RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 OR56B2PQ8NGI1 322 aa10.37□□□□□ -0.75
CLN6-217ENST00000636964 NXPE2Q96DL1 559 aa10.37□□□□□ -0.75
CLN6-217ENST00000636964 NUDT16L1Q9BRJ7 211 aaKnown RBP10.37□□□□□ -0.75
CLN6-217ENST00000636964 ALG8Q9BVK2 526 aa10.37□□□□□ -0.75
CLN6-217ENST00000636964 BAIAP2Q9UQB8 552 aa10.37□□□□□ -0.75
CLN6-217ENST00000636964 VDAC3Q9Y277 283 aa10.37□□□□□ -0.75
CLN6-217ENST00000636964 SHISA8B8ZZ34 492 aa10.37□□□□□ -0.75
CLN6-217ENST00000636964 C11orf98E9PRG8 122 aa10.37□□□□□ -0.75
CLN6-217ENST00000636964 H7C1C5 153 aa10.37□□□□□ -0.75
CLN6-217ENST00000636964 J3QRE1 110 aa10.37□□□□□ -0.75
CLN6-217ENST00000636964 CASKO14936 926 aa10.37□□□□□ -0.75
CLN6-217ENST00000636964 PLATP00750 562 aa10.37□□□□□ -0.75
CLN6-217ENST00000636964 SULT1A3P0DMM9 295 aa10.37□□□□□ -0.75
CLN6-217ENST00000636964 SULT1A4P0DMN0 295 aa10.37□□□□□ -0.75
CLN6-217ENST00000636964 SLC2A5P22732 501 aa10.37□□□□□ -0.75
CLN6-217ENST00000636964 PTBP1P26599 531 aaKnown RBP eCLIP10.37□□□□□ -0.75
CLN6-217ENST00000636964 LCN6P62502 163 aa10.37□□□□□ -0.75
CLN6-217ENST00000636964 GLO1Q04760 184 aa10.37□□□□□ -0.75
CLN6-217ENST00000636964 ALG10Q5BKT4 473 aa10.37□□□□□ -0.75
CLN6-217ENST00000636964 DEGS2Q6QHC5 323 aa10.37□□□□□ -0.75
CLN6-217ENST00000636964 ZNF322Q6U7Q0 402 aaPredicted RBP10.37□□□□□ -0.75
CLN6-217ENST00000636964 C17orf107Q6ZR85 190 aa10.37□□□□□ -0.75
CLN6-217ENST00000636964 GPR119Q8TDV5 335 aa10.37□□□□□ -0.75
CLN6-217ENST00000636964 SMPDL3BQ92485 455 aa10.37□□□□□ -0.75
CLN6-217ENST00000636964 ABCG5Q9H222 651 aa10.37□□□□□ -0.75
CLN6-217ENST00000636964 ADGRL4Q9HBW9 690 aa10.37□□□□□ -0.75
CLN6-217ENST00000636964 NRIP3Q9NQ35 241 aa10.37□□□□□ -0.75
CLN6-217ENST00000636964 MYOTQ9UBF9 498 aa10.37□□□□□ -0.75
CLN6-217ENST00000636964 RALGAPA1Q6GYQ0 2036 aa10.37□□□□□ -0.75
CLN6-217ENST00000636964 ADAM10O14672 748 aa10.36□□□□□ -0.75
CLN6-217ENST00000636964 TCAPO15273 167 aa10.36□□□□□ -0.75
CLN6-217ENST00000636964 SLC31A2O15432 143 aa10.36□□□□□ -0.75
CLN6-217ENST00000636964 SLC25A12O75746 678 aa10.36□□□□□ -0.75
CLN6-217ENST00000636964 HPXP02790 462 aa10.36□□□□□ -0.75
CLN6-217ENST00000636964 SBK2P0C263 348 aa10.36□□□□□ -0.75
CLN6-217ENST00000636964 DNASE1P24855 282 aa10.36□□□□□ -0.75
CLN6-217ENST00000636964 CDKN2AP42771 156 aaKnown RBP10.36□□□□□ -0.75
CLN6-217ENST00000636964 TAS2R60P59551 318 aa10.36□□□□□ -0.75
CLN6-217ENST00000636964 TRA2AQ13595 282 aaKnown RBP eCLIP10.36□□□□□ -0.75
CLN6-217ENST00000636964 TPBGQ13641 420 aa10.36□□□□□ -0.75
CLN6-217ENST00000636964 CD276Q5ZPR3 534 aa10.36□□□□□ -0.75
CLN6-217ENST00000636964 ETFRF1Q6IPR1 90 aa10.36□□□□□ -0.75
CLN6-217ENST00000636964 NPEPL1Q8NDH3 523 aa10.36□□□□□ -0.75
CLN6-217ENST00000636964 OR6K6Q8NGW6 343 aa10.36□□□□□ -0.75
CLN6-217ENST00000636964 NUBPLQ8TB37 319 aa10.36□□□□□ -0.75
CLN6-217ENST00000636964 AP3S1Q92572 193 aa10.36□□□□□ -0.75
CLN6-217ENST00000636964 TIMP4Q99727 224 aa10.36□□□□□ -0.75
CLN6-217ENST00000636964 EDEM2Q9BV94 578 aa10.36□□□□□ -0.75
CLN6-217ENST00000636964 DEFB126Q9BYW3 111 aa10.36□□□□□ -0.75
CLN6-217ENST00000636964 SLC26A1Q9H2B4 701 aa10.36□□□□□ -0.75
CLN6-217ENST00000636964 TAS2R10Q9NYW0 307 aa10.36□□□□□ -0.75
CLN6-217ENST00000636964 KLRF1Q9NZS2 232 aa10.36□□□□□ -0.75
CLN6-217ENST00000636964 SIRT4Q9Y6E7 314 aaPredicted RBP10.36□□□□□ -0.75
CLN6-217ENST00000636964 TMED7-TICAM2A0A0A6YYA0 188 aa10.36□□□□□ -0.75
CLN6-217ENST00000636964 HSBP1L1C9JCN9 74 aa10.36□□□□□ -0.75
CLN6-217ENST00000636964 SUSD5O60279 629 aa10.36□□□□□ -0.75
CLN6-217ENST00000636964 ZFAND5O76080 213 aa10.36□□□□□ -0.75
CLN6-217ENST00000636964 ONECUT2O95948 504 aa10.36□□□□□ -0.75
CLN6-217ENST00000636964 PLGP00747 810 aaPredicted RBP10.36□□□□□ -0.75
CLN6-217ENST00000636964 UMODP07911 640 aa10.36□□□□□ -0.75
CLN6-217ENST00000636964 NMBP08949 121 aa10.36□□□□□ -0.75
CLN6-217ENST00000636964 RD3LP0DJH9 198 aa10.36□□□□□ -0.75
CLN6-217ENST00000636964 CXCL2P19875 107 aa10.36□□□□□ -0.75
CLN6-217ENST00000636964 ACP1P24666 158 aa10.36□□□□□ -0.75
CLN6-217ENST00000636964 LCN1P31025 176 aa10.36□□□□□ -0.75
CLN6-217ENST00000636964 FGF9P31371 208 aaPredicted RBP10.36□□□□□ -0.75
CLN6-217ENST00000636964 PRPS1P60891 318 aa10.36□□□□□ -0.75
CLN6-217ENST00000636964 RPS4XP62701 263 aaKnown RBP10.36□□□□□ -0.75
CLN6-217ENST00000636964 RPL18Q07020 188 aaKnown RBP10.36□□□□□ -0.75
CLN6-217ENST00000636964 LEG1Q6P5S2 330 aa10.36□□□□□ -0.75
CLN6-217ENST00000636964 SSX6Q7RTT6 188 aa10.36□□□□□ -0.75
CLN6-217ENST00000636964 OR10G3Q8NGC4 313 aa10.36□□□□□ -0.75
CLN6-217ENST00000636964 RNASE11Q8TAA1 199 aaKnown RBP10.36□□□□□ -0.75
CLN6-217ENST00000636964 SNX33Q8WV41 574 aa10.36□□□□□ -0.75
CLN6-217ENST00000636964 CMKLR1Q99788 373 aa10.36□□□□□ -0.75
CLN6-217ENST00000636964 THAP7Q9BT49 309 aaPredicted RBP10.36□□□□□ -0.75
CLN6-217ENST00000636964 HDHD2Q9H0R4 259 aa10.36□□□□□ -0.75
CLN6-217ENST00000636964 C19orf25Q9UFG5 118 aaPredicted RBP10.36□□□□□ -0.75
CLN6-217ENST00000636964 TMED7Q9Y3B3 224 aa10.36□□□□□ -0.75
CLN6-217ENST00000636964 MED12Q93074 2177 aa10.36□□□□□ -0.75
CLN6-217ENST00000636964 TMEM72A0PK05 275 aa10.36□□□□□ -0.75
CLN6-217ENST00000636964 E9PI62 339 aa10.36□□□□□ -0.75
CLN6-217ENST00000636964 J3QLW9 94 aa10.36□□□□□ -0.75
CLN6-217ENST00000636964 KLF7O75840 302 aaPredicted RBP10.36□□□□□ -0.75
CLN6-217ENST00000636964 HIST1H2ABP04908 130 aa10.36□□□□□ -0.75
CLN6-217ENST00000636964 EIF4EP06730 217 aaKnown RBP10.36□□□□□ -0.75
CLN6-217ENST00000636964 ASAH2BP0C7U1 165 aa10.36□□□□□ -0.75
CLN6-217ENST00000636964 ZNF19P17023 458 aa10.36□□□□□ -0.75
CLN6-217ENST00000636964 AHCYP23526 432 aa10.36□□□□□ -0.75
CLN6-217ENST00000636964 PYCR1P32322 319 aa10.36□□□□□ -0.75
CLN6-217ENST00000636964 CCR6P51684 374 aa10.36□□□□□ -0.75
CLN6-217ENST00000636964 RPS18P62269 152 aaKnown RBP10.36□□□□□ -0.75
CLN6-217ENST00000636964 SFRP5Q5T4F7 317 aa10.36□□□□□ -0.75
CLN6-217ENST00000636964 FAM198BQ6UWH4 519 aa10.36□□□□□ -0.75
CLN6-217ENST00000636964 HIST3H2AQ7L7L0 130 aa10.36□□□□□ -0.75
CLN6-217ENST00000636964 OR5L2Q8NGL0 311 aa10.36□□□□□ -0.75
CLN6-217ENST00000636964 HIST1H2ACQ93077 130 aa10.36□□□□□ -0.75
CLN6-217ENST00000636964 ABHD1Q96SE0 405 aa10.36□□□□□ -0.75
CLN6-217ENST00000636964 CLEC4MQ9H2X3 399 aaPredicted RBP10.36□□□□□ -0.75
CLN6-217ENST00000636964 OR51M1Q9H341 326 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms