RNA–Protein interactions for RNA: ENST00000628915.2

R3HDM1-220, Transcript of R3H domain containing 1, humanhuman

TSL 5 BASIC

Gene R3HDM1, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-220ENST00000628915 YBX2Q9Y2T7 364 aaKnown RBP3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 CNTNAP4Q9C0A0 1308 aa3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 PTPRFP10586 1907 aa3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 MYH9P35579 1960 aaKnown RBP3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 SSC5DA1L4H1 1573 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 SAP18O00422 153 aaKnown RBP3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 HSD17B6O14756 317 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 CDC14BO60729 498 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 MOSPD3O75425 235 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 HAND1O96004 215 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 CST1P01037 141 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 LIPCP11150 499 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 IRF2P14316 349 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 CD27P26842 260 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 CNR2P34972 360 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 APLNRP35414 380 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 HCCSP53701 268 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 ERVFC1-1P60608 527 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 PRR5P85299 388 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 GAGE5Q13069 117 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 GAGE6Q13070 117 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 AIMP2Q13155 320 aaKnown RBP3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 MAD2L1BPQ15013 274 aaPredicted RBP3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 TEAD2Q15562 447 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 FBLN7Q53RD9 439 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 GGNBP1Q5YKI7 109 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 TMEM225Q6GV28 225 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 GDPGP1Q6ZNW5 385 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 B3GNT8Q7Z7M8 397 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 RIMKLAQ8IXN7 391 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 SP8Q8IXZ3 490 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 BPIFB2Q8N4F0 458 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 NAT16Q8N8M0 369 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 DUSP18Q8NEJ0 188 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 DNERQ8NFT8 737 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 OR2Z1Q8NG97 314 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 FAM110BQ8TC76 370 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 HPSE2Q8WWQ2 592 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 TEPSINQ96N21 525 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 MBOAT4Q96T53 435 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 NPY6RQ99463 290 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 SDHCQ99643 169 aaPredicted RBP3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 QTRT1Q9BXR0 403 aaKnown RBP3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 C11orf54Q9H0W9 315 aaPredicted RBP3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 GTSF1LQ9H1H1 148 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 FZD8Q9H461 694 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 ZDHHC11Q9H8X9 412 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 LMAN1LQ9HAT1 526 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 NECAP2Q9NVZ3 263 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 RBFOX1Q9NWB1 397 aaKnown RBP3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 VNN3Q9NY84 501 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 BET1LQ9NYM9 111 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 FLRT1Q9NZU1 646 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 NLKQ9UBE8 527 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 ZNF490Q9ULM2 529 aaPredicted RBP3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 MRPS18BQ9Y676 258 aaKnown RBP3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 AKAP9Q99996 3911 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 A0A0U1RRA0 63 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 WDR27A2RRH5 827 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 PRSS37A4D1T9 235 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 IGLON5A6NGN9 336 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 SMIM22K7EJ46 135 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 SGK494L7N484 410 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 FCMRO60667 390 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 IFNA1P01562 189 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 CD22P20273 847 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 MMP11P24347 488 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 ACP1P24666 158 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 SSTR4P31391 388 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 CEACAM6P40199 344 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 WNT4P56705 351 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 RPL32P62910 135 aaKnown RBP3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 ITPRIPL2Q3MIP1 535 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 C1orf220Q5T0J3 134 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 B3GNTL1Q67FW5 361 aaPredicted RBP3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 OR4A47Q6IF82 309 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 Q6ZNB5 142 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 DET1Q7L5Y6 550 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 NUFIP2Q7Z417 695 aaKnown RBP3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 CDC20BQ86Y33 519 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 C2orf73Q8N5S3 287 aaPredicted RBP3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 SLC26A10Q8NG04 563 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 OR4A4PQ8NGN8 299 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 OSTF1Q92882 214 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 RAX2Q96IS3 184 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 KCTD15Q96SI1 283 aaPredicted RBP3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 GLIS2Q9BZE0 524 aaPredicted RBP3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 AMBRA1Q9C0C7 1298 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 OR2D2Q9H210 308 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 S1PR5Q9H228 398 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 UBQLN3Q9H347 655 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 PIGMQ9H3S5 423 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 CLDND1Q9NY35 253 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 PEMTQ9UBM1 199 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 HSPB8Q9UJY1 196 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 RAB22AQ9UL26 194 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 TRAPPC2LQ9UL33 140 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 NDRG4Q9ULP0 352 aaKnown RBP3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 TNFSF18Q9UNG2 199 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 CMAHPQ9Y471 501 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms