15434 407 aaKnown RBP10.84□□□□□ -0.67
CLN8-212ENST00000637083 PCGF3Q3KNV8 242 aa10.84□□□□□ -0.67
CLN8-212ENST00000637083 FAM166AQ6J272 317 aa10.84□□□□□ -0.67
CLN8-212ENST00000637083 GLDNQ6ZMI3 551 aaPredicted RBP10.84□□□□□ -0.67
CLN8-212ENST00000637083 C9orf62Q8N4C0 152 aa10.84□□□□□ -0.67
CLN8-212ENST00000637083 MEIOBQ8N635 442 aa10.84□□□□□ -0.67
CLN8-212ENST00000637083 OR2M3Q8NG83 312 aa10.84□□□□□ -0.67
CLN8-212ENST00000637083 OR1J4Q8NGS1 313 aa10.84□□□□□ -0.67
CLN8-212ENST00000637083 ELP5Q8TE02 316 aa10.84□□□□□ -0.67
CLN8-212ENST00000637083 RNF133Q8WVZ7 376 aa10.84□□□□□ -0.67
CLN8-212ENST00000637083 PTX4Q96A99 478 aa10.84□□□□□ -0.67
CLN8-212ENST00000637083 GUCD1Q96NT3 240 aa10.84□□□□□ -0.67
CLN8-212ENST00000637083 MESP1Q9BRJ9 268 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms