RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 A0A1B0GX12 115 aa4.26□□□□□ -1.73
SDCBP-213ENST00000630925 SMIM9A6NGZ8 99 aa4.26□□□□□ -1.73
SDCBP-213ENST00000630925 ZNF732B4DXR9 585 aa4.26□□□□□ -1.73
SDCBP-213ENST00000630925 CDIPTO14735 213 aa4.26□□□□□ -1.73
SDCBP-213ENST00000630925 SH2D1BO14796 132 aa4.26□□□□□ -1.73
SDCBP-213ENST00000630925 MSI1O43347 362 aaKnown RBP4.26□□□□□ -1.73
SDCBP-213ENST00000630925 SP1P08047 785 aa4.26□□□□□ -1.73
SDCBP-213ENST00000630925 IL6RP08887 468 aaPredicted RBP4.26□□□□□ -1.73
SDCBP-213ENST00000630925 HIST1H1EP10412 219 aaKnown RBP4.26□□□□□ -1.73
SDCBP-213ENST00000630925 CD1EP15812 388 aa4.26□□□□□ -1.73
SDCBP-213ENST00000630925 ZNF17P17021 662 aa4.26□□□□□ -1.73
SDCBP-213ENST00000630925 CELP19835 753 aa4.26□□□□□ -1.73
SDCBP-213ENST00000630925 GDF1P27539 372 aa4.26□□□□□ -1.73
SDCBP-213ENST00000630925 TALDO1P37837 337 aa4.26□□□□□ -1.73
SDCBP-213ENST00000630925 OR3A3P47888 321 aa4.26□□□□□ -1.73
SDCBP-213ENST00000630925 TTPAP49638 278 aa4.26□□□□□ -1.73
SDCBP-213ENST00000630925 RAB13P51153 203 aa4.26□□□□□ -1.73
SDCBP-213ENST00000630925 VAMP7P51809 220 aa4.26□□□□□ -1.73
SDCBP-213ENST00000630925 CLDN6P56747 220 aa4.26□□□□□ -1.73
SDCBP-213ENST00000630925 KLF5Q13887 457 aaPredicted RBP4.26□□□□□ -1.73
SDCBP-213ENST00000630925 NFATC4Q14934 902 aa4.26□□□□□ -1.73
SDCBP-213ENST00000630925 MAPK14Q16539 360 aa4.26□□□□□ -1.73
SDCBP-213ENST00000630925 FFAR4Q5NUL3 377 aa4.26□□□□□ -1.73
SDCBP-213ENST00000630925 PPM1LQ5SGD2 360 aa4.26□□□□□ -1.73
SDCBP-213ENST00000630925 AGBL4Q5VU57 503 aa4.26□□□□□ -1.73
SDCBP-213ENST00000630925 SHC4Q6S5L8 630 aa4.26□□□□□ -1.73
SDCBP-213ENST00000630925 C1orf229Q6ZS94 237 aaPredicted RBP4.26□□□□□ -1.73
SDCBP-213ENST00000630925 CMTM1Q8IZ96 169 aa4.26□□□□□ -1.73
SDCBP-213ENST00000630925 ABHD12Q8N2K0 398 aa4.26□□□□□ -1.73
SDCBP-213ENST00000630925 D2HGDHQ8N465 521 aa4.26□□□□□ -1.73
SDCBP-213ENST00000630925 ZSCAN4Q8NAM6 433 aaPredicted RBP4.26□□□□□ -1.73
SDCBP-213ENST00000630925 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.26□□□□□ -1.73
SDCBP-213ENST00000630925 TSACCQ96A04 125 aaPredicted RBP4.26□□□□□ -1.73
SDCBP-213ENST00000630925 RERGQ96A58 199 aaPredicted RBP4.26□□□□□ -1.73
SDCBP-213ENST00000630925 NTNG2Q96CW9 530 aa4.26□□□□□ -1.73
SDCBP-213ENST00000630925 SMIM19Q96E16 107 aa4.26□□□□□ -1.73
SDCBP-213ENST00000630925 OR10C1Q96KK4 312 aa4.26□□□□□ -1.73
SDCBP-213ENST00000630925 AIF1LQ9BQI0 150 aa4.26□□□□□ -1.73
SDCBP-213ENST00000630925 NUDT9Q9BW91 350 aa4.26□□□□□ -1.73
SDCBP-213ENST00000630925 NXF5Q9H1B4 397 aaKnown RBP4.26□□□□□ -1.73
SDCBP-213ENST00000630925 OR10A2Q9H208 303 aa4.26□□□□□ -1.73
SDCBP-213ENST00000630925 CXXC4Q9H2H0 198 aa4.26□□□□□ -1.73
SDCBP-213ENST00000630925 UBE2ZQ9H832 354 aaPredicted RBP4.26□□□□□ -1.73
SDCBP-213ENST00000630925 NIPAL2Q9H841 368 aa4.26□□□□□ -1.73
SDCBP-213ENST00000630925 FGF20Q9NP95 211 aaPredicted RBP4.26□□□□□ -1.73
SDCBP-213ENST00000630925 TMEM74BQ9NUR3 256 aa4.26□□□□□ -1.73
SDCBP-213ENST00000630925 SLC38A7Q9NVC3 462 aa4.26□□□□□ -1.73
SDCBP-213ENST00000630925 MOKQ9UQ07 419 aa4.26□□□□□ -1.73
SDCBP-213ENST00000630925 SIRT4Q9Y6E7 314 aaPredicted RBP4.26□□□□□ -1.73
SDCBP-213ENST00000630925 PRUNE2Q8WUY3 3088 aa4.26□□□□□ -1.73
SDCBP-213ENST00000630925 CEP290O15078 2479 aa4.25□□□□□ -1.73
SDCBP-213ENST00000630925 F5H6K3 240 aa4.25□□□□□ -1.73
SDCBP-213ENST00000630925 NUAK1O60285 661 aa4.25□□□□□ -1.73
SDCBP-213ENST00000630925 RP2O75695 350 aa4.25□□□□□ -1.73
SDCBP-213ENST00000630925 CST2P09228 141 aa4.25□□□□□ -1.73
SDCBP-213ENST00000630925 TACSTD2P09758 323 aa4.25□□□□□ -1.73
SDCBP-213ENST00000630925 AKR1C4P17516 323 aa4.25□□□□□ -1.73
SDCBP-213ENST00000630925 GATA3P23771 443 aa4.25□□□□□ -1.73
SDCBP-213ENST00000630925 ERP29P30040 261 aaKnown RBP4.25□□□□□ -1.73
SDCBP-213ENST00000630925 CCR7P32248 378 aa4.25□□□□□ -1.73
SDCBP-213ENST00000630925 TAS2R39P59534 338 aa4.25□□□□□ -1.73
SDCBP-213ENST00000630925 RPS4XP62701 263 aaKnown RBP4.25□□□□□ -1.73
SDCBP-213ENST00000630925 SLC35B1P78383 322 aa4.25□□□□□ -1.73
SDCBP-213ENST00000630925 TRMT5Q32P41 509 aaKnown RBP4.25□□□□□ -1.73
SDCBP-213ENST00000630925 ANXA2RQ3ZCQ2 193 aa4.25□□□□□ -1.73
SDCBP-213ENST00000630925 ZNF672Q499Z4 452 aaPredicted RBP4.25□□□□□ -1.73
SDCBP-213ENST00000630925 SPIN4Q56A73 249 aa4.25□□□□□ -1.73
SDCBP-213ENST00000630925 TREML2Q5T2D2 321 aa4.25□□□□□ -1.73
SDCBP-213ENST00000630925 MED27Q6P2C8 311 aa4.25□□□□□ -1.73
SDCBP-213ENST00000630925 LEG1Q6P5S2 330 aa4.25□□□□□ -1.73
SDCBP-213ENST00000630925 Q6ZT83 130 aa4.25□□□□□ -1.73
SDCBP-213ENST00000630925 ZNF367Q7RTV3 350 aa4.25□□□□□ -1.73
SDCBP-213ENST00000630925 SLC36A1Q7Z2H8 476 aa4.25□□□□□ -1.73
SDCBP-213ENST00000630925 FAM19A1Q7Z5A9 133 aa4.25□□□□□ -1.73
SDCBP-213ENST00000630925 C5orf24Q7Z6I8 188 aa4.25□□□□□ -1.73
SDCBP-213ENST00000630925 COMMD2Q86X83 199 aa4.25□□□□□ -1.73
SDCBP-213ENST00000630925 DEFB123Q8N688 67 aa4.25□□□□□ -1.73
SDCBP-213ENST00000630925 LINC01465Q8N7H1 131 aa4.25□□□□□ -1.73
SDCBP-213ENST00000630925 OR8J3Q8NGG0 315 aa4.25□□□□□ -1.73
SDCBP-213ENST00000630925 OR13D1Q8NGV5 346 aa4.25□□□□□ -1.73
SDCBP-213ENST00000630925 SFXN5Q8TD22 340 aa4.25□□□□□ -1.73
SDCBP-213ENST00000630925 C16orf78Q8WTQ4 265 aa4.25□□□□□ -1.73
SDCBP-213ENST00000630925 UBE2E3Q969T4 207 aa4.25□□□□□ -1.73
SDCBP-213ENST00000630925 EME1Q96AY2 570 aa4.25□□□□□ -1.73
SDCBP-213ENST00000630925 OR14A2Q96R54 314 aa4.25□□□□□ -1.73
SDCBP-213ENST00000630925 KIFC1Q9BW19 673 aa4.25□□□□□ -1.73
SDCBP-213ENST00000630925 ARL6Q9H0F7 186 aa4.25□□□□□ -1.73
SDCBP-213ENST00000630925 SDCBP2Q9H190 292 aa4.25□□□□□ -1.73
SDCBP-213ENST00000630925 RDH14Q9HBH5 336 aa4.25□□□□□ -1.73
SDCBP-213ENST00000630925 ACP6Q9NPH0 428 aa4.25□□□□□ -1.73
SDCBP-213ENST00000630925 TIGARQ9NQ88 270 aa4.25□□□□□ -1.73
SDCBP-213ENST00000630925 IL17CQ9P0M4 197 aa4.25□□□□□ -1.73
SDCBP-213ENST00000630925 PURGQ9UJV8 347 aaKnown RBP4.25□□□□□ -1.73
SDCBP-213ENST00000630925 VPREB3Q9UKI3 123 aa4.25□□□□□ -1.73
SDCBP-213ENST00000630925 MRPS18CQ9Y3D5 142 aaKnown RBP4.25□□□□□ -1.73
SDCBP-213ENST00000630925 CLUHO75153 1309 aa4.25□□□□□ -1.73
SDCBP-213ENST00000630925 TTC28Q96AY4 2481 aa4.25□□□□□ -1.73
SDCBP-213ENST00000630925 ADGRB1O14514 1584 aa4.25□□□□□ -1.73
SDCBP-213ENST00000630925 CENPFP49454 3210 aa4.25□□□□□ -1.73
SDCBP-213ENST00000630925 VPS37CA5D8V6 355 aaPredicted RBP4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms