RNA–Protein interactions for RNA: ENST00000634433.1

BRCA1-230, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-230ENST00000634433 ZNF417Q8TAU3 575 aa6.42□□□□□ -1.38
BRCA1-230ENST00000634433 CPT1CQ8TCG5 803 aa6.42□□□□□ -1.38
BRCA1-230ENST00000634433 RPS4Y2Q8TD47 263 aa6.42□□□□□ -1.38
BRCA1-230ENST00000634433 ZNRF4Q8WWF5 429 aa6.42□□□□□ -1.38
BRCA1-230ENST00000634433 PMEPA1Q969W9 287 aa6.42□□□□□ -1.38
BRCA1-230ENST00000634433 IMMP1LQ96LU5 166 aa6.42□□□□□ -1.38
BRCA1-230ENST00000634433 ZNF587Q96SQ5 575 aaPredicted RBP6.42□□□□□ -1.38
BRCA1-230ENST00000634433 SDHCQ99643 169 aaPredicted RBP6.42□□□□□ -1.38
BRCA1-230ENST00000634433 KCNJ15Q99712 375 aa6.42□□□□□ -1.38
BRCA1-230ENST00000634433 SYT4Q9H2B2 425 aa6.42□□□□□ -1.38
BRCA1-230ENST00000634433 GALNT9Q9HCQ5 603 aa6.42□□□□□ -1.38
BRCA1-230ENST00000634433 CHST11Q9NPF2 352 aa6.42□□□□□ -1.38
BRCA1-230ENST00000634433 PADI1Q9ULC6 663 aa6.42□□□□□ -1.38
BRCA1-230ENST00000634433 B3GALT5Q9Y2C3 310 aa6.42□□□□□ -1.38
BRCA1-230ENST00000634433 LAMA1P25391 3075 aa6.42□□□□□ -1.38
BRCA1-230ENST00000634433 C17orf51A8MQB3 221 aa6.42□□□□□ -1.38
BRCA1-230ENST00000634433 NOTOA8MTQ0 251 aa6.42□□□□□ -1.38
BRCA1-230ENST00000634433 FTCDNL1E5RQL4 147 aa6.42□□□□□ -1.38
BRCA1-230ENST00000634433 NPIPA5E9PKD4 350 aa6.42□□□□□ -1.38
BRCA1-230ENST00000634433 SEC14L5O43304 696 aa6.42□□□□□ -1.38
BRCA1-230ENST00000634433 HPGDSO60760 199 aa6.42□□□□□ -1.38
BRCA1-230ENST00000634433 HLA-DQA2P01906 255 aa6.42□□□□□ -1.38
BRCA1-230ENST00000634433 UCHL1P09936 223 aa6.42□□□□□ -1.38
BRCA1-230ENST00000634433 ARL3P36405 182 aa6.42□□□□□ -1.38
BRCA1-230ENST00000634433 CASP3P42574 277 aa6.42□□□□□ -1.38
BRCA1-230ENST00000634433 RANBP1P43487 201 aa6.42□□□□□ -1.38
BRCA1-230ENST00000634433 RIN1Q13671 783 aa6.42□□□□□ -1.38
BRCA1-230ENST00000634433 INSL4Q14641 139 aa6.42□□□□□ -1.38
BRCA1-230ENST00000634433 LPAL2Q16609 132 aa6.42□□□□□ -1.38
BRCA1-230ENST00000634433 HSD17B12Q53GQ0 312 aa6.42□□□□□ -1.38
BRCA1-230ENST00000634433 CEP78Q5JTW2 689 aa6.42□□□□□ -1.38
BRCA1-230ENST00000634433 ZNF684Q5T5D7 378 aa6.42□□□□□ -1.38
BRCA1-230ENST00000634433 SFXN4Q6P4A7 337 aa6.42□□□□□ -1.38
BRCA1-230ENST00000634433 FAM199XQ6PEV8 388 aaPredicted RBP6.42□□□□□ -1.38
BRCA1-230ENST00000634433 RPTNQ6XPR3 784 aa6.42□□□□□ -1.38
BRCA1-230ENST00000634433 HDDC2Q7Z4H3 204 aa6.42□□□□□ -1.38
BRCA1-230ENST00000634433 LRRC28Q86X40 367 aaPredicted RBP6.42□□□□□ -1.38
BRCA1-230ENST00000634433 PM20D2Q8IYS1 436 aa6.42□□□□□ -1.38
BRCA1-230ENST00000634433 ADPRHL1Q8NDY3 354 aa6.42□□□□□ -1.38
BRCA1-230ENST00000634433 C19orf18Q8NEA5 215 aa6.42□□□□□ -1.38
BRCA1-230ENST00000634433 OR10G3Q8NGC4 313 aa6.42□□□□□ -1.38
BRCA1-230ENST00000634433 OR6N2Q8NGY6 317 aa6.42□□□□□ -1.38
BRCA1-230ENST00000634433 SLC25A43Q8WUT9 341 aaPredicted RBP6.42□□□□□ -1.38
BRCA1-230ENST00000634433 TSSK2Q96PF2 358 aa6.42□□□□□ -1.38
BRCA1-230ENST00000634433 UBL7Q96S82 380 aaPredicted RBP6.42□□□□□ -1.38
BRCA1-230ENST00000634433 SOSTQ9BQB4 213 aa6.42□□□□□ -1.38
BRCA1-230ENST00000634433 OR11A1Q9GZK7 315 aa6.42□□□□□ -1.38
BRCA1-230ENST00000634433 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.42□□□□□ -1.38
BRCA1-230ENST00000634433 SLITRK2Q9H156 845 aa6.42□□□□□ -1.38
BRCA1-230ENST00000634433 AKIRIN1Q9H9L7 192 aaPredicted RBP6.42□□□□□ -1.38
BRCA1-230ENST00000634433 NGBQ9NPG2 151 aa6.42□□□□□ -1.38
BRCA1-230ENST00000634433 TIGARQ9NQ88 270 aa6.42□□□□□ -1.38
BRCA1-230ENST00000634433 POLE4Q9NR33 117 aa6.42□□□□□ -1.38
BRCA1-230ENST00000634433 ACOXLQ9NUZ1 547 aa6.42□□□□□ -1.38
BRCA1-230ENST00000634433 ALKBH4Q9NXW9 302 aa6.42□□□□□ -1.38
BRCA1-230ENST00000634433 ABRACLQ9P1F3 81 aa6.42□□□□□ -1.38
BRCA1-230ENST00000634433 NPIPA1Q9UND3 350 aa6.42□□□□□ -1.38
BRCA1-230ENST00000634433 VDAC3Q9Y277 283 aa6.42□□□□□ -1.38
BRCA1-230ENST00000634433 GRIP1Q9Y3R0 1128 aa6.42□□□□□ -1.38
BRCA1-230ENST00000634433 MPDZO75970 2070 aa6.42□□□□□ -1.38
BRCA1-230ENST00000634433 NSG1A0A0A6YYJ2 146 aa6.41□□□□□ -1.38
BRCA1-230ENST00000634433 LOC105371267A0A1B0GV96 52 aa6.41□□□□□ -1.38
BRCA1-230ENST00000634433 A0A1W2PQ72 361 aa6.41□□□□□ -1.38
BRCA1-230ENST00000634433 SLC22A23A1A5C7 686 aa6.41□□□□□ -1.38
BRCA1-230ENST00000634433 ANKRD34BA5PLL1 514 aa6.41□□□□□ -1.38
BRCA1-230ENST00000634433 ITGA10O75578 1167 aa6.41□□□□□ -1.38
BRCA1-230ENST00000634433 KLF7O75840 302 aaPredicted RBP6.41□□□□□ -1.38
BRCA1-230ENST00000634433 NCR1O76036 304 aa6.41□□□□□ -1.38
BRCA1-230ENST00000634433 UMODP07911 640 aa6.41□□□□□ -1.38
BRCA1-230ENST00000634433 RAB40ALP0C0E4 278 aa6.41□□□□□ -1.38
BRCA1-230ENST00000634433 STAG3L3P0CL85 134 aa6.41□□□□□ -1.38
BRCA1-230ENST00000634433 COX6A1P12074 109 aa6.41□□□□□ -1.38
BRCA1-230ENST00000634433 IL7P13232 177 aa6.41□□□□□ -1.38
BRCA1-230ENST00000634433 ALOX5APP20292 161 aa6.41□□□□□ -1.38
BRCA1-230ENST00000634433 APEX1P27695 318 aaKnown RBP6.41□□□□□ -1.38
BRCA1-230ENST00000634433 MC5RP33032 325 aa6.41□□□□□ -1.38
BRCA1-230ENST00000634433 PTGDSP41222 190 aa6.41□□□□□ -1.38
BRCA1-230ENST00000634433 ECI1P42126 302 aa6.41□□□□□ -1.38
BRCA1-230ENST00000634433 SSR4P51571 173 aa6.41□□□□□ -1.38
BRCA1-230ENST00000634433 TLE3Q04726 772 aa6.41□□□□□ -1.38
BRCA1-230ENST00000634433 RASGEF1BQ0VAM2 473 aa6.41□□□□□ -1.38
BRCA1-230ENST00000634433 FOXF1Q12946 379 aa6.41□□□□□ -1.38
BRCA1-230ENST00000634433 ALKBH1Q13686 389 aaKnown RBP6.41□□□□□ -1.38
BRCA1-230ENST00000634433 OR7A5Q15622 319 aa6.41□□□□□ -1.38
BRCA1-230ENST00000634433 ZNF79Q15937 498 aa6.41□□□□□ -1.38
BRCA1-230ENST00000634433 PLPPR5Q32ZL2 321 aa6.41□□□□□ -1.38
BRCA1-230ENST00000634433 TRIQKQ629K1 86 aa6.41□□□□□ -1.38
BRCA1-230ENST00000634433 THOC7Q6I9Y2 204 aaKnown RBP6.41□□□□□ -1.38
BRCA1-230ENST00000634433 SLC18B1Q6NT16 456 aa6.41□□□□□ -1.38
BRCA1-230ENST00000634433 C3orf33Q6P1S2 294 aa6.41□□□□□ -1.38
BRCA1-230ENST00000634433 CNIH2Q6PI25 160 aa6.41□□□□□ -1.38
BRCA1-230ENST00000634433 KCTD18Q6PI47 426 aaPredicted RBP6.41□□□□□ -1.38
BRCA1-230ENST00000634433 ZNF704Q6ZNC4 412 aaPredicted RBP6.41□□□□□ -1.38
BRCA1-230ENST00000634433 OR2M3Q8NG83 312 aa6.41□□□□□ -1.38
BRCA1-230ENST00000634433 OR5AK2Q8NH90 309 aa6.41□□□□□ -1.38
BRCA1-230ENST00000634433 RNASE8Q8TDE3 154 aaKnown RBP6.41□□□□□ -1.38
BRCA1-230ENST00000634433 THEM6Q8WUY1 208 aa6.41□□□□□ -1.38
BRCA1-230ENST00000634433 ZBTB8AQ96BR9 441 aa6.41□□□□□ -1.38
BRCA1-230ENST00000634433 ITPKCQ96DU7 683 aa6.41□□□□□ -1.38
BRCA1-230ENST00000634433 NEIL1Q96FI4 390 aaPredicted RBP6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms