RNA–Protein interactions for RNA: ENST00000634178.1

TRAPPC9-216, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2

Gene TRAPPC9, Length 455 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-216ENST00000634178 STMN2Q93045 179 aa3.84□□□□□ -1.79
TRAPPC9-216ENST00000634178 C1orf147Q96MC9 270 aaPredicted RBP3.84□□□□□ -1.79
TRAPPC9-216ENST00000634178 SRXN1Q9BYN0 137 aa3.84□□□□□ -1.79
TRAPPC9-216ENST00000634178 CHIAQ9BZP6 476 aa3.84□□□□□ -1.79
TRAPPC9-216ENST00000634178 NMUR2Q9GZQ4 415 aa3.84□□□□□ -1.79
TRAPPC9-216ENST00000634178 LHX5Q9H2C1 402 aa3.84□□□□□ -1.79
TRAPPC9-216ENST00000634178 ANKRD19PQ9H560 264 aa3.84□□□□□ -1.79
TRAPPC9-216ENST00000634178 NMRAL1Q9HBL8 299 aa3.84□□□□□ -1.79
TRAPPC9-216ENST00000634178 NT5MQ9NPB1 228 aa3.84□□□□□ -1.79
TRAPPC9-216ENST00000634178 RPL36Q9Y3U8 105 aaKnown RBP3.84□□□□□ -1.79
TRAPPC9-216ENST00000634178 RP1L1Q8IWN7 2480 aaPredicted RBP3.84□□□□□ -1.8
TRAPPC9-216ENST00000634178 CSMD2Q7Z408 3487 aa3.84□□□□□ -1.8
TRAPPC9-216ENST00000634178 SCN8AQ9UQD0 1980 aa3.83□□□□□ -1.8
TRAPPC9-216ENST00000634178 ESPL1Q14674 2120 aa3.83□□□□□ -1.8
TRAPPC9-216ENST00000634178 IGHV3-35A0A0C4DH35 117 aa3.83□□□□□ -1.8
TRAPPC9-216ENST00000634178 A0A1W2PNU3 283 aaPredicted RBP3.83□□□□□ -1.8
TRAPPC9-216ENST00000634178 FAM92AA1XBS5 289 aa3.83□□□□□ -1.8
TRAPPC9-216ENST00000634178 VPS37CA5D8V6 355 aaPredicted RBP3.83□□□□□ -1.8
TRAPPC9-216ENST00000634178 KRTAP16-1A8MUX0 517 aa3.83□□□□□ -1.8
TRAPPC9-216ENST00000634178 ZNF705EA8MWA4 302 aaPredicted RBP3.83□□□□□ -1.8
TRAPPC9-216ENST00000634178 WWP2O00308 870 aa3.83□□□□□ -1.8
TRAPPC9-216ENST00000634178 NVLO15381 856 aaKnown RBP3.83□□□□□ -1.8
TRAPPC9-216ENST00000634178 PHF1O43189 567 aaPredicted RBP3.83□□□□□ -1.8
TRAPPC9-216ENST00000634178 COCHO43405 550 aa3.83□□□□□ -1.8
TRAPPC9-216ENST00000634178 LATO43561 262 aa3.83□□□□□ -1.8
TRAPPC9-216ENST00000634178 LYPD3O95274 346 aa3.83□□□□□ -1.8
TRAPPC9-216ENST00000634178 ZDHHC11BP0C7U3 371 aa3.83□□□□□ -1.8
TRAPPC9-216ENST00000634178 LIPCP11150 499 aa3.83□□□□□ -1.8
TRAPPC9-216ENST00000634178 ATP1B2P14415 290 aaPredicted RBP3.83□□□□□ -1.8
TRAPPC9-216ENST00000634178 ETS2P15036 469 aa3.83□□□□□ -1.8
TRAPPC9-216ENST00000634178 ZP3P21754 424 aa3.83□□□□□ -1.8
TRAPPC9-216ENST00000634178 GALP22466 123 aa3.83□□□□□ -1.8
TRAPPC9-216ENST00000634178 CDK16Q00536 496 aa3.83□□□□□ -1.8
TRAPPC9-216ENST00000634178 PRR4Q16378 134 aa3.83□□□□□ -1.8
TRAPPC9-216ENST00000634178 Q1RN00 199 aa3.83□□□□□ -1.8
TRAPPC9-216ENST00000634178 LRRC36Q1X8D7 754 aa3.83□□□□□ -1.8
TRAPPC9-216ENST00000634178 OR2B11Q5JQS5 317 aa3.83□□□□□ -1.8
TRAPPC9-216ENST00000634178 SAMD4BQ5PRF9 694 aaKnown RBP3.83□□□□□ -1.8
TRAPPC9-216ENST00000634178 FHL5Q5TD97 284 aa3.83□□□□□ -1.8
TRAPPC9-216ENST00000634178 MARC1Q5VT66 337 aa3.83□□□□□ -1.8
TRAPPC9-216ENST00000634178 SDHAF4Q5VUM1 108 aa3.83□□□□□ -1.8
TRAPPC9-216ENST00000634178 RAET1LQ5VY80 246 aa3.83□□□□□ -1.8
TRAPPC9-216ENST00000634178 RNASEKQ6P5S7 137 aaKnown RBP3.83□□□□□ -1.8
TRAPPC9-216ENST00000634178 ENPP6Q6UWR7 440 aa3.83□□□□□ -1.8
TRAPPC9-216ENST00000634178 LRRC74BQ6ZQY2 392 aa3.83□□□□□ -1.8
TRAPPC9-216ENST00000634178 NUDCD3Q8IVD9 361 aa3.83□□□□□ -1.8
TRAPPC9-216ENST00000634178 DAW1Q8N136 415 aa3.83□□□□□ -1.8
TRAPPC9-216ENST00000634178 PDCL2Q8N4E4 241 aa3.83□□□□□ -1.8
TRAPPC9-216ENST00000634178 LRRC52Q8N7C0 313 aa3.83□□□□□ -1.8
TRAPPC9-216ENST00000634178 TMEM161BQ8NDZ6 487 aa3.83□□□□□ -1.8
TRAPPC9-216ENST00000634178 OR9A1PQ8NGU1 263 aa3.83□□□□□ -1.8
TRAPPC9-216ENST00000634178 RHOXF1Q8NHV9 184 aa3.83□□□□□ -1.8
TRAPPC9-216ENST00000634178 ERMNQ8TAM6 284 aa3.83□□□□□ -1.8
TRAPPC9-216ENST00000634178 ZNF641Q96N77 438 aaPredicted RBP3.83□□□□□ -1.8
TRAPPC9-216ENST00000634178 TSNARE1Q96NA8 513 aa3.83□□□□□ -1.8
TRAPPC9-216ENST00000634178 SIGLEC12Q96PQ1 595 aa3.83□□□□□ -1.8
TRAPPC9-216ENST00000634178 MAPKAP1Q9BPZ7 522 aa3.83□□□□□ -1.8
TRAPPC9-216ENST00000634178 BBS2Q9BXC9 721 aa3.83□□□□□ -1.8
TRAPPC9-216ENST00000634178 KRTAP2-2Q9BYT5 123 aa3.83□□□□□ -1.8
TRAPPC9-216ENST00000634178 GFRA4Q9GZZ7 299 aa3.83□□□□□ -1.8
TRAPPC9-216ENST00000634178 RBKSQ9H477 322 aa3.83□□□□□ -1.8
TRAPPC9-216ENST00000634178 IL37Q9NZH6 218 aa3.83□□□□□ -1.8
TRAPPC9-216ENST00000634178 PAK5Q9P286 719 aa3.83□□□□□ -1.8
TRAPPC9-216ENST00000634178 HIVEP3Q5T1R4 2406 aa3.83□□□□□ -1.8
TRAPPC9-216ENST00000634178 SVILO95425 2214 aa3.82□□□□□ -1.8
TRAPPC9-216ENST00000634178 RP1P56715 2156 aa3.82□□□□□ -1.8
TRAPPC9-216ENST00000634178 PTPRJQ12913 1337 aa3.82□□□□□ -1.8
TRAPPC9-216ENST00000634178 IGLV8-61A0A075B6I0 122 aa3.82□□□□□ -1.8
TRAPPC9-216ENST00000634178 A0A087WWV3 80 aa3.82□□□□□ -1.8
TRAPPC9-216ENST00000634178 IGHV7-81A0A0B4J1V7 117 aa3.82□□□□□ -1.8
TRAPPC9-216ENST00000634178 TCRBV9S1A1TA0A576 114 aa3.82□□□□□ -1.8
TRAPPC9-216ENST00000634178 FRG2CA6NGY1 282 aa3.82□□□□□ -1.8
TRAPPC9-216ENST00000634178 TMX2-CTNND1H3BSU7 103 aa3.82□□□□□ -1.8
TRAPPC9-216ENST00000634178 NEMFO60524 1076 aa3.82□□□□□ -1.8
TRAPPC9-216ENST00000634178 KLHL41O60662 606 aa3.82□□□□□ -1.8
TRAPPC9-216ENST00000634178 HUS1O60921 280 aa3.82□□□□□ -1.8
TRAPPC9-216ENST00000634178 UPK3AO75631 287 aa3.82□□□□□ -1.8
TRAPPC9-216ENST00000634178 CRYGBP07316 175 aa3.82□□□□□ -1.8
TRAPPC9-216ENST00000634178 GIMD1P0DJR0 217 aa3.82□□□□□ -1.8
TRAPPC9-216ENST00000634178 GDF1P27539 372 aa3.82□□□□□ -1.8
TRAPPC9-216ENST00000634178 CD82P27701 267 aa3.82□□□□□ -1.8
TRAPPC9-216ENST00000634178 HSD17B2P37059 387 aa3.82□□□□□ -1.8
TRAPPC9-216ENST00000634178 CXCL6P80162 114 aa3.82□□□□□ -1.8
TRAPPC9-216ENST00000634178 TLE4Q04727 773 aa3.82□□□□□ -1.8
TRAPPC9-216ENST00000634178 SPAG1Q07617 926 aa3.82□□□□□ -1.8
TRAPPC9-216ENST00000634178 ORC2Q13416 577 aaPredicted RBP3.82□□□□□ -1.8
TRAPPC9-216ENST00000634178 GNMTQ14749 295 aa3.82□□□□□ -1.8
TRAPPC9-216ENST00000634178 OXA1LQ15070 435 aa3.82□□□□□ -1.8
TRAPPC9-216ENST00000634178 AANATQ16613 207 aa3.82□□□□□ -1.8
TRAPPC9-216ENST00000634178 GSG1Q2KHT4 349 aa3.82□□□□□ -1.8
TRAPPC9-216ENST00000634178 C15orf32Q32M92 178 aa3.82□□□□□ -1.8
TRAPPC9-216ENST00000634178 LRRC31Q6UY01 552 aa3.82□□□□□ -1.8
TRAPPC9-216ENST00000634178 FRA10AC1Q70Z53 315 aa3.82□□□□□ -1.8
TRAPPC9-216ENST00000634178 CENPQQ7L2Z9 268 aaPredicted RBP3.82□□□□□ -1.8
TRAPPC9-216ENST00000634178 C17orf82Q86X59 251 aaPredicted RBP3.82□□□□□ -1.8
TRAPPC9-216ENST00000634178 KRTAP7-1Q8IUC3 87 aa3.82□□□□□ -1.8
TRAPPC9-216ENST00000634178 SKA3Q8IX90 412 aa3.82□□□□□ -1.8
TRAPPC9-216ENST00000634178 MAPK1IP1LQ8NDC0 245 aa3.82□□□□□ -1.8
TRAPPC9-216ENST00000634178 PAQR8Q8TEZ7 354 aa3.82□□□□□ -1.8
TRAPPC9-216ENST00000634178 ANKRD49Q8WVL7 239 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms